prot_H-paniculata_contig9.16847.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9.16847.1
Unique Nameprot_H-paniculata_contig9.16847.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length455
Homology
BLAST of mRNA_H-paniculata_contig9.16847.1 vs. uniprot
Match: A0A6H5KCA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCA8_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 1.800e-137
Identity = 197/343 (57.43%), Postives = 248/343 (72.30%), Query Frame = 0
Query:  101 RPPANEREKRWAQIPGYNAAMDLAFYSHIHKTSGTSISYFLSEMFPKQSVVPTSHAFRGLNKAQISGKPEPWWDRFQVMFSHNRPNVTAEIEVPESKNVRLLLAVRNPLLHKASIYFESVCRYGLHIKD-GVIDQEEATRARMEAP--YSAHFSFCRDPQLWVGSRQFNTVYRNFQSTWLSYGGAYRHPCIRPELEKSQWN----NAGGGCAAIKERGEDEAIWEEFFERSADAAIRRLEEALWVGVTERMVEASCLLLFTLGKPYHAIGEHRLKQPRPISVWTRESIAKAQRYDKADWRVFEAANDILDLRLWTVKETLKTAGESERERLG-HCFEVLTGAD 435
            R PAN+ ++RW++IP Y    DL F+SHIHKT GTS+   L+ +FP+ ++VPTSH  +GL    + G    WW  FQ+MFSHNR NVT  I +P +K  R+L+ +RNPLLHKASI+FESVCR+G HI D G IDQE AT AR+      +  ++FCRDP++WVGS+QF+ VYRNF++ WLSYG A  HPCIRP+ E ++W     + GG C AIK  G+D  +W  +FER+ADAAIRR+E ALWVGVTERM E+ CLL  TLGK    + +HRLK PRPI+VW  ++  KA  YD+ADWRVFEAAND LDLRLWT +E LK+AGE ER RLG HCF+VL G D
Sbjct:   88 RAPANDVDRRWSEIPLYRPGQDLVFFSHIHKTGGTSL---LANVFPRTALVPTSHPSKGLRVNHLQGHDSEWWKPFQLMFSHNRANVTDTIGIPPTKTPRVLITIRNPLLHKASIFFESVCRFGQHISDNGTIDQEAATLARVNGKGVETEQYNFCRDPEMWVGSKQFDKVYRNFEARWLSYGAAEGHPCIRPDPEFNRWRVDDTDVGGTCKAIKASGQDADVWAAYFERTADAAIRRMEGALWVGVTERMEESLCLLFLTLGKKESEMPQHRLKTPRPITVWHEKAKEKAASYDRADWRVFEAANDFLDLRLWTARERLKSAGEEERARLGDHCFQVLAGKD 427          
BLAST of mRNA_H-paniculata_contig9.16847.1 vs. uniprot
Match: D8LDK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK9_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 8.680e-58
Identity = 127/375 (33.87%), Postives = 181/375 (48.27%), Query Frame = 0
Query:   73 GVVNFETSAGELRLAARKG---LIPHCGLGPRPPAN---------EREKRWAQIPGYNAAMDLAFYSHIHKTSGTSISYFLSEMFPKQSVVPTSHAFRGLNKAQISGKPEPWWDRFQ-VMFSHNRPNVTAEIEVPESKNVRLLLAVRNPLLHKASIYFESVCRYGLHIKDGVIDQEEATRARMEAPYSAHFSFCRDPQLWVGSRQFNTVYRNFQSTWLSYGGAYRHPCIRPELEKSQWNNAGGGCAAIKERGEDEAIWEEFFERSADAAIRRLEEALWVGVTERMVEASCLLLFTLGKPYHAIGEHRLKQPRPISVWTRESIAKAQRYDKADWRVFEAANDILDLRLWTVKETLKTAGESERERLG-HCFEVLTG 433
            G +N      E   + RK    L+     GPRPP+N         +RE++WA++P Y+    L F++HI KTSGTS+S+ L ++F +++VVPTSH    +   ++ G  + WW  ++ V ++HN           E K             H+        C YG                                                            H  ++PE  K   ++    C ++K  G+  AI EE+++R A++AI+RL + LWVGVTER  EA CLL  TLGK    +G +R K+PRPISVW   +++K  +YD+ADW+VF AANDILDLR+WT +E LK AGE E ERLG HC  V+ G
Sbjct:    5 GGLNVGQQQSEQPASRRKQQTILVAGGSRGPRPPSNHLGLRWFKQDRERKWAELPEYHPDEHLLFFAHIIKTSGTSLSFVLRDIFGEEAVVPTSHESGYMKLGEVQGHDDNWWAPYEAVTYAHNE----------EDK-------------HR--------CVYG------------------------------------------------------------HAWVKPE--KGGDHHDEESCNSLKASGKHNAILEEYYDRMAESAIKRLGDGLWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAGEEELERLGKHCVNVING 286          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9.16847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCA8_9PHAE1.800e-13757.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDK9_ECTSI8.680e-5833.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..454
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9contigH-paniculata_contig9:32568..60174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9.16847.1mRNA_H-paniculata_contig9.16847.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9 32408..61729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9.16847.1 ID=prot_H-paniculata_contig9.16847.1|Name=mRNA_H-paniculata_contig9.16847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=455bp
MPSSSGIDNAVPMWHRLLSGCQRGRRSLSHICRVVFTGAVACGGLLCVVV
HVIQLGNRDGRLDSGIAAAGDDGVVNFETSAGELRLAARKGLIPHCGLGP
RPPANEREKRWAQIPGYNAAMDLAFYSHIHKTSGTSISYFLSEMFPKQSV
VPTSHAFRGLNKAQISGKPEPWWDRFQVMFSHNRPNVTAEIEVPESKNVR
LLLAVRNPLLHKASIYFESVCRYGLHIKDGVIDQEEATRARMEAPYSAHF
SFCRDPQLWVGSRQFNTVYRNFQSTWLSYGGAYRHPCIRPELEKSQWNNA
GGGCAAIKERGEDEAIWEEFFERSADAAIRRLEEALWVGVTERMVEASCL
LLFTLGKPYHAIGEHRLKQPRPISVWTRESIAKAQRYDKADWRVFEAAND
ILDLRLWTVKETLKTAGESERERLGHCFEVLTGADDKQADAPGSEERNVE
RITP*
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