prot_H-paniculata_contig82636.16284.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig82636.16284.1
Unique Nameprot_H-paniculata_contig82636.16284.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5JLP8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP8_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.610e-15
Identity = 29/66 (43.94%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP G A+  + W++T +RPD++ AV
Sbjct:  563 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPMGEAIGSMMWVSTFSRPDVSFAV 628          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5KBH1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH1_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 6.390e-15
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:   64 ISQTAYIDSMVERFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 129          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 7.210e-15
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:  128 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 193          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-14
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:   64 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 129          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5K4T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T5_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.930e-14
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:  161 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 226          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 4.230e-14
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:  271 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 336          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5K1T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1T2_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 4.320e-14
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:  524 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 589          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 4.330e-14
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:  619 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 684          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 4.370e-14
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:  984 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 1049          
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 4.370e-14
Identity = 28/66 (42.42%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVECLFWLATMTRPDIANAV 66
            + QT ++D+++E+F++ S S +P T   DL P+R+DEEGG+WP   A+  + W++T +RPD++ AV
Sbjct:  921 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAV 986          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig82636.16284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLP8_9PHAE2.610e-1543.94Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KBH1_9PHAE6.390e-1542.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRS6_9PHAE7.210e-1542.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPT0_9PHAE1.400e-1442.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4T5_9PHAE3.930e-1442.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTL3_9PHAE4.230e-1442.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1T2_9PHAE4.320e-1442.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K164_9PHAE4.330e-1442.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE4.370e-1442.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRE9_9PHAE4.370e-1442.42Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig82636contigH-paniculata_contig82636:136..336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig82636.16284.1mRNA_H-paniculata_contig82636.16284.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig82636 136..360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig82636.16284.1 ID=prot_H-paniculata_contig82636.16284.1|Name=mRNA_H-paniculata_contig82636.16284.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MDQTVFVDNLMEQFEITSVSELPVTLLDDLRPRRDDEEGGDWPFGSAVEC
LFWLATMTRPDIANAV*
back to top