prot_H-paniculata_contig9254.17044.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9254.17044.1
Unique Nameprot_H-paniculata_contig9254.17044.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length171
Homology
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: D7FXE1_ECTSI (WD repeat-containing protein 60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE1_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 4.900e-39
Identity = 94/194 (48.45%), Postives = 113/194 (58.25%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEVST-DEGGSQTDLGLSPGGRVRLTMSKSIHVGH-------------------SFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFR-----ASRRACGDPCWSG--------GVTCLSFSPFFIKHFLAGCSDGSVRLY 161
            +ASLD RG V IWL +EV   DEGGSQTDLGLSPGGRVRL +SK++  G                    S    +T T  R   +D++ D   +  +A +  A  LAFSP DPNRF++G+S  RV H SRLG PPPPRA+        RR  G    +G        GVTCL+FSPFF K+FLAGC DGSVRLY
Sbjct:  873 VASLDDRGTVSIWLASEVPRGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLAAAVRPRGGGGAVPVSVPRFSTSTRNR---LDQTTDTTASSAAAGS--ARALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRPGERRLDGXXXGTGEEREGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLY 1061          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: A0A7S3XQJ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQJ7_HETAK)

HSP 1 Score: 112 bits (279), Expect = 1.660e-25
Identity = 70/169 (41.42%), Postives = 92/169 (54.44%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEVSTDEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMR-AGDSADTIV-----AHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKV 163
            IA+LD RGV+ +WL+TE+   E G  +DLGLS  G+ RL +S+++ +  S   L       +P   +S  G R A   AD  +     A +LAF P DPNRF+   S G +   +R G+ PPP  FRA             V CL FSPF   +FLAGC DGSVRLY +
Sbjct:  364 IATLDDRGVLALWLVTELEKVELGGSSDLGLSINGQTRLVLSRTLSLDPSIEDL-------NPNKQKSTSGRRTAKTEADASLTPGPCAQSLAFYPKDPNRFIATLSDGSIMQHTRFGNCPPPHHFRAPITFGSFENAPVPVLCLDFSPFLPDYFLAGCMDGSVRLYTI 525          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: F7CGQ3_MONDO (Uncharacterized protein n=5 Tax=Didelphinae TaxID=126287 RepID=F7CGQ3_MONDO)

HSP 1 Score: 103 bits (257), Expect = 1.620e-22
Identity = 61/167 (36.53%), Postives = 93/167 (55.69%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEV-STDEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            IASLD  G + IW++ E+  +D  GSQ+DLGL PGG+++L  S +I + +SF++                   ++  +  T+   T+ F PSDPNRFV+G   G + H +R      P+ F+  +R    P     VT + FSPF    FLAGCSDGS+RL+++ ++
Sbjct:  825 IASLDENGTLNIWVVVELPKSDFAGSQSDLGLIPGGKIKLVHSSTIQLNNSFSS-------------------KSNTNLGTMQTLTVKFLPSDPNRFVIGTDMGVISHGARHDSKVSPKLFKPQQRE-ERPV---KVTVIDFSPFGDPMFLAGCSDGSIRLHQLTSE 968          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: UPI001301E3A4 (WD repeat-containing protein 60 isoform X3 n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=UPI001301E3A4)

HSP 1 Score: 102 bits (255), Expect = 2.760e-22
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEVS-TDEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            IASLD  G++ IW++ E+S  D  GSQ+DLGL PGG+++L  S +I +  SF           P ++ S   M+      T++   + F PSDPNRF++G   G + H +R      P+ F+  +R    P     VT + FSPF    FLAGCSDGS+RL+++ ++
Sbjct:  400 IASLDENGILNIWVVVELSKADFAGSQSDLGLIPGGKIKLVHSSTIQLNSSFP----------PKVNTSLKPMQ------TLI---VKFLPSDPNRFIIGTDMGVISHGARHDSKVSPKLFKPQQRE-ERPV---KVTVIDFSPFGDPMFLAGCSDGSIRLHQLNSE 543          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: G3WJI9_SARHA (Dynein 2 intermediate chain 1 n=2 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WJI9_SARHA)

HSP 1 Score: 102 bits (255), Expect = 3.010e-22
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEVS-TDEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            IASLD  G++ IW++ E+S  D  GSQ+DLGL PGG+++L  S +I +  SF           P ++ S   M+      T++   + F PSDPNRF++G   G + H +R      P+ F+  +R    P     VT + FSPF    FLAGCSDGS+RL+++ ++
Sbjct:  819 IASLDENGILNIWVVVELSKADFAGSQSDLGLIPGGKIKLVHSSTIQLNSSFP----------PKVNTSLKPMQ------TLI---VKFLPSDPNRFIIGTDMGVISHGARHDSKVSPKLFKPQQRE-ERPV---KVTVIDFSPFGDPMFLAGCSDGSIRLHQLNSE 962          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: UPI0010FAA9CF (WD repeat-containing protein 60 n=1 Tax=Scleropages formosus TaxID=113540 RepID=UPI0010FAA9CF)

HSP 1 Score: 100 bits (248), Expect = 2.610e-21
Identity = 68/169 (40.24%), Postives = 88/169 (52.07%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEV-STDEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLA--FSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            +ASLD +GV+ +W++ E+   D+ GSQ DLGL PGG+V+L +S SI            T+ R  P          GDS D    H+L   F PSD N F +  S G V H +R G   PPR ++   RA G       VT L FSPF    FL GC D +VRL+ V T+
Sbjct:  785 LASLDEKGVLNLWVVVELPQADQAGSQNDLGLKPGGKVKLLLSSSII-----------TLERLSP----------GDSTDVGPVHSLLLKFLPSDSNHFFIATSTGLVAHGTRHGPRRPPRFYKP--RAAGPT--PSRVTSLDFSPFGEPLFLVGCDDSTVRLHSVATE 928          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: H0WY81_OTOGA (WD repeat domain 60 n=2 Tax=Otolemur garnettii TaxID=30611 RepID=H0WY81_OTOGA)

HSP 1 Score: 99.8 bits (247), Expect = 3.560e-21
Identity = 65/167 (38.92%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEV-STDEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            IASLD  GV+ +W++ E+   D  GS +DLGL PGGRV+L  S  I +G SF+                   ++  +   T    ++ F PSDPN F+VG   G + H +R G    PRAFR  +  CG       V  + FSPF    FLAGCSDGSVRL+ + ++
Sbjct:  802 IASLDESGVLNMWVVVELPKADIAGSVSDLGLLPGGRVKLVHSAVILLGGSFS-------------------LKGNEFWGTTQTMSVKFLPSDPNHFIVGTDTGLIGHGTRQGVRAAPRAFRPQQ--CG--ARPVTVNAMDFSPFGEPIFLAGCSDGSVRLHGLSSE 945          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: UPI00112AA4DE (WD repeat-containing protein 60 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112AA4DE)

HSP 1 Score: 99.4 bits (246), Expect = 4.840e-21
Identity = 63/167 (37.72%), Postives = 86/167 (51.50%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEVST-DEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            IASLD  G++ +W++ E+ T D  GSQ+DLGL PGGRV+L  S ++H+  SF            P D            +T     + F P D N FV+G   G V H +R G   PP+ +R  +  CG       VT + FSPF    FL GCSDGS+RL+ +  +
Sbjct:  797 IASLDESGILNLWVVIELQTVDPAGSQSDLGLIPGGRVKLVHSSAVHLNSSFF-----------PKD-----------VETPQTLNIKFLPLDSNHFVIGTDIGLVGHGTRHGLRAPPKVYRPQQ--CGSR--PVRVTAIDFSPFGEPVFLVGCSDGSIRLHLMTAE 937          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: A0A6P5KNP1_PHACI (LOW QUALITY PROTEIN: WD repeat-containing protein 60 n=6 Tax=Metatheria TaxID=9263 RepID=A0A6P5KNP1_PHACI)

HSP 1 Score: 99.4 bits (246), Expect = 4.860e-21
Identity = 61/167 (36.53%), Postives = 94/167 (56.29%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEV-STDEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            IASLD  G++ IW++ E+   D  GSQ+DLGL PGG+++L  S +I + +SF           P ++ S   M+      T++   + F PSDPNR+++G   G + H +R      P+ F+  +R    P     VT + FSPF    FLAGCSDGS+RL+++ ++
Sbjct:  825 IASLDENGILNIWVVVELPKVDFAGSQSDLGLIPGGKIKLVHSSTIQLNNSFP----------PKVNTSVRPMQ------TLI---VKFLPSDPNRYIIGTDRGVISHGARHDSKVSPKLFKPQQRE-ERPV---KVTVIDFSPFGEPVFLAGCSDGSIRLHQLNSE 968          
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Match: A0A8J1UCL6_OWEFU (Ofus.G111411 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UCL6_OWEFU)

HSP 1 Score: 98.6 bits (244), Expect = 8.360e-21
Identity = 55/167 (32.93%), Postives = 89/167 (53.29%), Query Frame = 0
Query:    1 IASLDGRGVVFIWLITEVST-DEGGSQTDLGLSPGGRVRLTMSKSIHVGHSFTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGNSFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFLAGCSDGSVRLYKVRTD 166
            +AS++ + V+ +W++ E+ T DE GS++DLGL+PGGR++L  S ++H+ +              P+      +RA         + +   PSDP+ F VG   G V H  R G   PP+ ++    A  +      V CL F+PF    FLAGC+DGS+RL+ + ++
Sbjct:  415 LASMEEQAVLNLWVVAEIVTADEAGSESDLGLAPGGRIKLLKSSAVHLEN--------------PVKTFKASLRA---------YEMQLLPSDPSHFYVGTDSGYVVHGVRYGGKAPPKGYKPEIEAPVE------VFCLDFNPFSFPIFLAGCADGSIRLHNIHSE 552          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9254.17044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE1_ECTSI4.900e-3948.45WD repeat-containing protein 60 n=2 Tax=Ectocarpus... [more]
A0A7S3XQJ7_HETAK1.660e-2541.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F7CGQ3_MONDO1.620e-2236.53Uncharacterized protein n=5 Tax=Didelphinae TaxID=... [more]
UPI001301E3A42.760e-2237.72WD repeat-containing protein 60 isoform X3 n=1 Tax... [more]
G3WJI9_SARHA3.010e-2237.72Dynein 2 intermediate chain 1 n=2 Tax=Sarcophilus ... [more]
UPI0010FAA9CF2.610e-2140.24WD repeat-containing protein 60 n=1 Tax=Scleropage... [more]
H0WY81_OTOGA3.560e-2138.92WD repeat domain 60 n=2 Tax=Otolemur garnettii Tax... [more]
UPI00112AA4DE4.840e-2137.72WD repeat-containing protein 60 n=1 Tax=Rhinatrema... [more]
A0A6P5KNP1_PHACI4.860e-2136.53LOW QUALITY PROTEIN: WD repeat-containing protein ... [more]
A0A8J1UCL6_OWEFU8.360e-2132.93Ofus.G111411 protein n=1 Tax=Owenia fusiformis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..169
e-value: 2.4E-9
score: 38.7
IPR042505WD repeat-containing protein 60PANTHERPTHR16022FAMILY NOT NAMEDcoord: 1..168
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9254contigH-paniculata_contig9254:8317..9513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9254.17044.1mRNA_H-paniculata_contig9254.17044.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9254 8317..9513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9254.17044.1 ID=prot_H-paniculata_contig9254.17044.1|Name=mRNA_H-paniculata_contig9254.17044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
IASLDGRGVVFIWLITEVSTDEGGSQTDLGLSPGGRVRLTMSKSIHVGHS
FTALTTKTITRSPPIDRSADGMRAGDSADTIVAHTLAFSPSDPNRFVVGN
SFGRVHHVSRLGDPPPPRAFRASRRACGDPCWSGGVTCLSFSPFFIKHFL
AGCSDGSVRLYKVRTDECKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR042505WDR60
IPR036322WD40_repeat_dom_sf