mRNA_H-paniculata_contig8270.16291.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: D7G160_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G160_ECTSI) HSP 1 Score: 163 bits (412), Expect = 2.110e-44 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 YLEVMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRAGIVPILLK 321
+ +VMAV R+RVPVVK PRRLWGP GR DISVNNLVA+HNT+L+ YTD+DPRCHR+LYLVK WAKARGV DS+ GTLSSYGHC+ LHYL R G+VP LLK
Sbjct: 552 FTDVMAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSKGTLSSYGHCLTVLHYLTRVGVVPSLLK 658
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A6H5K7K2_9PHAE (NTP_transf_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K2_9PHAE) HSP 1 Score: 163 bits (412), Expect = 2.240e-44 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1
Query: 1 YLEVMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRAGIVPILLK 321
+ +VMAV R+RVPVVK PRRLWGP GR DISVNNLVA+HNT+L+ YTD+DPRCHR+LYLVK WAKARGV DS+ GTLSSYGHC+ LHYL R G+VP LLK
Sbjct: 560 FTDVMAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSKGTLSSYGHCLTVLHYLTRVGVVPSLLK 666
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A072TP93_MEDTR (Nucleotidyltransferase family protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072TP93_MEDTR) HSP 1 Score: 87.4 bits (215), Expect = 4.120e-18 Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 10 VMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPIL 315
V A+ RARVP+VK++ P G C DI +NNL+A+ NTKLL Y +IDPR ++ +++K WAK+RGVN++ GTLSSY + + +H+L R I+P L
Sbjct: 133 VQALTRARVPIVKLMDP-----VTGISC--DICINNLLAVVNTKLLRDYANIDPRLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCVHFLQQQRPAILPCL 229
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: UPI00125D171C (UTP:RNA uridylyltransferase 1 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D171C) HSP 1 Score: 87.8 bits (216), Expect = 6.020e-18 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 10 VMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRA--GIVPIL 315
V A+ RARVP+VK++ P G S DI VNNL+A+ NTKLL Y+ ID R ++ ++VK WAK+RGVN++ GTLSSY + + +H L R I+P L
Sbjct: 576 VQALTRARVPIVKLMDP-------GTDISCDICVNNLLAVENTKLLRDYSQIDVRLRQLAFIVKHWAKSRGVNETYHGTLSSYAYVLMCIHLLQRRRPAILPCL 672
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A396GN25_MEDTR (Putative polynucleotide adenylyltransferase n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GN25_MEDTR) HSP 1 Score: 87.4 bits (215), Expect = 8.070e-18 Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 10 VMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPIL 315
V A+ RARVP+VK++ P G C DI +NNL+A+ NTKLL Y +IDPR ++ +++K WAK+RGVN++ GTLSSY + + +H+L R I+P L
Sbjct: 414 VQALTRARVPIVKLMDP-----VTGISC--DICINNLLAVVNTKLLRDYANIDPRLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCVHFLQQQRPAILPCL 510
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A4P9X8L9_9FUNG (Polynucleotide adenylyltransferase (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X8L9_9FUNG) HSP 1 Score: 85.5 bits (210), Expect = 1.170e-17 Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 1 YLEVMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSA-GGTLSSYGHCIGALHYL 288
+ +V +A+A+VP+ K P + DI++NNL+AL NT+L+ Y D+DPR L+LVK WAKARG+ D+A GT+SSYG C+ AL++L
Sbjct: 74 FTDVFTIAKAKVPICKFFDP-------ATALAGDININNLMALQNTRLIRRYADLDPRVRPFLFLVKAWAKARGLADAAKSGTISSYGWCMIALNFL 163
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A836CN95_9STRA (TUTase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN95_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.540e-17 Identity = 44/105 (41.90%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 1 YLEVMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLIRAGIVPIL 315
Y V VARARVPV+K+V P+ ++D+ +NN A+HNT+L+ Y D RC ++++++K WAK R +N+++ GTLSSY + +HYL GI+P L
Sbjct: 670 YTGVKPVARARVPVIKVV------DPNCGGIAIDLVINNHHAVHNTRLMKAYAQFDERCRQLIFIIKHWAKCRRLNEASMGTLSSYSLSMMVVHYLQGVGILPNL 768
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A1Q3C8T4_CEPFO (PAP_assoc domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3C8T4_CEPFO) HSP 1 Score: 86.3 bits (212), Expect = 2.060e-17 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 7 EVMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPILLKV 324
+V A+ARARVP+VK++ P G C DI +NN++A+ NTKLL Y ID R ++ Y+VK WAK+RGVN++ GTLSSY + I +++L R I+P L ++
Sbjct: 443 DVQALARARVPIVKLMDP-----VTGISC--DICINNVLAVVNTKLLRDYAQIDERLRQLAYIVKHWAKSRGVNETYRGTLSSYAYVIMCIYFLQQRRPAILPCLQEM 543
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A7J7CC33_TRIWF (Terminal uridylyltransferase 7 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CC33_TRIWF) HSP 1 Score: 86.3 bits (212), Expect = 2.070e-17 Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 10 VMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYLI--RAGIVPILLKV 324
V A+ RARVP+VK++ P G C DI VNN++A+ NTKLL Y ID R ++ Y+VK WAK+RGVN++ GTLSSY + + +H+L R ++P L ++
Sbjct: 505 VQALTRARVPIVKLMDPET-----GISC--DICVNNVLAVVNTKLLRDYASIDDRLRQLAYIVKHWAKSRGVNETYQGTLSSYAYVLMCIHFLQLRRPAVLPCLQEM 604
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Match: A0A5B7B3X9_DAVIN (Uncharacterized protein (Fragment) n=3 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7B3X9_DAVIN) HSP 1 Score: 85.9 bits (211), Expect = 2.640e-17 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 7 EVMAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDIDPRCHRVLYLVKGWAKARGVNDSAGGTLSSYGHCIGALHYL--IRAGIVPIL 315
+V A+ RARVP+VK++ P G C DI +NNL+A+ NTKLL Y ID R ++ ++VK WAK+RGVN++ GTLSSY + + +H+L R I+P L
Sbjct: 284 DVQALTRARVPIVKLMDP-----VTGISC--DICINNLLAVVNTKLLRDYAQIDVRLRQLAFIVKHWAKSRGVNETYQGTLSSYAYVLMCIHFLQQCRPAILPCL 381 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8270.16291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8270.16291.1 >prot_H-paniculata_contig8270.16291.1 ID=prot_H-paniculata_contig8270.16291.1|Name=mRNA_H-paniculata_contig8270.16291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp MAVARARVPVVKMVAPRRLWGPDGRKCSVDISVNNLVALHNTKLLCHYTDback to top mRNA from alignment at H-paniculata_contig8270:7937..10341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8270.16291.1 ID=mRNA_H-paniculata_contig8270.16291.1|Name=mRNA_H-paniculata_contig8270.16291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2405bp|location=Sequence derived from alignment at H-paniculata_contig8270:7937..10341+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8270:7937..10341+ >mRNA_H-paniculata_contig8270.16291.1 ID=mRNA_H-paniculata_contig8270.16291.1|Name=mRNA_H-paniculata_contig8270.16291.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=636bp|location=Sequence derived from alignment at H-paniculata_contig8270:7937..10341+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |