prot_H-paniculata_contig8175.16199.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8175.16199.1
Unique Nameprot_H-paniculata_contig8175.16199.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length248
Homology
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BLAST of mRNA_H-paniculata_contig8175.16199.1 vs. uniprot
Match: A0A6H5KGT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.440e-62
Identity = 133/228 (58.33%), Postives = 163/228 (71.49%), Query Frame = 0 
Query:    2 KKDIQKLRGLHAKRVSKLEALLREEGGRLAEARREIACCKANLAGDAGKFQRWTEEQRDQSKNVLEELARIQ--------LEAEAREREALAMGRLRKVMEEARLERAEGVEIRRQLREALGELESNRSVQARKARTDIQLQRTAEIAQQEVAMLEAERGRWHKERISMEAALEKLTRLVYGPPRINNNSQNSSXXXXXXXXXVTTAANTPTPRTKQAASPWKPSGFI 221
            ++DI KLRGLHA+RV +LEALL+EE   LA+ARRE+A CKA +AG+A +FQRWTE  R++S  +L+ELA IQ         EA+ARERE LAMGRLRKVMEEARLERAEG E++RQLREAL ELES+R+ QAR+AR ++QLQR AEIAQQEVAM+E+ER RW++ER SME A+E+LTRLVYG          S          V+ +  T  P       PWKP G I
Sbjct:  952 RRDIDKLRGLHARRVKRLEALLKEERDNLADARRELASCKATMAGEAAEFQRWTENHRNESTKLLKELAVIQKKVDRAVATEAQAREREGLAMGRLRKVMEEARLERAEGAEVKRQLREALAELESDRNAQARRARANLQLQRAAEIAQQEVAMVESERARWYEERRSMETAMERLTRLVYGTTAAAPGGNTSGDGNASAAAAVSKSTWTKAP----TGFPWKPPGCI 1175
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BLAST of mRNA_H-paniculata_contig8175.16199.1 vs. uniprot
Match: D8LEQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 2.120e-60
Identity = 118/182 (64.84%), Postives = 144/182 (79.12%), Query Frame = 0 
Query:    2 KKDIQKLRGLHAKRVSKLEALLREEGGRLAEARREIACCKANLAGDAGKFQRWTEEQRDQSKNVLEELARIQ--------LEAEAREREALAMGRLRKVMEEARLERAEGVEIRRQLREALGELESNRSVQARKARTDIQLQRTAEIAQQEVAMLEAERGRWHKERISMEAALEKLTRLVYG 175
            +KDI KLRGLHA+RV +LEALL+EEG  LA+ARREIA CKA +AGDA +FQRWTE  R++S  +L+ELA IQ         EA+ARERE LAMGRLRKVME        G E++RQLREAL ELES+R+ QAR+AR +++LQR AEIAQQEVAM+E+ER RW++ER SME A+E+LTRLVYG
Sbjct:   57 RKDIDKLRGLHARRVKRLEALLKEEGDNLADARREIASCKAAMAGDAAEFQRWTENHRNESTKLLKELAVIQKKVDRAVATEAQAREREGLAMGRLRKVME--------GAEVKRQLREALAELESDRNAQARRARANLKLQRAAEIAQQEVAMVESERARWYEERRSMETAMERLTRLVYG 230
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8175.16199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KGT0_9PHAE1.440e-6258.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEQ4_ECTSI2.120e-6064.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36
NoneNo IPR availableCOILSCoilCoilcoord: 131..158
NoneNo IPR availableCOILSCoilCoilcoord: 55..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8175contigH-paniculata_contig8175:1250..6330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8175.16199.1mRNA_H-paniculata_contig8175.16199.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8175 1250..6330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8175.16199.1 ID=prot_H-paniculata_contig8175.16199.1|Name=mRNA_H-paniculata_contig8175.16199.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
MKKDIQKLRGLHAKRVSKLEALLREEGGRLAEARREIACCKANLAGDAGK
FQRWTEEQRDQSKNVLEELARIQLEAEAREREALAMGRLRKVMEEARLER
AEGVEIRRQLREALGELESNRSVQARKARTDIQLQRTAEIAQQEVAMLEA
ERGRWHKERISMEAALEKLTRLVYGPPRINNNSQNSSNNANMTTNTVTTA
ANTPTPRTKQAASPWKPSGFIKASTFKRAQGTAAVGGGCKANVPGVGD
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