prot_H-paniculata_contig8371.16385.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8371.16385.1
Unique Nameprot_H-paniculata_contig8371.16385.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8371.16385.1 vs. uniprot
Match: A0A6H5KCT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT0_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.990e-10
Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:    2 GGEWVLPRAGPVQDWAAAVAFGSWEEARRLLTPNEGDLRTLTGDA--LTAAVAELDSLARRARQVERILQGSV 72
            GGEW+LPRA PVQ+WAAAVA  +W+EA  L              A  L      L++LARR+RQ ERIL+ S+
Sbjct:  856 GGEWMLPRARPVQEWAAAVALEAWDEASSLTAALHAPPGASWPSAPWLDDVAVTLEALARRSRQAERILEASI 928
[Close]
BLAST of mRNA_H-paniculata_contig8371.16385.1 vs. uniprot
Match: D7FN13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN13_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 5.050e-10
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:    2 GGEWVLPRAGPVQDWAAAVAFGSWEEARRL----LTPNEGDLRTLTGDALTAAVAELDSLARRARQVERILQGS 71
            GGEW+LPRA PVQ+WAAAVA  +W+EA  L    L P      ++    L      L++LARR+RQ ERIL+ S
Sbjct:  711 GGEWMLPRARPVQEWAAAVALEAWDEASSLAAALLAPPGASWPSVPW--LDDVAVTLEALARRSRQAERILEAS 782
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8371.16385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCT0_9PHAE1.990e-1047.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN13_ECTSI5.050e-1048.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8371contigH-paniculata_contig8371:5965..7004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8371.16385.1mRNA_H-paniculata_contig8371.16385.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8371 5965..7004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8371.16385.1 ID=prot_H-paniculata_contig8371.16385.1|Name=mRNA_H-paniculata_contig8371.16385.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
GGGEWVLPRAGPVQDWAAAVAFGSWEEARRLLTPNEGDLRTLTGDALTAA
VAELDSLARRARQVERILQGSVVSQPPPPPY*
back to top