mRNA_H-paniculata_contig12562.1609.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A6H5J7G1_9PHAE (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G1_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 1.510e-142 Identity = 213/269 (79.18%), Postives = 229/269 (85.13%), Query Frame = 1 Query: 1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPT-KAKGSGMQLAVLVAVPLVASFVYLYGR 804 +VI DIT+RMGAGMAEFVSKDLGQGT ST EYDKYCHYVAGLVGDGLTRLF ATG+EG E+L AP L+NSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWK+HA TGQLGEFALPQFR+ N LACLNELVTDAL L+PDCLAYMR IK EVFRFCAIPQVMAIATLAE+YNNPDVFRGVVKIRKGLACRMILES NL+GI WFNKLA GIA RVPA DP ASRT Q C A+D+T PT KA + VL +VP++ S YLY R Sbjct: 425 EVISDITKRMGAGMAEFVSKDLGQGTTSTVEYDKYCHYVAGLVGDGLTRLFVATGIEGQELLLAPELANSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKKHAKTGQLGEFALPQFRE--NALACLNELVTDALALVPDCLAYMRQIKDPEVFRFCAIPQVMAIATLAEIYNNPDVFRGVVKIRKGLACRMILESGNLEGIFCWFNKLAEGIAARVPALDPCASRTTQVCKIAVDMTTPTGKALRTSRTKVVLYSVPVLLSAAYLYRR 691
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S2UWS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS2_9STRA) HSP 1 Score: 330 bits (845), Expect = 1.870e-104 Identity = 162/268 (60.45%), Postives = 205/268 (76.49%), Query Frame = 1 Query: 1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAK-----GSGMQLAVLVAVPLVASFV 789 +VI DITRRMGAGMAEFV KDLGQGT +T EY++YCH+VAG++G+GL+RLF+ATG E + L+NSMGLFLQKTNIIRDYLEDYVDGRAFWPQ+VWK+++ TGQLGEFALP FRQ N L CLN LV DAL+ + DCL Y+ ++++ EVFRFCAIPQ+MAIAT+AEVYNN VF GVVKIRKGLA ++IL+S +++G+H WF A I +V D +A +TV++C + MD+T KAK G+ M L L+ +P + V Sbjct: 493 EVIADITRRMGAGMAEFVGKDLGQGTTTTVEYNRYCHFVAGMIGEGLSRLFSATGKESESLALQVELANSMGLFLQKTNIIRDYLEDYVDGRAFWPQEVWKKYSKTGQLGEFALPHFRQ--NALNCLNHLVLDALDHVEDCLKYLSLLRNPEVFRFCAIPQIMAIATMAEVYNNEKVFTGVVKIRKGLAAQLILDSSSIEGVHKWFYAFAQVIKAKVSEQDANAKKTVESCERIMDLTAD-KAKTHGVTGNKMMLVGLLVLPALGYVV 757
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S1TT08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TT08_9STRA) HSP 1 Score: 320 bits (821), Expect = 3.790e-101 Identity = 162/281 (57.65%), Postives = 208/281 (74.02%), Query Frame = 1 Query: 1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGP-EILDAPH-------LSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLA----VLVAVPLVASFVYLYGRR 807 +VI DIT+RMG GMAEFV+KDLGQGT + AEYD+YCH+VAGLVG+GL+RLF TG++ E + P L N MGLFLQKTNIIRDYLED+VDGRAFWPQ+VWK +A+ LGEFALP+ + S+ LACLN LVTDALELIP+CL Y+ ++++ EVFRFCAIPQVMAIATL + YNNPDVF GVVKIRKG +C++IL+S +L+G+H WF +A+ + RR+P SDPS RT C +++T ++ + LA V+V + V YL+ R+ Sbjct: 436 EVIADITKRMGEGMAEFVTKDLGQGTTTVAEYDRYCHFVAGLVGEGLSRLFCVTGLKAARETYEDPAIESNLLALCNPMGLFLQKTNIIRDYLEDFVDGRAFWPQEVWKLYASES-LGEFALPENQ--SSALACLNHLVTDALELIPECLDYLALLRNPEVFRFCAIPQVMAIATLTKCYNNPDVFTGVVKIRKGQSCQLILDSGSLEGVHFWFYTMASDVLRRLPGSDPSFQRTEVACRTVLELTSERYSRKKFLNLAKTLNVIVPIGAVICAAYLFQRK 713
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: B8BXY6_THAPS (Squalene synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXY6_THAPS) HSP 1 Score: 300 bits (768), Expect = 6.990e-97 Identity = 144/238 (60.50%), Postives = 182/238 (76.47%), Query Frame = 1 Query: 1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSN-GLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPAS------DPSASRTVQTC 693 +VI DIT+RM GMAEFV KDLGQGTV +Y++YCH+VAGLVG+GL+RLF+ +G+E P + HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VWK+++++G LG FA P + +N GL CLNELVTDALEL+PDCL Y+ ++ AEVFRFCAIPQVMAIATL + +NN DVF GVVKIRKG++C +I + ++ G+H FNK A + R+ + DPS RT++ C Sbjct: 203 RVISDITQRMATGMAEFVDKDLGQGTVDVQQYNRYCHFVAGLVGEGLSRLFSVSGLEQPSLATELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQSVWKKYSSSGDLGYFANPTTEEATNAGLYCLNELVTDALELVPDCLTYLSKLRCAEVFRFCAIPQVMAIATLEKCFNNGDVFTGVVKIRKGMSCMLINNTTDVLGVHGIFNKFATKVIRKAETARKSGFEDPSYDRTIKAC 440
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A8J6C1C1_DIALT (Squalene synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1C1_DIALT) HSP 1 Score: 296 bits (758), Expect = 2.690e-95 Identity = 156/278 (56.12%), Postives = 195/278 (70.14%), Query Frame = 1 Query: 4 VIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEG---------PEILDAPH----LSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHAT-TGQLGEFALPQ--FRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLVASFV 789 VI D+TRRM GMAEFV KDLG+GT + EY++YC+YVAGLVG+GLTRLF A G E P ++ A H L SMGLFLQKTNIIRDYLEDYVDGRAFWP++VW +AT T LGEFA P+ + + LA LN LV DALEL+PDCL+YM +I H ++FRFCAIPQVMAIATL +VYNN DVF GVVK+RKGLA +MI+ + GI AWF++ A I RR P SDPSA RT C + + +T A S ++ A+++ + ++ + V Sbjct: 167 VIADVTRRMADGMAEFVGKDLGEGTQTIDEYNRYCYYVAGLVGEGLTRLFHACGYESAQFEQRALDPALVTAQHKQGGLDKSMGLFLQKTNIIRDYLEDYVDGRAFWPKEVWSLYATDTKSLGEFAYPKPGSQVEARALALLNHLVCDALELVPDCLSYMTLITHPDIFRFCAIPQVMAIATLDKVYNNKDVFSGVVKVRKGLAVKMIMTCGTMGGIKAWFHEFAVEIKRRTPPSDPSAVRTYAACDRILTLT--ADAAPSPLRAAMILVLAIIVAAV 442
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S3UWZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWZ9_HETAK) HSP 1 Score: 310 bits (794), Expect = 3.920e-95 Identity = 156/267 (58.43%), Postives = 197/267 (73.78%), Query Frame = 1 Query: 4 VIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHA-TTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDIT--KPTKAKGSGMQLAVLVAVPLVASFVYL 795 VI DI RMG GM EF + DLGQGT + +YD YCHYVAGLVG+GL+RLF+A+G E PE+ L+NSMGLFLQKTNIIRD+LEDYVDGRA+WP++VW +HA TG LGEFALP++R N L CLNELVTDAL DCLAYM +++ EVFRFCAIPQVMAIATL +VYNNPDVF GV KIRKGLA +MI+++ + G+H +F+ A I RVP DPSA++T + C + +T K ++ + GM +A L+ LV + ++ Sbjct: 715 VIADICERMGRGMGEFAAADLGQGTATLRDYDLYCHYVAGLVGEGLSRLFSASGKEAPEVAAQTTLANSMGLFLQKTNIIRDFLEDYVDGRAWWPREVWGKHAKATGLLGEFALPEYR--GNALGCLNELVTDALGHAADCLAYMEKLRNPEVFRFCAIPQVMAIATLDKVYNNPDVFTGVAKIRKGLAVKMIVDTTSKSGLHHYFHSFAQRIKSRVPVEDPSATKTHEVCDLIITLTEKKASEFRRPGMMVAGLLMACLVIALSFI 979
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S1CZR9_CYCTE (Squalene synthase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZR9_CYCTE) HSP 1 Score: 293 bits (750), Expect = 1.710e-94 Identity = 145/270 (53.70%), Postives = 191/270 (70.74%), Query Frame = 1 Query: 1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQ------FRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLVASFVY 792 ++I DI +RM GMAEFV KD+GQGTV +Y++YCH+VAGLVG+GL+RLF+A+G+E P HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VWK+++ +G LG F+ Q R+V+ + CLNELVTDALEL PDCLAYM ++ E+FRFCAIPQVMAIATL ++Y N DVF GVVKIRKGL+C++IL + +L +H F A I ++V DP+ RTV+ C +++T + AV+ + ++ V+ Sbjct: 91 RIIADICQRMATGMAEFVDKDMGQGTVDIPQYNRYCHFVAGLVGEGLSRLFSASGLEKPSFASELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQTVWKKYSKSGDLGYFSQLQEGGDGSIREVA--IHCLNELVTDALELAPDCLAYMSKLQCYEIFRFCAIPQVMAIATLDKLYGNADVFTGVVKIRKGLSCKLILRTNSLQQVHQIFYDHATSILKKVEQDDPNRERTVKACQAVLELTAANATSSTMSSWAVVWGLLILMGAVH 358
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A4D9D8W4_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W4_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.960e-94 Identity = 155/254 (61.02%), Postives = 193/254 (75.98%), Query Frame = 1 Query: 4 VIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDA-PHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTG----QLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPA----SDPSASRTVQTCHKAMDITKPTKAKGS 738 VI DITRRMGAGMA+FV KDLGQGTVS EYD YCHYVAGLVG+GLTR+FA +G+E P++ + L+NSMGLFLQKTNIIRDYLED+VDGRAFWPQ+VWKRHA + LG FA + R+ LACL+ELVT+ALE +PDCLAYM + +VFRFCAIPQVMAIATL +VY+NPDVF GVVKIRKGLAC++ILE+ +++ ++A F+ A IARR A D +++T+Q C + + K +A + Sbjct: 443 VIKDITRRMGAGMADFVDKDLGQGTVSLQEYDLYCHYVAGLVGEGLTRMFAESGLEAPDLATSRQELANSMGLFLQKTNIIRDYLEDFVDGRAFWPQEVWKRHAPSAVPAQSLGAFAEAEHRE--RALACLDELVTNALEHVPDCLAYMSRLHTPQVFRFCAIPQVMAIATLEKVYHNPDVFTGVVKIRKGLACKLILEANSMEDLYACFSSFAGRIARRAAALEKRGDSVSAQTLQVCEEIRVLCKEGEASST 694
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A4P2PS18_9STRA (Squalene synthase n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A4P2PS18_9STRA) HSP 1 Score: 296 bits (757), Expect = 7.090e-94 Identity = 147/266 (55.26%), Postives = 186/266 (69.92%), Query Frame = 1 Query: 1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFA-LPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPAS------DPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLV 777 ++I DIT RM GMAEFV+KDLGQGT +Y++YCH+VAGLVG+GLTRLF A+G+E PEI+D LS+ MGLFLQK NIIRDYLEDYVDGRAFWPQ +WK+++ G LG FA + L CLNELVTDALEL PDCLAY+ ++ VFRFCAIPQVMAIATL + YNN DVF GVVKIRKGL+C+++L++ +L+G+H F A IA+R + DPS RT+ C+K ++T + + +P V Sbjct: 223 EIIADITFRMATGMAEFVNKDLGQGTTDVKQYNRYCHFVAGLVGEGLTRLFVASGLEDPEIVDKLFLSDQMGLFLQKNNIIRDYLEDYVDGRAFWPQSIWKKYSKNGDLGYFANQSEEENRKQSLKCLNELVTDALELAPDCLAYLSKLRCDGVFRFCAIPQVMAIATLDKCYNNLDVFTGVVKIRKGLSCKLLLQTNDLNGVHNTFYVFAKSIAQRAQQAKEDGIDDPSYERTMNICNKICELTDNARKTSKNRDILYHYIIPTV 488
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S2ECB1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECB1_9STRA) HSP 1 Score: 301 bits (770), Expect = 1.210e-93 Identity = 148/258 (57.36%), Postives = 190/258 (73.64%), Query Frame = 1 Query: 1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFA-----LPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDIT-----KPTKAKGSGM 744 +VI DI+ RM GMAEFV KDLGQGT+ +Y++YCH+VAGLVG+GL+RLFA +G+E P + HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VW +++T+G LG FA L Q + L CLNELVTDAL L+PDCLAY+ ++ EVFRFCAIPQVMAIATL + +NNP+VF GVVKIRKGL+C++IL + + G+HA F A IA ++ +DP+A T++ C ++IT + TK K +G+ Sbjct: 424 RVIADISHRMATGMAEFVGKDLGQGTLDITQYNRYCHFVAGLVGEGLSRLFAVSGLESPSMAKELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQSVWNKYSTSGDLGYFANQSDPLAQ----TKSLHCLNELVTDALSLVPDCLAYLAKLRCTEVFRFCAIPQVMAIATLDKCFNNPNVFTGVVKIRKGLSCQLILHTNDAQGVHAAFRHFANSIASKINPNDPNADATLKACDAILEITAEQHSRATKQKRTGL 677 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12562.1609.1 >prot_H-paniculata_contig12562.1609.1 ID=prot_H-paniculata_contig12562.1609.1|Name=mRNA_H-paniculata_contig12562.1609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPback to top mRNA from alignment at H-paniculata_contig12562:135..2543+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12562.1609.1 ID=mRNA_H-paniculata_contig12562.1609.1|Name=mRNA_H-paniculata_contig12562.1609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2409bp|location=Sequence derived from alignment at H-paniculata_contig12562:135..2543+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12562:135..2543+ >mRNA_H-paniculata_contig12562.1609.1 ID=mRNA_H-paniculata_contig12562.1609.1|Name=mRNA_H-paniculata_contig12562.1609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig12562:135..2543+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |