prot_H-paniculata_contig8273.16293.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8273.16293.1
Unique Nameprot_H-paniculata_contig8273.16293.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: A0A8F0K0X7_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K0X7_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 4.880e-45
Identity = 71/78 (91.03%), Postives = 73/78 (93.59%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIETI LFPWAIT SQLPSLGYWSMMDFL ELVVGFIYAW IGSLEW
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAITLSQLPSLGYWSMMDFLLELVVGFIYAWQIGSLEW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: A0A0U1XDC4_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDC4_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.050e-44
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIETI LFPWA++ SQLPS+GYWSMMDFLFELVVGFIYAW IGSL+W
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: Q94YZ1_PYLLI (NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ectocarpales TaxID=2877 RepID=Q94YZ1_PYLLI)

HSP 1 Score: 147 bits (372), Expect = 2.050e-44
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIETI LFPWA++ SQLPS+GYWSMMDFLFELVVGFIYAW IGSL+W
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: A0A4Y5T7V9_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7V9_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 4.130e-44
Identity = 67/78 (85.90%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIET+ +FPWAI+ SQ+PS+GYWSMMDFLFELVVGFIYAW IGSLEW
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAISLSQMPSIGYWSMMDFLFELVVGFIYAWKIGSLEW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: Q2TU99_DICDH (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU99_DICDH)

HSP 1 Score: 146 bits (369), Expect = 5.690e-44
Identity = 66/78 (84.62%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIET+ +FPWA++ SQLPS+GYWSMMDFLFEL+VGFIYAW IGSLEW
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAVSLSQLPSVGYWSMMDFLFELIVGFIYAWKIGSLEW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: E6ZET4_ECTSI (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET4_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.680e-43
Identity = 66/78 (84.62%), Postives = 74/78 (94.87%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIETI LFPW+++ SQLPS+GYWSM+DFLFELVVGFIYAW IGSL+W
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: A0A0U1WNN7_SARFS (NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN7_SARFS)

HSP 1 Score: 139 bits (351), Expect = 3.250e-41
Identity = 63/78 (80.77%), Postives = 72/78 (92.31%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIET+ +FPWA + SQLP +GYWS++DFLFELVVGFIYAW IGSL+W
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFIFPWAASLSQLPPVGYWSVIDFLFELVVGFIYAWQIGSLDW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: A0A8E8U4L6_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4L6_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.250e-41
Identity = 61/78 (78.21%), Postives = 72/78 (92.31%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFLLFDIET+ LFPW +T S+LP++GYWSM+DF+ ELV+GFIYAW IGSL+W
Sbjct:   42 SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWVVTLSELPAVGYWSMVDFIIELVIGFIYAWQIGSLDW 119          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: A0A7S6UA31_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA31_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.780e-36
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAI-TSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDARNAFDVRFY+VAILFL+FD+E + LFPWA+    Q  SLG WSM+DFLFEL+VGF+YAW IGSL+W
Sbjct:   44 SSYECGFDPYEDARNAFDVRFYLVAILFLIFDLEAVFLFPWAVGLGQQSTSLGLWSMIDFLFELLVGFVYAWQIGSLDW 122          
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Match: A0A0K2RWM0_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWM0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.530e-35
Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPSLGYWSMMDFLFELVVGFIYAWLIGSLEW 78
            S +ECGFDPYEDAR+ FDVRFY+VAILF++FDIE + LFPWA++  Q+ SLG+WSM+DF+ EL VGFIYAW IG+LEW
Sbjct:   45 SAYECGFDPYEDARHTFDVRFYLVAILFIIFDIEAMFLFPWAVSLDQIGSLGFWSMVDFILELGVGFIYAWKIGALEW 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8273.16293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0K0X7_9PHAE4.880e-4591.03NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pro... [more]
A0A0U1XDC4_9PHAE2.050e-4487.18NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Ph... [more]
Q94YZ1_PYLLI2.050e-4487.18NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ect... [more]
A0A4Y5T7V9_9PHAE4.130e-4485.90NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
Q2TU99_DICDH5.690e-4484.62NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
E6ZET4_ECTSI1.680e-4384.62NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ect... [more]
A0A0U1WNN7_SARFS3.250e-4180.77NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sa... [more]
A0A8E8U4L6_9PHAE3.250e-4178.21NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pha... [more]
A0A7S6UA31_9STRA3.780e-3673.42NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Sch... [more]
A0A0K2RWM0_9STRA1.530e-3570.51NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Tri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyGENE3D1.20.58.1610coord: 1..78
e-value: 1.0E-28
score: 101.7
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PFAMPF00507Oxidored_q4coord: 2..78
e-value: 1.1E-27
score: 96.1
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PANTHERPTHR11058NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 1..78
NoneNo IPR availablePANTHERPTHR11058:SF9NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 1..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 19..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..78
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8273contigH-paniculata_contig8273:2645..2881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8273.16293.1mRNA_H-paniculata_contig8273.16293.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8273 2645..2881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8273.16293.1 ID=prot_H-paniculata_contig8273.16293.1|Name=mRNA_H-paniculata_contig8273.16293.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
SHFECGFDPYEDARNAFDVRFYIVAILFLLFDIETITLFPWAITSSQLPS
LGYWSMMDFLFELVVGFIYAWLIGSLEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038430NDAH_ubi_oxred_su3_sf
IPR000440NADH_UbQ/plastoQ_OxRdtase_su3