prot_H-paniculata_contig8270.16291.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8270.16291.1
Unique Name	prot_H-paniculata_contig8270.16291.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	106

Homology

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: D7G160_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G160_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 1.600e-43
Identity = 75/103 (72.82%), Postives = 84/103 (81.55%), Query Frame = 0

Query:    1 MAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRAGIVPILLK 103
            MAV R+RVPVVK   PRRLWGP GR    DISVNNLVA+HNT+L+  YTD+DPRCHR+LYLVK WAKARGV DS+ GTLSSYGHC+  LHYL R G+VP LLK
Sbjct:  556 MAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSKGTLSSYGHCLTVLHYLTRVGVVPSLLK 658

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A6H5K7K2_9PHAE (NTP_transf_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K2_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.670e-43
Identity = 75/103 (72.82%), Postives = 84/103 (81.55%), Query Frame = 0

Query:    1 MAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRAGIVPILLK 103
            MAV R+RVPVVK   PRRLWGP GR    DISVNNLVA+HNT+L+  YTD+DPRCHR+LYLVK WAKARGV DS+ GTLSSYGHC+  LHYL R G+VP LLK
Sbjct:  564 MAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSKGTLSSYGHCLTVLHYLTRVGVVPSLLK 666

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A072TP93_MEDTR (Nucleotidyltransferase family protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072TP93_MEDTR)

HSP 1 Score: 86.3 bits (212), Expect = 9.460e-18
Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 0

Query:    2 AVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPIL 101
            A+ RARVP+VK++ P       G  C  DI +NNL+A+ NTKLL  Y +IDPR  ++ +++K WAK+RGVN++  GTLSSY + +  +H+L   R  I+P L
Sbjct:  135 ALTRARVPIVKLMDP-----VTGISC--DICINNLLAVVNTKLLRDYANIDPRLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCVHFLQQQRPAILPCL 229

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: UPI00125D171C (UTP:RNA uridylyltransferase 1 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D171C)

HSP 1 Score: 86.7 bits (213), Expect = 1.320e-17
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 0

Query:    2 AVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRA--GIVPIL 101
            A+ RARVP+VK++ P       G   S DI VNNL+A+ NTKLL  Y+ ID R  ++ ++VK WAK+RGVN++  GTLSSY + +  +H L R    I+P L
Sbjct:  578 ALTRARVPIVKLMDP-------GTDISCDICVNNLLAVENTKLLRDYSQIDVRLRQLAFIVKHWAKSRGVNETYHGTLSSYAYVLMCIHLLQRRRPAILPCL 672

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A396GN25_MEDTR (Putative polynucleotide adenylyltransferase n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GN25_MEDTR)

HSP 1 Score: 86.3 bits (212), Expect = 1.770e-17
Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 0

Query:    2 AVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPIL 101
            A+ RARVP+VK++ P       G  C  DI +NNL+A+ NTKLL  Y +IDPR  ++ +++K WAK+RGVN++  GTLSSY + +  +H+L   R  I+P L
Sbjct:  416 ALTRARVPIVKLMDP-----VTGISC--DICINNLLAVVNTKLLRDYANIDPRLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCVHFLQQQRPAILPCL 510

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A7J7CC33_TRIWF (Terminal uridylyltransferase 7 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CC33_TRIWF)

HSP 1 Score: 85.1 bits (209), Expect = 4.540e-17
Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 0

Query:    2 AVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPILLKV 104
            A+ RARVP+VK++ P       G  C  DI VNN++A+ NTKLL  Y  ID R  ++ Y+VK WAK+RGVN++  GTLSSY + +  +H+L   R  ++P L ++
Sbjct:  507 ALTRARVPIVKLMDPET-----GISC--DICVNNVLAVVNTKLLRDYASIDDRLRQLAYIVKHWAKSRGVNETYQGTLSSYAYVLMCIHFLQLRRPAVLPCLQEM 604

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A443NQY9_9MAGN (UTP:RNA uridylyltransferase 1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NQY9_9MAGN)

HSP 1 Score: 84.7 bits (208), Expect = 6.200e-17
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0

Query:    2 AVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPIL 101
            A+ RARVP+VK++ P         K S DI +NN++AL NTKLL  Y  ID R  ++ ++VK WAK+RGVN++  GTLSSY + +  +H+L   R  I+P L
Sbjct:  517 ALTRARVPIVKLMDPVT-------KISCDICINNVLALVNTKLLRDYAQIDVRLRQLAFIVKYWAKSRGVNETYHGTLSSYAYVLMCIHFLQSRRPAILPCL 611

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: UPI000E6F8825 (UTP:RNA uridylyltransferase 1-like n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F8825)

HSP 1 Score: 84.7 bits (208), Expect = 6.210e-17
Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 0

Query:    2 AVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRA--GIVPILLKV 104
            A+ RARVP+VK++ P       G  C  DI VNN++A+ NTKLL  Y  ID R  ++ +LVK WAK+RGVN++  GTLSSY + +  +H+L R    I+P L ++
Sbjct:  543 ALTRARVPIVKLMDPE-----SGISC--DICVNNVLAVVNTKLLRDYAQIDGRLRQLAFLVKHWAKSRGVNETYRGTLSSYAYVLMCIHFLQRRRPAILPCLQEM 640

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A6A1W1T8_9ROSI (Poly(A) RNA polymerase cid11 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1W1T8_9ROSI)

HSP 1 Score: 84.7 bits (208), Expect = 6.230e-17
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 0

Query:    1 MAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPILLKV 104
            MA+ RARVP+VK++ P       G  C  DI +NN++A+ NTKLL  Y  ID R  ++ ++VK WAK+RGVN++  GTLSSY + I  +H+L   R  I+P L ++
Sbjct:  575 MALMRARVPIVKLMDPAT-----GISC--DICINNVLAVINTKLLRDYARIDARLRQLAFIVKHWAKSRGVNETYRGTLSSYAYVIMCIHFLQQRRPAILPCLQEM 673

[Close]

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A836CN95_9STRA (TUTase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN95_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.280e-17
Identity = 42/99 (42.42%), Postives = 65/99 (65.66%), Query Frame = 0

Query:    3 VARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRAGIVPIL 101
            VARARVPV+K+V       P+    ++D+ +NN  A+HNT+L+  Y   D RC ++++++K WAK R +N+++ GTLSSY   +  +HYL   GI+P L
Sbjct:  676 VARARVPVIKVV------DPNCGGIAIDLVINNHHAVHNTRLMKAYAQFDERCRQLIFIIKHWAKCRRLNEASMGTLSSYSLSMMVVHYLQGVGILPNL 768

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G160_ECTSI	1.600e-43	72.82	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K7K2_9PHAE	1.670e-43	72.82	NTP_transf_2 domain-containing protein n=1 Tax=Ect...	[more]
A0A072TP93_MEDTR	9.460e-18	46.08	Nucleotidyltransferase family protein n=1 Tax=Medi...	[more]
UPI00125D171C	1.320e-17	47.06	UTP:RNA uridylyltransferase 1 n=2 Tax=Ipomoea TaxI...	[more]
A0A396GN25_MEDTR	1.770e-17	46.08	Putative polynucleotide adenylyltransferase n=1 Ta...	[more]
A0A7J7CC33_TRIWF	4.540e-17	44.76	Terminal uridylyltransferase 7 n=2 Tax=Tripterygiu...	[more]
A0A443NQY9_9MAGN	6.200e-17	46.08	UTP:RNA uridylyltransferase 1 n=1 Tax=Cinnamomum m...	[more]
UPI000E6F8825	6.210e-17	45.71	UTP:RNA uridylyltransferase 1-like n=2 Tax=Papaver...	[more]
A0A6A1W1T8_9ROSI	6.230e-17	45.28	Poly(A) RNA polymerase cid11 n=1 Tax=Morella rubra...	[more]
A0A836CN95_9STRA	6.280e-17	42.42	TUTase domain-containing protein n=1 Tax=Tribonema...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.460.10		coord: 2..51 e-value: 6.4E-29 score: 103.2
None	No IPR available	GENE3D	1.10.1410.10		coord: 52..101 e-value: 6.4E-29 score: 103.2
None	No IPR available	PANTHER	PTHR12271	POLY A POLYMERASE CID PAP -RELATED	coord: 3..100
None	No IPR available	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 3..49
None	No IPR available	SUPERFAMILY	81631	PAP/OAS1 substrate-binding domain	coord: 53..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8270	contig	H-paniculata_contig8270:7949..10341 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8270.16291.1	mRNA_H-paniculata_contig8270.16291.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8270 7937..10341 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8270.16291.1 ID=prot_H-paniculata_contig8270.16291.1|Name=mRNA_H-paniculata_contig8270.16291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
MAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTD
IDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRAGIVPI
LLKVC*