mRNA_H-paniculata_contig845.16447.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: G7E3S6_MIXOS (Integrase catalytic domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E3S6_MIXOS) HSP 1 Score: 145 bits (366), Expect = 6.880e-36 Identity = 87/263 (33.08%), Postives = 149/263 (56.65%), Query Frame = 1
Query: 1 NAQRTEASPEWKHWQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYREFPGA---VGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVFRKIV---VIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERFGI 771
N + ASP+ +W+ A + + + + N VW E + + T ++ K+ E G+V +YK+RLVA G RQI GV + E S+ S + +TVL+LAA +D+EL D A+L +P+++ I+++ +Y PG V +L KA YGL QAG W ++ L A G +Q ADP+++ K + ++V I+Y+ DLLI++ + EL+ L + K +G+ K +LG ++R+R I + + +YA+ + + G+
Sbjct: 766 NVKEALASPQADYWKDAMDAEYESMAANKVWELVELPPGRKAIDTLFVFATKVDEKGEVYRYKARLVAKGYRQIPGVDYFETSASVASLPAVRTVLALAASRDYELIQADITSAFLNSPLEEDIYIKQQADYT-VPGQETLVCKLKKAIYGLKQAGLAWVNTLSERLIAFGLDQTEADPNIYTKPIGDDLLVLIVYVDDLLIASPTQSLAWELVDFLAQTFQFKRIGEPKKFLGIELSRNRAARTISLRQSVYAQDIVSKAGL 1027
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A8J4AXG8_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXG8_9CHLO) HSP 1 Score: 143 bits (360), Expect = 4.480e-35 Identity = 85/253 (33.60%), Postives = 142/253 (56.13%), Query Frame = 1
Query: 25 PEWKHWQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYRE-FPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVFRKIVV---IVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERFGI 771
PE W++A + +M + N VWT E K ++ +Y K E G + +YK+RLVA G Q++GV + E +P + + +L++ A +D EL +D A+L A +++ ++V+ Y E PG +L KA YGL QA R W + L + GF+ ADP +F K V+ + ++Y+ DLLI++ PE++ + A L S ++DLG+A+ +LG I R+R +K+ + +AR + E+FG+
Sbjct: 1000 PEASMWKQAMDEEMASIRSNQVWTLEVPPKGVRPLAVKWVYTVKRDEQGDILRYKARLVAKGYTQVEGVDYDEVYAPVSKHATLRALLAVVAERDLELHQLDVGTAFLNAKLEEVVYVQQAPGYTEGIPGMACKLQKALYGLKQAPRAWYGCLKEQLISMGFQVSDADPGLFYKDVLGDRVYVLVYVDDLLIASSNPEVIRQFKAKLMSIFSVRDLGEARVFLGYEIERNRMEGTLKLSQQQFARKVVEKFGL 1252
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI) HSP 1 Score: 140 bits (353), Expect = 2.750e-34 Identity = 80/247 (32.39%), Postives = 136/247 (55.06%), Query Frame = 1
Query: 40 WQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYREFPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVF---RKIVVIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERFGI 771
W RA E + L+ N + + K +S +YK K E + +YK+RLV G Q+ G+ FQE SP +S + ++S+AA++DW++ H+D + AYL ++++I+V P + E G V RL KA YGL QAGRCW+ KIT L F + +DP +F + +++ +++ D+++ + ++ + L ++KDLG LG ++TRDR ++ ID+ Y + +RF +
Sbjct: 240 WDRAMEEERNSLVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSM 484
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI) HSP 1 Score: 140 bits (353), Expect = 3.780e-34 Identity = 80/247 (32.39%), Postives = 136/247 (55.06%), Query Frame = 1
Query: 40 WQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYREFPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVF---RKIVVIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERFGI 771
W RA E + L+ N + + K +S +YK K E + +YK+RLV G Q+ G+ FQE SP +S + ++S+AA++DW++ H+D + AYL ++++I+V P + E G V RL KA YGL QAGRCW+ KIT L F + +DP +F + +++ +++ D+++ + ++ + L ++KDLG LG ++TRDR ++ ID+ Y + +RF +
Sbjct: 845 WDRAMEEERNSLVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSM 1089
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A7S2ZD23_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZD23_9RHOD) HSP 1 Score: 137 bits (344), Expect = 5.270e-33 Identity = 83/249 (33.33%), Postives = 143/249 (57.43%), Query Frame = 1
Query: 19 ASPEWKHWQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYREFPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVFRKIVVIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERF 765
A P ++W+ A +++ L WT +R K K V+ + ++K K + G+ K+K RLVA G +Q HF + SP S S + +LS+AA ++++++ +D AYL ++++I++E+P + G V +L + YGL Q+G+ W K+ DL KGF ADP VF K + V ++Y+ D L+ ++ + A LR +K+KDLG+A+ YLG I+RD+T + +K+ + Y + + E +
Sbjct: 409 AGPHAQYWEEAIADELESLSKFQTWTLVDRPKDKQVLGSKFVFKVKTNQSGEPLKFKVRLVARGFQQN---HFTDVYSPTVSFDSIRVILSIAAQRNYDIQQMDVSTAYLNGELNEEIYMEMPPG-NQTTGKVCKLNRGLYGLKQSGKIWYEKLRNDLQRKGFYATTADPCVFVKDNIYV-LVYVDDFLLVGNKKDVQ-QAKAQLREMYKMKDLGEAREYLGIEISRDKTTSTVKLGQPKYIQKILEEY 651
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE) HSP 1 Score: 134 bits (337), Expect = 2.370e-32 Identity = 79/219 (36.07%), Postives = 123/219 (56.16%), Query Frame = 1
Query: 127 VSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYREFPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVFRK----IVVIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERFGI 771
VS + K +GK+ K+K+RLVA G +I V + +SSP PS+ S K +L++A + L H D ++AY A +D++IF+ +P + +G+ +A YGL Q+GR W L GFEQ ADP VFRK +VV++ +IY+ D+L++ + E ELLA L+ K+LG+ + + C I RD +KI + Y +M +RF +
Sbjct: 207 VSPKWCFSWKTNNEGKIHKFKARLVARGFSKIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLVA-ESDEDCEELLASLKKKFPTKNLGECEWFHRCAIERDVEAGTLKISQTTYIDNMVKRFDV 424
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A6D2I001_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I001_9BRAS) HSP 1 Score: 133 bits (335), Expect = 5.660e-32 Identity = 79/227 (34.80%), Postives = 124/227 (54.63%), Query Frame = 1
Query: 40 WQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYREFPGA---VGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVF---RKIVVIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRD 702
W+ A V++ L +N WT EE K + + +YK K DG +E YK+RLVA GNRQI G + E +P + + L +AA +W + +D A+L + ++++++ P + FP V RL K+ YGL QA RCW K+T L GF+Q HAD S+F R + I +IY+ D++++ + + + L S K+KDLG K++LG + R+
Sbjct: 358 WRHAMRVEVDALEENQTWTLEELPPGKRAIGSKWVYKIKYNSDGTIECYKARLVALGNRQIAGEDYCETFAPVAKMGTVRLFLKVAAGNNWPVYQMDVHNAFLHGDLQEEVYMKPPPGF--FPEGDTRVCRLRKSIYGLKQASRCWFAKLTTSLREYGFQQTHADYSLFTFDRNGIKIRMLIYVDDMILTGNNEKALQDFKTYLSSCFKMKDLGHLKYFLGIEVARN 582
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A150G7P2_GONPE (Integrase catalytic domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7P2_GONPE) HSP 1 Score: 134 bits (336), Expect = 5.970e-32 Identity = 79/262 (30.15%), Postives = 142/262 (54.20%), Query Frame = 1
Query: 1 NAQRTEASPEWKHWQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPI-DQQIFV-EIPVEYREFPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVFRKIVV---IVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERFGI 771
N + ++ P+W W++A + ++ L N WT + S+ V+ ++ + G +E+YK+RLVA G Q+ G+ F E +P + + LS+ A++D EL +D + A+L + D + V ++P + RL KA YGL QA R W ++ ++L A GF+ +DP +F K + ++Y+ DLLI+ E + ++ + L S +++DLG+A+ +LG I RDR +K+ + YA ++ +FG+
Sbjct: 510 NIEEAKSRPDWPMWKKACDEEIASLYCNNTWTLVQVSRATRVIGVKWVFSYEFDASGNIERYKARLVAKGYSQVAGIDFDEVFAPVSKHATLRAFLSVVAVRDLELHQLDVKTAFLNGELEDDDLHVAQLPGYEQGGRDTACRLNKALYGLRQASRTWYERLRSELKAMGFKPSESDPGLFVKEEDGDRVFLLVYVDDLLIAAMKLETVAQIKSRLMSKFEIRDLGEARFFLGYEIERDRAARTLKLSQKRYAETVLAKFGM 771
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A5N6PPX5_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PPX5_9ASTR) HSP 1 Score: 133 bits (335), Expect = 9.570e-32 Identity = 78/237 (32.91%), Postives = 125/237 (52.74%), Query Frame = 1
Query: 1 NAQRTEASPEWKHWQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYRE--FPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVF---RKIVVIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHIT 696
N + +++ + HW A ++ L N W R VV + L++ K DG +++YK+RLVA G Q+ G+ + SP AT+ + VLSLA + +W+LR +D A+L I +++F+E P + FP V L KA YGL QA R W +++ L GF AD S+F K +I I+Y+ D++++ E + +A L S+ +KDLG ++LG +T
Sbjct: 895 NPKGVKSASKHSHWIEAMNHELNALYKNDTWVLVPRPATHNVVGSKWLFRTKFRADGSIDRYKARLVAQGYSQVPGLDYSHTFSPVVKATTVRVVLSLAVVNNWKLRQLDVNNAFLHGKITERVFMEQPPGFANPHFPNHVCLLKKAIYGLKQAPRAWFDRLSTFLLQCGFSCSRADASLFVYNHKGCLIYLIVYVDDIIVTGNNDEFISSFVAKLHSEFAIKDLGSLNYFLGLEVT 1131
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Match: A0A5H2YCK7_PRUDU (Transposable element protein n=3 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2YCK7_PRUDU) HSP 1 Score: 133 bits (334), Expect = 1.150e-31 Identity = 80/249 (32.13%), Postives = 138/249 (55.42%), Query Frame = 1
Query: 40 WQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKRKIGEDGKVEKYKSRLVAHGNRQIKGVHFQEASSPAPSATSAKTVLSLAAIQDWELRHVDFEKAYLQAPIDQQIFVEIPVEYRE--FPGAVGRLGKANYGLVQAGRCWSMKITADLTAKGFEQLHADPSVFRKIV---VIVTIIYMADLLISTKGPEIMHELLADLRSDHKLKDLGDAKHYLGCHITRDRTMTKIKIDRHLYARSMAERFGI 771
WQ+A ++Q L G W K +V +YK K DG++ +YK+RLVA G Q +G+ F E SP T+ + +LSLAA W LR +D + A+L + ++++++ P+ + + +P V RL K+ YGL QA R W+ K T L A GF H+DPS+F K V++ ++Y+ D++I+ ++ ++ DL +KD+G ++LG ++ + + +++ YAR + +R G+
Sbjct: 412 WQQAMIEEIQALQTQGTWDLVPPPSDKNIVGCRWIYKIKRHADGRIARYKARLVAQGFSQEQGIDFDETFSPVVRHTTVRLILSLAASHRWCLRQLDVKNAFLHGDLQEEVYMKQPLGFIDDHYPDYVCRLRKSLYGLKQAPRAWNAKFTRYLPALGFVSSHSDPSLFVKHDGPNVVILLLYVDDIIITGSSSTLVQSVIDDLGQVFDMKDIGQLTYFLGLEVSYQ-SNGDLFVNQAKYARDLLKRAGM 659 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig845.16447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig845.16447.1 >prot_H-paniculata_contig845.16447.1 ID=prot_H-paniculata_contig845.16447.1|Name=mRNA_H-paniculata_contig845.16447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=257bp NAQRTEASPEWKHWQRAEEVKMQGLIDNGVWTQEERSKKKLVVSTTMLYKback to top mRNA from alignment at H-paniculata_contig845:30739..31521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig845.16447.1 ID=mRNA_H-paniculata_contig845.16447.1|Name=mRNA_H-paniculata_contig845.16447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=783bp|location=Sequence derived from alignment at H-paniculata_contig845:30739..31521+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig845:30739..31521+ >mRNA_H-paniculata_contig845.16447.1 ID=mRNA_H-paniculata_contig845.16447.1|Name=mRNA_H-paniculata_contig845.16447.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at H-paniculata_contig845:30739..31521+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |