prot_H-paniculata_contig923.17024.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig923.17024.1
Unique Nameprot_H-paniculata_contig923.17024.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1517
Homology
BLAST of mRNA_H-paniculata_contig923.17024.1 vs. uniprot
Match: A0A6H5KHC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC8_9PHAE)

HSP 1 Score: 627 bits (1617), Expect = 2.300e-193
Identity = 551/1655 (33.29%), Postives = 754/1655 (45.56%), Query Frame = 0
Query:    1 QSLVPPSIGKQTSTHVTLFWRTTRGQRSIRTEECVNVDNSKEWINLEQDTKRDEDTESRAEKRLSKVQVLEIDHVELQTCLCGCSQCVPGVEIEKGEPTTSTRSKDSIRLGCSACLHCAKEREHAPIRGMGCWRSVYCGTERSCNVRLEQSNALQHFRLFVRARKPPPERRGYMRPMHQDAPHSDANSRSSHSPYFPQXXXXXXXXXXXXXQVQVRLPQAGANQRRQWQLDPSAGVYKSTDSCDVES-TISTLQDGLGRISRGTTF--------YRDSTPPQ------TTAATVMNGGDIMTASDGEPWQWFVSAPVFVGSLPPPVTLHGLGTTLAITWPPLSSFSGLEYVSYILEQWSRPVLQPIESETKLQSPQRQQQKPLTTTTTIGGENHATQDNLEDRGNCTTRQYMRPRSRNRRRCRPRPIAAHGNEAKEVFSVGTRCWFVPTSLVAGNVYRYRLSLLHQRGRSVAGPWASYLSSVPPPRCVDAGARCVLISLPTVC--SAAGSCVGSKRVR--TPEVEGAAKEMLSTAGAIVDTCPEE--SGENQANDISGTDGMGETLSVT--APRSRTNSGELSGEEE-----TGARYQGGNSPWEAEETETPVVRYRLKGLN-GSGRWSLIYQGSDPEVLV-------------------------------------------QGLQPNTFFSIRVTVDVDVMELRRRALGPLSSLSLEPXXXXXXXXAGDAVSRSPPLDRDADRTVNTTSLRTDDTCPETQRRCWRLGEDLPSKNLVQPAARKGVVSTGLGAGGTVSCLRITSP-GDGSGNGSQL--RSRLPWSPSTSPVMSQLKKEGFAVHDAAGTVGSGYYLERP--PWSPLGDAVESCQRDSGVRWDARGLGCVY----TCPNTSEPTVFATALQALFFTSFVLDGVPQVNVWWPTPRQLVDVDTGRRFPLPLRSSTTAPMISFAR-----------KTHSAPQKHSRG---GKKCAHSPTFFPHQQQRQQRQQYPFYVLEALDPVSTDMQP-----VYAGRNQWTNLPRISATLP---------LAPATAYFLKLSAKVSAEQPETEALGVVFTAPPAPVLELVGGGVPSSPSLAEATEENGGHGGDDTLIGVKLKVFWVNAVYKEFLPASKIPLPPVSVALEMSPAWEAGLPDRGAGGIKSRISRSTARPSTTEQAGELTPGGRETQMDVPLSSDGGDREPVDTASDDFSVVRTDAGGGMCWMLDSSTWDRAPEGTPAGAFQIVWRGFDGET-------EAFTPSLPPGMRFAFRMRVECCLGVAYSPATVYQTAFVVPRPPRGLRVSVGTHESRVGRTANCLRLSWGPSEPGHGRNVVTSFTVQARRHCGENGGDI----------------SWHDVCSCPQASCLDPDTLGMPRVTADYRVRGEGPGGCGPWCKPLPVNLVVTEES----LDAASAECTTSVLCKEGSTVATDSLLRRDRTGEPERCPMAYRRSGSTERDSLTGEARRAWGTGKVMGRPLQMRPPSPSVAAAVSGKSLAAAISMKAMASDGLHRRAGGSKQLLWGALASPREEQISRAAAAMKRGGAVGTSDGTNITVAASNGNAGNDQLNNETGCNQCETVVQQSRSF--EVGPMSSEAMPQALAMLLREELDIS 1517
            +SL+PPSI +  S +V L WR   G+ SI+ E   N+  S+EW NL++DT++ +       KR   V++ ++DHVELQTC CGC +C     + +G+          I+    +CL C+  R      G GCWR VY G    C V+L Q N +  FRL VRAR PPP  R +MRP +     SD ++                          + LP    ++RRQ + +  + +  +   CD E+ T+ +    L R    +T         YR S   Q       + +T +      T + G+   WFVS  VFV S PP VTLHG+GT L +TWP L+  +G E VSYILEQWS+       S  +  SP+  Q  P                 L+ R   + R + R  +  R    P+ +     + KE F+VGTRCWF+PT L  G  Y YRLSL+H+ G+ V G W SY +SV PPRC+   +R +++SLP     +A     G  + R  +P+ +  A     +   +     E   S +N A  +   +  G+ L        S  +  E  G  E     T     GG      E+ E P+V Y L+G +    RW  +Y+G  PEV+V                                           QGL+P+     R+ +DVD+ ELR R+LGPL+SL LEP        A  AV+   P+   A  T        +  CP+  +R     +  PS       AR  VV   L           T P G G+ N      R+R  WSP+TSP  S++++EGFA HDA+ TVG G+YLERP   W  L      C    G  W+   +G        C   S    FATA  A  + +FV+   PQV +WW  P+   D+++       +R S+  P  + AR              S P + S     G + A SP            QQ+P + +  L+P +    P     VY+G  QW  L R    L          LAP+TA+ + L    +  QPE+E   VV TAPPAPV+E +   V ++ + AEA  E  G         V LK  W   + + +LPA  I LPP+S+ALEM+   EAGL  RG G   ++ +++    S+   A   T         V +S    +     + + D  V RTDAG G  W L SS+W R      A  F+IVWRG +G         EA  P LPPGMRF FR+RVEC  GVA S +TVY+TA V P  P+GLR  + THESR G  + C+RL W    PGHG NVVTSFTVQARR    +  D                  W DV SCP+  CLDP TLG+P V ADYRVR EGPGG GPWC+PL V+L+V E++    L  +S             +  T +   +++     R PM + R G+  RD LTGEARR     +   RPL++                                 AGGS QLLWGALASPR  +  R    +    A G ++ +    A S    G+D  N+     + E V  +SR+       ++  AMP  LA+LLREELD+S
Sbjct:   19 KSLLPPSIVELNSDNVVLSWRAAIGRCSIQVENPDNISASQEWANLDEDTRKHQHDADGWVKRFGGVKLFDVDHVELQTC-CGCPRC-----LHEGDENGQENEDGDIKGRACSCLCCSSAR-----CGRGCWRPVYQGPHNHCRVQLVQGNRMHFFRLLVRARLPPPNMRNFMRPKNGVVSGSDPDTSGG------------VMQPNDGGSPDLSLP----DRRRQRRRNEYSRI-PTVSCCDPEAVTLLSSSPALARGGSRSTAGGGDAHACYRSSGRSQQRGGVGVSLSTPLGDESRATTAAGKN-VWFVSDSVFVDSRPPAVTLHGIGTALVLTWPALAGLTGGEQVSYILEQWSQATATMTPSVNRT-SPRTDQGVPA---------------ELDGRQK-SPRGHRRHHNHRRHLAPPKQV-----DLKEAFAVGTRCWFMPTGLKTGMRYWYRLSLIHEGGKGVGGMWVSYSTSVIPPRCIGMTSRALVLSLPRALDDTARSGSEGESQDRRNSPDRQHHADHNNKSDEHLPTPRDENRLSVDNDAEHLEALEMDGQRLGTRNLPTGSAGDKTEKHGNAEDVGVTTNQHPNGGE-----EKIEQPMVWYTLEGFSVEEKRWVALYRGPSPEVVVEVQKTTFDVETHLAHLPLLPMLQRSIRLPVDVYRNAGVPPLTQQGLEPSALVRFRLGIDVDITELRHRSLGPLASLELEPTSPDVFGFAATAVA---PVAAAAPTTCG------ESLCPKRTQR----SQTCPSP------ARSAVVRPALRLKSAAEATNQTRPIGHGASNPKTDLGRNRWQWSPATSPAASKMRREGFAFHDASATVGGGFYLERPLLSWGRL-----QCH-SGGAMWECCAIGAGAGEGGQCREYSACVEFATAPLAPRYAAFVVGESPQVKLWWAEPKP--DLESSTAPSAFVRPSSAPPFATPARGRGSHRLALVEAQESPPGRQSISVAVGDRSAVSPY----------AQQHPLFTVTLLEPATDGDHPPLRRRVYSGPQQWLGLGRYPEFLSASGAGVFAELAPSTAFAVGLCTNATDSQPESEVQAVVVTAPPAPVMEPIA--VANNSAAAEAEGEVFG--------AVTLKATWRTDIDQRYLPAG-IDLPPLSIALEMAHVSEAGLSARGVGQTAAKGAQNGQHASSPRTAALAT-------ATVAVSPTSPNTVRPSSGTRDIPV-RTDAGFGQSWTLGSSSWGRLRSW--AEEFEIVWRGEEGGAGKEKGVVEAQLPPLPPGMRFLFRVRVECPFGVAVSASTVYETARVAPLSPKGLRACLTTHESRAGNISRCVRLFWDAFHPGHGINVVTSFTVQARRLRPSSPEDQVTRDANHPHPPPTPAHPWQDVSSCPEIGCLDPATLGVPHVLADYRVRAEGPGGKGPWCEPLRVDLLVQEDTPRNGLCLSSGXXXXXXXXXXAVSSVTFAAAEQEKRHSG-RQPMDFVRPGARARDPLTGEARRRLWANQ---RPLKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGGSNQLLWGALASPRAARGCRVERTLSSRAAPGAAEVSGFNSAIS---GGDDPENSRGPKTEGEHVGPRSRARGGRGERLAVAAMPHELALLLREELDVS 1552          
BLAST of mRNA_H-paniculata_contig923.17024.1 vs. uniprot
Match: D7FTP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP8_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 4.750e-89
Identity = 248/634 (39.12%), Postives = 324/634 (51.10%), Query Frame = 0
Query:  934 YAGRNQWTNLPRI---------SATLPLAPATAYFLKLSAKVSAEQPETEALGVVFTAPPAPVLELVGGGVPSSPSLAEATEENGGHGGDDTLIGVKLKVFWVNAVYKEFLPASKIPLPPVSVALEMSPAWEAGLPDRGAGGIKSRISRSTARPSTTEQAGELTPGGRETQMDVPLSSDGGDREPVDTASDDFSVVRTDAGGGMCWMLDSSTWDRAPEGTPAGAFQIVWRGFDGET-------EAFTPSLPPGMRFAFRMRVECCLGVAYSPATVYQTAFVVPRPPRGLRVSVGTHESRVGRTANCLRLSWGPSEPGHGRNVVTSFTVQARRHCGENGGDI----------------SWHDVCSCPQASCLDPDTLGMPRVTADYRVRGEGPGGCGPWCKPLPVNLVVTEESLDAASAECTTS--------------VLCKEGSTVATDSLLR-RDRTGEPERCPMAYRRSGSTERDSLTGEARRA-WGTGKVMGRPLQMRPPSPSVAAAVSGKSLAAAISMKAMASDGLHRRAGGSKQLLWGALASPREEQISRAAAAMKRGGAVGTSDGTNITVAASNGNAGNDQLNNETGCNQCETVVQQS--RSFEVGPMSSEAMPQALAMLLREELDIS 1517
            Y+G  QW  L R               LA +TA+ + L  K +  QPE+E   VV TAPPAPV+E +   V +  + AEA  E  G         V LK  W   + +  LPA  I LPP+ +ALEM+   EAGL  RG G   +++S++  + S+   A   T         V  +S    R    T +     VRTDAG G  W L SS+W R+   + A  F+IVWRG +G         EA +P LPPGMRF FR+RVEC  GVA S +TVY+TA VVP  P+GLR  + THESR G T+ C+RL W    PGHG+NV+TSFTVQARR    +  D                  W  VCSCP+  CLDP TLG+P V ADYRVR EGPGG GPWC+PL V+L+V E++    +  C  S                C+    V++ + +  +       R PM + R G+  RD LTGEARR  W    V  RPL++ PP  +VA  V   ++  A +     ++   R AGGS QLLWGALASPR  +  R    +    A G +  +    A S    G+D  N+     + E V  +S  R      ++  AMP  LA+LLREELD+S
Sbjct:  748 YSGLRQWLGLGRYPEFFSANGAGVCAELATSTAFAVGLCTKATDSQPESEVQAVVVTAPPAPVMEPIA--VANDSAAAEAEGEVFG--------AVTLKATWRTDIDQRHLPAG-IDLPPLLIALEMAHIPEAGLSARGVGETAAKVSQNGQQASSPGTAALTTATATVDGRAVSPTSPNTARPSSGTQN---IPVRTDAGFGQSWTLGSSSWGRSR--SRAEEFEIVWRGEEGGAGTEKGVVEAQSPPLPPGMRFLFRVRVECRFGVAVSASTVYETAPVVPLSPKGLRACLATHESRAGNTSRCVRLLWDAFHPGHGKNVITSFTVQARRPRPSSPEDQVTRDANHPHPPPTPAHPWQVVCSCPEIGCLDPATLGVPHVLADYRVRAEGPGGKGPWCEPLRVDLLVQEDT--PRNGLCLPSGGXXXXXXXXXXXXXXCESSGAVSSVTFVAAKQEKRHSGRQPMDFVRPGARARDPLTGEARRRLW----VNQRPLKVPPPPAAVATLVLPGAVVTARTRTTAMAEHRCRLAGGSNQLLWGALASPRAARGCRVEGTLSSRAAPGAAGVSGFNRAIS---GGDDPENSRGPKTEGEHVGPRSPARGGRGERLAVAAMPHELALLLREELDVS 1356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig923.17024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHC8_9PHAE2.300e-19333.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTP8_ECTSI4.750e-8939.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1185..1308
e-value: 2.7E-5
score: 26.2
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1202..1313
score: 9.949
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 549..655
score: 6.415
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 1193..1304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig923contigH-paniculata_contig923:6417..15486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig923.17024.1mRNA_H-paniculata_contig923.17024.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig923 6417..15486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig923.17024.1 ID=prot_H-paniculata_contig923.17024.1|Name=mRNA_H-paniculata_contig923.17024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1517bp
QSLVPPSIGKQTSTHVTLFWRTTRGQRSIRTEECVNVDNSKEWINLEQDT
KRDEDTESRAEKRLSKVQVLEIDHVELQTCLCGCSQCVPGVEIEKGEPTT
STRSKDSIRLGCSACLHCAKEREHAPIRGMGCWRSVYCGTERSCNVRLEQ
SNALQHFRLFVRARKPPPERRGYMRPMHQDAPHSDANSRSSHSPYFPQDV
NNQSPHSPHLPQVQVRLPQAGANQRRQWQLDPSAGVYKSTDSCDVESTIS
TLQDGLGRISRGTTFYRDSTPPQTTAATVMNGGDIMTASDGEPWQWFVSA
PVFVGSLPPPVTLHGLGTTLAITWPPLSSFSGLEYVSYILEQWSRPVLQP
IESETKLQSPQRQQQKPLTTTTTIGGENHATQDNLEDRGNCTTRQYMRPR
SRNRRRCRPRPIAAHGNEAKEVFSVGTRCWFVPTSLVAGNVYRYRLSLLH
QRGRSVAGPWASYLSSVPPPRCVDAGARCVLISLPTVCSAAGSCVGSKRV
RTPEVEGAAKEMLSTAGAIVDTCPEESGENQANDISGTDGMGETLSVTAP
RSRTNSGELSGEEETGARYQGGNSPWEAEETETPVVRYRLKGLNGSGRWS
LIYQGSDPEVLVQGLQPNTFFSIRVTVDVDVMELRRRALGPLSSLSLEPA
PSPLPAPAGDAVSRSPPLDRDADRTVNTTSLRTDDTCPETQRRCWRLGED
LPSKNLVQPAARKGVVSTGLGAGGTVSCLRITSPGDGSGNGSQLRSRLPW
SPSTSPVMSQLKKEGFAVHDAAGTVGSGYYLERPPWSPLGDAVESCQRDS
GVRWDARGLGCVYTCPNTSEPTVFATALQALFFTSFVLDGVPQVNVWWPT
PRQLVDVDTGRRFPLPLRSSTTAPMISFARKTHSAPQKHSRGGKKCAHSP
TFFPHQQQRQQRQQYPFYVLEALDPVSTDMQPVYAGRNQWTNLPRISATL
PLAPATAYFLKLSAKVSAEQPETEALGVVFTAPPAPVLELVGGGVPSSPS
LAEATEENGGHGGDDTLIGVKLKVFWVNAVYKEFLPASKIPLPPVSVALE
MSPAWEAGLPDRGAGGIKSRISRSTARPSTTEQAGELTPGGRETQMDVPL
SSDGGDREPVDTASDDFSVVRTDAGGGMCWMLDSSTWDRAPEGTPAGAFQ
IVWRGFDGETEAFTPSLPPGMRFAFRMRVECCLGVAYSPATVYQTAFVVP
RPPRGLRVSVGTHESRVGRTANCLRLSWGPSEPGHGRNVVTSFTVQARRH
CGENGGDISWHDVCSCPQASCLDPDTLGMPRVTADYRVRGEGPGGCGPWC
KPLPVNLVVTEESLDAASAECTTSVLCKEGSTVATDSLLRRDRTGEPERC
PMAYRRSGSTERDSLTGEARRAWGTGKVMGRPLQMRPPSPSVAAAVSGKS
LAAAISMKAMASDGLHRRAGGSKQLLWGALASPREEQISRAAAAMKRGGA
VGTSDGTNITVAASNGNAGNDQLNNETGCNQCETVVQQSRSFEVGPMSSE
AMPQALAMLLREELDIS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf