prot_H-paniculata_contig828.16302.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig828.16302.1
Unique Nameprot_H-paniculata_contig828.16302.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length184
Homology
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BLAST of mRNA_H-paniculata_contig828.16302.1 vs. uniprot
Match: A0A7S2ATP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATP2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.550e-7
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:  120 EIIRMASQYTPCAGCSAAVKGLLQRPIEELRLVNAVMEE 158
            EI+R+A+QYT CAGC AA+  LL+RP+ +LRL+NAVM+E
Sbjct:    1 EIVRLAAQYTTCAGCCAALGSLLKRPLSDLRLLNAVMKE 39
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BLAST of mRNA_H-paniculata_contig828.16302.1 vs. uniprot
Match: W7TQZ3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQZ3_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.190e-6
Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:  114 VKIERAEIIRMASQYTPCAGCSAAVKGLLQRPIEELRLVNAVMEERKEVDGP 165
            + ++++++I ++SQY+ CAGC AAVK LL RP+ ELRL+NAVM      DGP
Sbjct:   96 ILVDKSQLINLSSQYSTCAGCLAAVKMLLSRPLSELRLLNAVM-----ADGP 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig828.16302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2ATP2_9STRA1.550e-764.10Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TQZ3_9STRA1.190e-651.92Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig828contigH-paniculata_contig828:15912..16463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig828.16302.1mRNA_H-paniculata_contig828.16302.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig828 15912..18891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig828.16302.1 ID=prot_H-paniculata_contig828.16302.1|Name=mRNA_H-paniculata_contig828.16302.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
MRGGSPNGMAPLCVKDRRKAQAAAVAAAADASAGRSGENGHVVGCKGSVA
GRGNGHNNAKRSCSVGCSGLSGAASSGSARGSGGGDGRNNRTGVGSECTG
GARGSHINSEPPVVKIERAEIIRMASQYTPCAGCSAAVKGLLQRPIEELR
LVNAVMEERKEVDGPMGGSNRRSKRGRGGGGRMG
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