mRNA_H-paniculata_contig8095.16108.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.470e-58 Identity = 111/260 (42.69%), Postives = 153/260 (58.85%), Query Frame = 1
Query: 1 LQRRLKEMGATKAKRRITPPLSLTNRKNRVDFILDQAARHRITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSRLDSSRDFDGKIGIWRVCAIKQAQRISAR-------------RERGH----------QYEFDVIIDAG*YQEWYKGAFLPVLKEKMPWLEG-----EEDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLL 696
++R ++GA K RI P LS +++R+DFI D+ + +H+DE+WFYL R++++V++FSG++ G +V H+S++ K+M I +R D + DFDGKIGIWR+C I+ AQR S + RE H +YEFD IDA Y++WY LP +KEKMPWL ++D A+PHT K P LN G G V LVTQPAQSPDLNIN+LG FASLK RVW ++D L+
Sbjct: 105 VRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 141 bits (355), Expect = 8.190e-35 Identity = 93/288 (32.29%), Postives = 145/288 (50.35%), Query Frame = 1
Query: 49 ITPPLSLTNRKNRVDFILDQAARHRITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR----LDSSRDFDGKIGIWRVCAIKQAQRISARRERGHQYEFDV-IIDAG*YQEWYKGAFLPVLKEKMP--WLEG----EEDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKID 879
+ P L+ N+K RV+F L + F + TIHIDE WFYL + L SG+ ST + K +I KVMF+C V+R D + FDGKIGIW + AQR S R RG ++ ++A YQ+ LP ++EK P W +ED A PH + + E ++ G N+ + TQP SPD N+ +LGFFAS+++ +++R +D L+ ++ L ++ SL + +K N ++++H +K + +LP S+ D
Sbjct: 200 VKPFLTEKNKKARVEFALS-LIKPDGKFEDMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAKPHHLRSR-AAVREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVEEALVETSTIALNSIFLSLQCALEESIKVQGNNSYKLRHMGKEKLLKEDNLPVSITCD 484
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 130 bits (327), Expect = 3.930e-31 Identity = 95/297 (31.99%), Postives = 143/297 (48.15%), Query Frame = 1
Query: 49 ITPPLSLTNRKNRVDFILDQA----ARHRITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR----LDSSRDFDGKIGIWRVCAIKQAQRISARRERG-------HQYEFDVIIDAG*YQEWYKGAFLPVLKEKMP-WLEGE----EDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKID 879
I P L+ N+ RV + L Q + R+ ++S +HIDE WFY+ + DR L ++ + + K YI+KVMF+C VSR +D +DGK+GI+ + AQR S R RG H +V+ D +P +K K P W + +D ATPH P DG + + L+ QPA SPD NI +LGFF +++S + + TVD L+ + S + TL RV+ SL +IL GN ++V H + QR LP ++++
Sbjct: 131 IKPSLTNINKLARVRWSLSQLQPQITQGRVQYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDC------LINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDPDFQAAANSDGFK-IQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKDRLQRTVGLPNVLEVE 419
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: UPI00200958F7 (uncharacterized protein LOC125195984 n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI00200958F7) HSP 1 Score: 130 bits (326), Expect = 5.440e-31 Identity = 92/297 (30.98%), Postives = 144/297 (48.48%), Query Frame = 1
Query: 49 ITPPLSLTNRKNRVDFILDQA----ARHRITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR----LDSSRDFDGKIGIWRVCAIKQAQRISARRERG-------HQYEFDVIIDAG*YQEWYKGAFLPVLKEKMP-WLEGE----EDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKID 879
I P L+ N+ RV + L Q + R+ ++S +HIDE WFY+ + DR L ++ + + K +I+KVMF+C VSR +D +DGK+GI+ + AQR S R RG H +V+ D +P +K K P W + +D ATPH P + + G + L+ QP SPD NI +LGFF +++S + + TVD L+ + S + TL +V+ SL +IL+ GN ++V H + QR LPK ++++
Sbjct: 131 IKPALTNMNKLARVRWSLSQLQPQITQGRVQYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRS-CKSKRFITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKPLHSVTKEVMRDC------LINKIIPAIKAKWPIWASKDIYIQQDNATPHITAMDP-EFQVVANSDGFKIQLICQPPNSPDTNILDLGFFRAIQSLQYEKPCSTVDELVGNVCSSFAELSPQTLNKVFLSLQACLTEILQCRGGNGYKVPHINKDRLQRTVGLPKVLEVE 419
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: A0A8I6XRQ9_HORVV (HTH_Tnp_Tc3_2 domain-containing protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XRQ9_HORVV) HSP 1 Score: 132 bits (331), Expect = 6.420e-31 Identity = 95/313 (30.35%), Postives = 154/313 (49.20%), Query Frame = 1
Query: 7 RRLKEMGATKAKRRITPPLSLTNRKNRVDFILDQAARHRIT--------FRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR--LDSSRD--FDGKIGIWRVCAIKQAQRISARRERGHQYEFDVI--IDAG*YQEWYKGAFLPVLKEKMP----W--LEGEEDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKIDRE 885
RRLK + + P L+ N++ RV++ L R +T FR+ +HIDE WFY R + L S +E + +HK++I K+MF+ ++R D+ + FDGKIG+W QA++ S R RG +E +D QE+ LP +KEK P W + ++D A H + D P L E + GG ++ ++ QP SPD NI +LG+FAS+++ ++ T+ ++ ++ + L R+W S +I+K + V H + K +R G LP + +DRE
Sbjct: 356 RRLKMKEIRRITSELKPSLTAANKRARVEYALMHLERSSLTSQGGINPIFRADMDVVHIDEKWFYRMRKTQNMYL-SHREEAPHRECKHKNHIQKIMFLSAMARPRYDAQGNCVFDGKIGVWAYTEWVQAKKKSQNRLRG-AWELKPCDKVDREKSQEYLVKYVLPAIKEKWPESDRWNTIYVQQDNARTHIKPDDPLFLQEAAR-GGWDIRMIYQPPNSPDTNILDLGWFASIQAMFHKKMPKTLPEIVAKVNQSLAEYPHQKLNRIWLSHQACMREIIKHKGSMHYAVPHLKKKALERQGCLPVRLTVDRE 665
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: UPI002009DA99 (uncharacterized protein LOC125209340 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009DA99) HSP 1 Score: 127 bits (320), Expect = 7.530e-31 Identity = 91/297 (30.64%), Postives = 142/297 (47.81%), Query Frame = 1
Query: 49 ITPPLSLTNRKNRVDFILDQA----ARHRITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR----LDSSRDFDGKIGIWRVCAIKQAQRISARRERG-------HQYEFDVIIDAG*YQEWYKGAFLPVLKEKMP-WLEGE----EDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKID 879
I P L+ N+ RV + L Q + R+ ++S +HIDE WFY+ + DR L ++ + + K +I+KVMF+C VSR +D +DGK+GI+ + AQR S R RG H +V+ D +P +K K P W + +D ATPH P + + G + L+ QP SPD NI +LGF +++S + + TVD L+ + S + TL +V+ SL + L+ GN ++V H + QR LPK +++D
Sbjct: 28 IKPALTNMNKLARVRWSLSQLQPQITQARVQYQSMHNVVHIDEKWFYMTKASDRYYLLPDEDEPYRS-CKSKRFITKVMFMCAVSRPHFGMDGQATYDGKVGIFPFTEVLPAQRKSKNRPRGTMETKPLHSVTKEVMRDC------LINKIIPAIKAKWPIWASKDIYIQQDNATPHITAMDP-EFQAVANSDGFKIQLICQPPNSPDTNILDLGFLRAIQSLQYEKPCSTVDELVGNVCSSFAELSPQTLNKVFLSLQACLTEYLQCKGGNGYKVPHINKDRLQRTVGLPKVLEVD 316
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 130 bits (326), Expect = 1.150e-30 Identity = 94/295 (31.86%), Postives = 152/295 (51.53%), Query Frame = 1
Query: 49 ITPPLSLTNRKNRVDFILDQAARHRIT----FRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR--LDSSRD--FDGKIGIWRVCAIKQAQRISARRERGH-QYEFDVIIDAG*YQEWYKGAFLPVLKEKMP-------WLEGEEDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKIDRE 885
I P L+ ++ R+ F+L Q+ + F + IHIDE WF++++ R L S +E + K++I+KVMF+ ++R L + D +DGKIGI+ +AQR SA R G + + I +E LP ++ K P W++ +D A PH + + L E ++GG +N++ QPAQSPDLNI +LGFF +++S + TVD L++ ++ Y ++ + W L +ILK GN+++ H KK R+G LP +V+I E
Sbjct: 197 IKPKLTPKHKVARMKFVLSQSIPKSMNELPKFNHLYNMIHIDEKWFFMSKITQRFYLLS-EEEDPYRACQSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIRAKWPENGCKEIWIQ--QDNARPHIQPNDAEFL-EACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEE 487
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.910e-30 Identity = 92/286 (32.17%), Postives = 141/286 (49.30%), Query Frame = 1
Query: 55 PPLSLTNRKNRVDFILDQAARHRITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR----LDSSRDFDGKIGIWRVCAIKQAQRISARRERGHQYEFDVIIDAG*YQEWYKGAFLPVLKEKMPWLEG------EEDRATPHTRKDTPRK-LNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKID 879
P L+ N+ RV++IL+ + F F+ IHIDE WFYL R + L G+ ST + K++++KVMF+C +R ++ FDGKIGIW + A+R S R +G +D Y+ LP + EK P +ED A PH K T R+ + G N+ + TQP SPD+N+ +LGFF S++S +++R +D L+ ++ +D R TL V+ SL L N++++ H R G+LP S+ D
Sbjct: 235 PLLTAKNKLKRVEWILEHIDDNG-RFDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTS-KSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPH--KATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGTLPISIICD 516
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: UPI001C2541F4 (uncharacterized protein LOC121800620 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2541F4) HSP 1 Score: 128 bits (322), Expect = 2.000e-30 Identity = 90/291 (30.93%), Postives = 140/291 (48.11%), Query Frame = 1
Query: 49 ITPPLSLTNRKNRVDFILDQAARH----RITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR----LDSSRDFDGKIGIWRVCAIKQAQRISARRERGHQYEFDVI-IDAG*YQEWYKGAFLPVLKEKMP-WLEGE----EDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKID 879
I P L+ N+ R+ + L + H R+ F S +HIDE WFY+ + DR L E + K +I+KVMF+C VSR LD FDGK+GI+ + AQR S R +G + ++ ++ +P +K K P W E +D ATPH + + K G ++L+ QP SPD NI +LGFF ++++ + VD LLE + S Y+ TL +V+ SL +I+ N+++V H + +R LP ++ +D
Sbjct: 131 IKPALTDANKLARLKWCLSKLEPHINAGRVQFESMHNVVHIDEKWFYMTKTSDRYYLLPD-EVEPYRACKSKRFITKVMFMCAVSRPVFGLDGQTKFDGKLGIFPFTELVAAQRKSKNRAKGTLETKPISSVNKSVMRDCIINKIVPAIKAKWPEWASKEIYIQQDNATPHIN-GVDAEFEAIAKSDGFKIHLICQPPNSPDTNILDLGFFRAIQTLQHEKPCNNVDTLLENVCSSYEELSPQTLNKVFLSLQACLTEIMVFRGENNYKVPHINKARLERTVGLPNALDVD 419
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 127 bits (319), Expect = 5.390e-30 Identity = 95/294 (32.31%), Postives = 143/294 (48.64%), Query Frame = 1
Query: 49 ITPPLSLTNRKNRVDFILDQA----ARHRITFRSGFQTIHIDETWFYLNRDRDRVQLFSGKERVGSTKVEHKSYISKVMFICPVSR--LDSSRD--FDGKIGIWRVCAIKQAQRISARRERGHQYEFDVIIDAG*YQEWYKGAFL----PVLKEKMP-WLEGE----EDRATPHTRKDTPRKLNELGKDGGRNVNLVTQPAQSPDLNINNLGFFASLKSRVWRERYGTVDGLLERIKSMYDAFDRATLERVWQSLFQRYNQILKALRGNDFEVQHTETKKRQRVGSLPKSVKID 879
I P L+ N+ R+ + L Q + ++ F +HIDE WFY+ + DR L ++ + + K YI+KVMF+C VSR DS +DGK+GI+ AQR S R+RG E I +E +G + P +K K P W E +D ATPH P + + G ++L+ QP SPD NI +LGFF +++S ++ VD L+E + Y+ TL RV+ SL QIL+ N ++V H + +R G LP +++D
Sbjct: 132 IKPALTELNKLARLKWCLTQLQPSITQGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRG-TLETKPITTLN--KEVMRGCIIHKIIPAIKAKWPDWASKEIYIQQDNATPHITATDP-EFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLPNVLEVD 420 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8095.16108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8095.16108.1 >prot_H-paniculata_contig8095.16108.1 ID=prot_H-paniculata_contig8095.16108.1|Name=mRNA_H-paniculata_contig8095.16108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp MGATKAKRRITPPLSLTNRKNRVDFILDQAARHRITFRSGFQTIHIDETWback to top mRNA from alignment at H-paniculata_contig8095:3513..4412- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8095.16108.1 ID=mRNA_H-paniculata_contig8095.16108.1|Name=mRNA_H-paniculata_contig8095.16108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=900bp|location=Sequence derived from alignment at H-paniculata_contig8095:3513..4412- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8095:3513..4412- >mRNA_H-paniculata_contig8095.16108.1 ID=mRNA_H-paniculata_contig8095.16108.1|Name=mRNA_H-paniculata_contig8095.16108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig8095:3513..4412- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |