prot_H-paniculata_contig828.16300.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig828.16300.1
Unique Nameprot_H-paniculata_contig828.16300.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
[Close]
BLAST of mRNA_H-paniculata_contig828.16300.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.840e-8
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:   26 SRCLDAFTVVLNEAYSGKVPYVSTKSLQLVSLQFCITCRSVSTLQVK 72
            SRCLDAF V LN+A  G   YVST+ LQL SL FC+ CRSV T+ +K
Sbjct:   28 SRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLK 74
[Close]
BLAST of mRNA_H-paniculata_contig828.16300.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 2.090e-5
Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:   34 VVLNEAYSGKVPYVSTKSLQLVSLQFCITCRSVSTL 69
            V LNE Y GK  Y+ST  LQL S++FC+ CRSVSTL
Sbjct:    2 VALNETYGGKQWYISTVQLQLASVEFCVACRSVSTL 37
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig828.16300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFC0_9PHAE1.840e-861.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG83_9PHAE2.090e-563.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig828contigH-paniculata_contig828:2630..3178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig828.16300.1mRNA_H-paniculata_contig828.16300.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig828 2630..6438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig828.16300.1 ID=prot_H-paniculata_contig828.16300.1|Name=mRNA_H-paniculata_contig828.16300.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
MDALSNRSESGAAEAENSRNEENRTSRCLDAFTVVLNEAYSGKVPYVSTK
SLQLVSLQFCITCRSVSTLQVKLTM
back to top