prot_H-paniculata_contig9242.17035.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9242.17035.1
Unique Nameprot_H-paniculata_contig9242.17035.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
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BLAST of mRNA_H-paniculata_contig9242.17035.1 vs. uniprot
Match: A0A6H5L2L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L8_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.010e-37
Identity = 86/163 (52.76%), Postives = 101/163 (61.96%), Query Frame = 0 
Query:   33 GVEVYVWRGAESNPQMLELARTGARWLRDYEGWGAGTNTVVVDEGREPLELLRHLEVPGDGEREPPIYGDLTTPSPPTTAARNGPGCLFHHTVPTAYASTAAGGGALSFTPRHANAPLPSPAEAPTLSPMGPTPSPGGGSVGFSPSPY-EIGVSPAGDVRGGM 194
            GV VYVW+GA SN QMLELA+ GARWLRDYEGWG G++  VV+EG+EP E+LRHL+  G   REPP+YGDLT+PSP                                   R  +AP+ SPAE PTLSP+GP+PSPGG  V  SPSPY   GVSPAG  R G+
Sbjct:  597 GVYVYVWKGARSNAQMLELAKEGARWLRDYEGWGVGSSAPVVEEGQEPPEVLRHLDQTGGQAREPPVYGDLTSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMMGR--SAPMLSPAETPTLSPVGPSPSPGG--VSLSPSPYGSTGVSPAGASRFGL 755
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9242.17035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2L8_9PHAE1.010e-3752.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 25..93
e-value: 6.8E-6
score: 28.0
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 33..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9242contigH-paniculata_contig9242:5215..7797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9242.17035.1mRNA_H-paniculata_contig9242.17035.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9242 5215..7797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9242.17035.1 ID=prot_H-paniculata_contig9242.17035.1|Name=mRNA_H-paniculata_contig9242.17035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
GKAKLGLGSATGGRSVEGFLGPAAKAVAAASTGVEVYVWRGAESNPQMLE
LARTGARWLRDYEGWGAGTNTVVVDEGREPLELLRHLEVPGDGEREPPIY
GDLTTPSPPTTAARNGPGCLFHHTVPTAYASTAAGGGALSFTPRHANAPL
PSPAEAPTLSPMGPTPSPGGGSVGFSPSPYEIGVSPAGDVRGGMGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf