prot_H-paniculata_contig10247.170.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10247.170.1
Unique Nameprot_H-paniculata_contig10247.170.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length343
Homology
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: A0A6H5JVI6_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI6_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 6.350e-100
Identity = 220/356 (61.80%), Postives = 252/356 (70.79%), Query Frame = 0
Query:    1 MLSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALSATAEDVLDFVSESKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAFDDDELNLSD-------------LEETLEEGDGNADVFSGQKTLGDLSEARKKDGEELDDERQLMMLQRELQGDRGNAARWGVGEDSMSGSALFKPTPTVAEVRKAQTDELLVKLGGRAELPAQAVRRITRTI 343
            MLSG+GDPSGCGEGFSFL RPAEQ K+ T SLT S+K VA+RSVQKVTGTN DLRRLTM+QLASTCEAMGIPKDTVKTL+RWDRVHMIKELAGVAVAENVKDQNIYARFVRK+RP+AT+DKDLY+ATC EIW+RQA ALSATAEDV ++ SES  SS +             XXXXX                 XXXXXXXXXXXXXXXXX             + D+L+LS              +EETLE GDG+ D     K+L DLS + +K+ +ELDDERQ  MLQ++L G RG AARWG GE     +     +  V E RKAQT+ELL +LGGRA+LPAQAVRRITRT+
Sbjct:  271 MLSGMGDPSGCGEGFSFLPRPAEQAKA-TTSLTTSQKIVAERSVQKVTGTNSDLRRLTMLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAVAENVKDQNIYARFVRKRRPNATIDKDLYRATCNEIWERQALALSATAEDVQEYGSESASSSKAKDKAEASKGKGGEXXXXXVAGASPGGSKDSDKGEEXXXXXXXXXXXXXXXXXLD---------GLNVDDLDLSGDXXXXXXXXXXXXMEETLEGGDGDGDAPVA-KSLQDLSSSSQKNTDELDDERQYRMLQQDLHGVRGEAARWGTGEGP-DAAPQGSMSLNVVEARKAQTEELLGQLGGRAQLPAQAVRRITRTV 614          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 2.860e-98
Identity = 238/356 (66.85%), Postives = 269/356 (75.56%), Query Frame = 0
Query:    1 MLSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALSATAEDVLDFVSESKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAFDDDELNLSDL-------------EETLEEGDGNADVFSGQKTLGDLSEARKKDGEELDDERQLMMLQRELQGDRGNAARWGVGEDSMSGSALFKPTPTVAEVRKAQTDELLVKLGGRAELPAQAVRRITRTI 343
            MLSG+GDPSGCGEGFSFL RPAEQ K+ TASLT S+K VA+RSVQKVTGTN DLRRLTM+QLASTCEAMGIPKDTVKTL+RWDRVHMIKELAGVAVAENVKDQNIYARFVRK+RP+AT+DKDLY+ATC EIW+RQA ALSATAEDV ++ SES  SS +             XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX             + D+L+LS               EETLE GDG+ D     K+L DLS + +K+ +ELDDERQ  MLQ++L G RG AARWG GE S   +     +  V E RKAQT+ELL +LGGRA+LPAQAVRRITRT+
Sbjct: 1057 MLSGMGDPSGCGEGFSFLPRPAEQAKA-TASLTTSQKIVAERSVQKVTGTNSDLRRLTMLQLASTCEAMGIPKDTVKTLRRWDRVHMIKELAGVAVAENVKDQNIYARFVRKRRPNATIDKDLYRATCNEIWERQALALSATAEDVQEYGSESASSSKAKDKVEASKGKGGEXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXXXXXLD---------GLNVDDLDLSGXXXXXXXXXXXXXXEETLEGGDGDGDAPVA-KSLQDLSSSSQKNTDELDDERQYRMLQQDLHGVRGEAARWGTGEGS-DAAPQGSMSLNVVEARKAQTEELLGQLGGRAQLPAQAVRRITRTV 1400          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: A0A835ZI20_9STRA (DUF3591 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI20_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.410e-26
Identity = 64/140 (45.71%), Postives = 85/140 (60.71%), Query Frame = 0
Query:    2 LSGVGDPSG-CGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALS 140
            L+G GDPSG CGEGFSF  +PAE   S      P    + Q +++KVTGT+ DLR+L M +L      +G+ +++V  LKRWDRV MI  +A +AV  N +D    +RF RK R S   +K  Y+    EIW+RQA ALS
Sbjct:    4 LNGTGDPSGGCGEGFSFAQKPAEA--SGPFDNLPKNFQLDQLAIRKVTGTSADLRKLNMRELEKQLVDLGMDRESVAHLKRWDRVQMISHMANMAVTHNTQDAASVSRFTRKPRKSTAGEKKQYRHNIQEIWERQAHALS 141          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: A0A7S2VAC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAC4_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.780e-21
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    2 LSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALS 140
            L+G+GDPSG GEGFSFL R  + + S +              V+K+TGTN DLR+LTM Q+AS   + G+ +  + TLKRWDRVH I++L+  A ++      +  RF R ++   +  K++Y+     IW RQ A+LS
Sbjct:   38 LTGLGDPSGTGEGFSFL-REVDSKPSKSVG-----NAAINAQVKKITGTNDDLRKLTMPQMASVLRSFGMAQKQIDTLKRWDRVHCIRDLSTKAASDGTAGDGL-ERFARGEKLKLSEQKEMYRERIRLIWKRQIASLS 169          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: B7FQ37_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ37_PHATC)

HSP 1 Score: 99.8 bits (247), Expect = 3.140e-19
Identity = 57/139 (41.01%), Postives = 84/139 (60.43%), Query Frame = 0
Query:    2 LSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALS 140
            L+G+GDPSG GEGFSF+ R A+ + S +              V+K+TGT  DLR+LTM Q+AS   + G+ ++ + TLKRWDRVH+I++L+  A ++ + D     RF R ++   +  K +Y+     IW RQ AALS
Sbjct:  826 LTGLGDPSGQGEGFSFI-READSKPSKSVG-----NAALSAEVKKITGTEDDLRKLTMKQMASLLRSYGMTQEKIDTLKRWDRVHVIRDLSTKAASDGIGDG--LERFARGEKMKLSEQKQMYRDRVRVIWRRQIAALS 956          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: A0A1Z5JFQ5_FISSO (Transcription initiation factor TFIID subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFQ5_FISSO)

HSP 1 Score: 99.4 bits (246), Expect = 4.220e-19
Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 0
Query:    2 LSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAAL 139
            L+G+GDPSG GEGFSFL R A+ + S +              ++K+TGT  DLR+LTM Q+A+   + G+P+  + TLKRWDRVH+I++L+  A ++ V D     RF R ++   +  K +Y+     IW RQ A L
Sbjct:  834 LTGLGDPSGMGEGFSFL-READSKPSKSVG-----NAALNSQIKKITGTENDLRKLTMKQMAALLRSYGMPQKKIDTLKRWDRVHVIRDLSTKAASDGVGDG--LERFARGEKMKLSEQKQMYQDRVQVIWKRQLAML 963          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: K0T8U3_THAOC (Bromo domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8U3_THAOC)

HSP 1 Score: 99.4 bits (246), Expect = 4.270e-19
Identity = 56/153 (36.60%), Postives = 87/153 (56.86%), Query Frame = 0
Query:    2 LSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALSATAEDVLDFVSESK 154
            L+G+GDPSG GE +SFL     +    +A++  +        ++K+TGT  DLR+LTM Q+AS  ++  +P   ++ LKRWDRVH+I++L+    ++ + D+    RF R ++   +  +  YK    EIW RQ AAL+AT  D      E K
Sbjct:  928 LTGIGDPSGRGEAYSFLREEGGRGSKSSAAVDGA----LNAQIKKITGTENDLRKLTMKQMASLLQSYNVPSKDIEKLKRWDRVHVIRDLSTKNASDGMGDE--MDRFARTEKTRLSDQRSNYKERIQEIWRRQTAALTATDIDAAAVGMEGK 1074          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: A0A7S4AWQ8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWQ8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 9.650e-19
Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 0
Query:    2 LSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALSATAED 145
            L+G+GDPSG GEGFSFL R A+ + +  A   P  +T     ++K+TGT+ DLR+LTM Q+     + G+ ++ V TLKRWDRVH+I++L+  A ++ + D     RF R ++   +  K +Y+     IW RQ AALS+   D
Sbjct:  516 LTGLGDPSGIGEGFSFL-READTKPNKHAG--PIGQTA---EMKKITGTSDDLRKLTMKQMGRILRSYGMQQNKVDTLKRWDRVHVIRDLSTKAASDGIGDG--LQRFARGEKMKLSEQKQIYRERIQVIWKRQIAALSSGLGD 651          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: A0A2D4C5L0_PYTIN (Transcription initiation factor TFIID subunit 1 puta n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5L0_PYTIN)

HSP 1 Score: 98.2 bits (243), Expect = 1.010e-18
Identity = 59/174 (33.91%), Postives = 91/174 (52.30%), Query Frame = 0
Query:    2 LSGVGDPSGCGEGFSFLLRPAEQRKSLT----ASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALSATA------------EDVLDFVSESKGSSGS 159
            LSG+GDPSG G+GF F+  P  + K       A    ++    Q++V  +TGT  DLR+LTM Q       +G+P   +K L+RWDR+H+++EL+ VA A  V      ++F R  + + +  +  Y+  C  I++RQ   LSAT             ED+LD + E    +G+
Sbjct:  793 LSGIGDPSGRGDGFXFVRAPQTRAKRKDGEDDAPQPGADSARVQKAVAAITGTTADLRKLTMKQAGDVLRNLGVPDGDIKKLRRWDRIHLLRELSNVATA--VGRGGALSKFARTGQKTLSAQQQAYRRKCDVIYERQMNVLSATTTTFSSDEDSSEDEDILDELEEDLVGTGN 964          
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Match: A0A7S2HDX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HDX0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 3.420e-18
Identity = 60/142 (42.25%), Postives = 78/142 (54.93%), Query Frame = 0
Query:    2 LSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGTNGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENVKDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALSATA 143
            L G+GDPSG GEGFSFL RP E  ++ TA     EK + ++S   +  TN DLR+L+M + A+  +  G+P  TV  L+RWDR  MI EL+  A    V       RF R  + S       YK  C  I+ RQA AL +TA
Sbjct:   87 LGGLGDPSGRGEGFSFLRRPIEATRNKTAKQAMKEKHLLEKS-DGLAHTNRDLRKLSMKETANILQNFGVPAHTVANLRRWDRTRMISELSNHASL--VGRAGDMERFTRTNKVSIPHQYAEYKKQCRAIFQRQAEALRSTA 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10247.170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVI6_9PHAE6.350e-10061.80Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIW7_ECTSI2.860e-9866.85Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZI20_9STRA1.410e-2645.71DUF3591 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2VAC4_9STRA4.780e-2140.29Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
B7FQ37_PHATC3.140e-1941.01Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JFQ5_FISSO4.220e-1940.58Transcription initiation factor TFIID subunit 1 n=... [more]
K0T8U3_THAOC4.270e-1936.60Bromo domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S4AWQ8_9STRA9.650e-1940.97Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A2D4C5L0_PYTIN1.010e-1833.91Transcription initiation factor TFIID subunit 1 pu... [more]
A0A7S2HDX0_9STRA3.420e-1842.25Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022591Transcription initiation factor TFIID subunit 1, domain of unknown functionPFAMPF12157DUF3591coord: 2..86
e-value: 3.4E-7
score: 29.3
IPR040240Transcription initiation factor TFIID subunit 1PANTHERPTHR13900TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 2..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10247contigH-paniculata_contig10247:468..8438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10247.170.1mRNA_H-paniculata_contig10247.170.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10247 453..8438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10247.170.1 ID=prot_H-paniculata_contig10247.170.1|Name=mRNA_H-paniculata_contig10247.170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=343bp
MLSGVGDPSGCGEGFSFLLRPAEQRKSLTASLTPSEKTVAQRSVQKVTGT
NGDLRRLTMIQLASTCEAMGIPKDTVKTLKRWDRVHMIKELAGVAVAENV
KDQNIYARFVRKKRPSATVDKDLYKATCIEIWDRQAAALSATAEDVLDFV
SESKGSSGSGGGSSKKGKEKAAANAGSSDADPMEEDDSSGKEKAAGDTDK
DAKGSNDDDDDNDDEEDDDDEPAFDDDELNLSDLEETLEEGDGNADVFSG
QKTLGDLSEARKKDGEELDDERQLMMLQRELQGDRGNAARWGVGEDSMSG
SALFKPTPTVAEVRKAQTDELLVKLGGRAELPAQAVRRITRTI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022591TFIID_sub1_DUF3591
IPR040240TAF1