prot_H-paniculata_contig9139.16959.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9139.16959.1
Unique Nameprot_H-paniculata_contig9139.16959.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length382
Homology
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BLAST of mRNA_H-paniculata_contig9139.16959.1 vs. uniprot
Match: D7FY80_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY80_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 7.680e-32
Identity = 106/208 (50.96%), Postives = 119/208 (57.21%), Query Frame = 0 
Query:  102 RFRKVAARCRAAGCRSRPWFGLSGTKTPKACKLHKADGEVNVYSPTCEQDDCNTRPTYGVDQGCARFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARATHXXXXXXXXXXXXXXXXXXXXXXXXXXSMSATVASLSARSRESERTENLN-------ISVKGPATYCVAHAPKGAMNVSAKRCRHPG-CDIQPTFGHEGRGEPP 301
            R RKV ARCR  GC  RPWF   G++ P+ACK HK +GEVNVY+P CE D C TRP YG D G ARFXX                                    XXXXXXXXXXXXXXXXXXXXXXXXXXS S  VA+  ++  E + TE           +  GPA YC AHAP GA NV+A RCRHPG C +QP FG EG G+ P
Sbjct:   17 RCRKVGARCRFEGCTGRPWFAQPGSRVPRACKAHKEEGEVNVYAPACEADACTTRPHYGADGGRARFXXKHKLDGMVDVLNKRCAKKGCRRQPSWARERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGAVATTKSQPSE-DNTETTAGGAAATAAAHPGPARYCAAHAPAGATNVTASRCRHPGGCSVQPYFGREGGGQQP 223
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9139.16959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY80_ECTSI7.680e-3250.96EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY80... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9139contigH-paniculata_contig9139:3513..7294 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9139.16959.1mRNA_H-paniculata_contig9139.16959.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9139 1826..7558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9139.16959.1 ID=prot_H-paniculata_contig9139.16959.1|Name=mRNA_H-paniculata_contig9139.16959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=382bp
MSTTNTITTTTATITTITRQSRAIPFSITASHENIQTPAKTIKTATSSQQ
ELSKRKRSRKAAIAAPTPAPHSCSPCHPLVSTTTTPDPGLISAPAAAKTG
KRFRKVAARCRAAGCRSRPWFGLSGTKTPKACKLHKADGEVNVYSPTCEQ
DDCNTRPTYGVDQGCARFCRLHKIEGMVDVLNKKCAAEGCRKQPSWAVDR
GARATHCKDHKLEGMVDTKHQTCAHPGCHVFPSMSATVASLSARSRESER
TENLNISVKGPATYCVAHAPKGAMNVSAKRCRHPGCDIQPTFGHEGRGEP
PSCCAQHMESGMTDIRNPRCHAPGCIAQPRCAKEGDPRPTFCLRHAEPDM
INVRHPSARKIVLGNKRKQRQERKGESRVAN*
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