prot_H-paniculata_contig12562.1609.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12562.1609.1
Unique Nameprot_H-paniculata_contig12562.1609.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length261
Homology
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A6H5J7G1_9PHAE (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G1_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 6.980e-138
Identity = 207/260 (79.62%), Postives = 221/260 (85.00%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPT-KAKGSGMQLAVLVAVPLVASFVYLYGR 259
            MGAGMAEFVSKDLGQGT ST EYDKYCHYVAGLVGDGLTRLF ATG+EG E+L AP L+NSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWK+HA TGQLGEFALPQFR+  N LACLNELVTDAL L+PDCLAYMR IK  EVFRFCAIPQVMAIATLAE+YNNPDVFRGVVKIRKGLACRMILES NL+GI  WFNKLA GIA RVPA DP ASRT Q C  A+D+T PT KA  +     VL +VP++ S  YLY R
Sbjct:  434 MGAGMAEFVSKDLGQGTTSTVEYDKYCHYVAGLVGDGLTRLFVATGIEGQELLLAPELANSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKKHAKTGQLGEFALPQFRE--NALACLNELVTDALALVPDCLAYMRQIKDPEVFRFCAIPQVMAIATLAEIYNNPDVFRGVVKIRKGLACRMILESGNLEGIFCWFNKLAEGIAARVPALDPCASRTTQVCKIAVDMTTPTGKALRTSRTKVVLYSVPVLLSAAYLYRR 691          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S2UWS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS2_9STRA)

HSP 1 Score: 315 bits (808), Expect = 4.010e-99
Identity = 155/259 (59.85%), Postives = 197/259 (76.06%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAK-----GSGMQLAVLVAVPLVASFV 254
            MGAGMAEFV KDLGQGT +T EY++YCH+VAG++G+GL+RLF+ATG E   +     L+NSMGLFLQKTNIIRDYLEDYVDGRAFWPQ+VWK+++ TGQLGEFALP FRQ  N L CLN LV DAL+ + DCL Y+ ++++ EVFRFCAIPQ+MAIAT+AEVYNN  VF GVVKIRKGLA ++IL+S +++G+H WF   A  I  +V   D +A +TV++C + MD+T   KAK     G+ M L  L+ +P +   V
Sbjct:  502 MGAGMAEFVGKDLGQGTTTTVEYNRYCHFVAGMIGEGLSRLFSATGKESESLALQVELANSMGLFLQKTNIIRDYLEDYVDGRAFWPQEVWKKYSKTGQLGEFALPHFRQ--NALNCLNHLVLDALDHVEDCLKYLSLLRNPEVFRFCAIPQIMAIATMAEVYNNEKVFTGVVKIRKGLAAQLILDSSSIEGVHKWFYAFAQVIKAKVSEQDANAKKTVESCERIMDLTAD-KAKTHGVTGNKMMLVGLLVLPALGYVV 757          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S1TT08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TT08_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.930e-96
Identity = 156/272 (57.35%), Postives = 200/272 (73.53%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGP-EILDAPH-------LSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLA----VLVAVPLVASFVYLYGRR 260
            MG GMAEFV+KDLGQGT + AEYD+YCH+VAGLVG+GL+RLF  TG++   E  + P        L N MGLFLQKTNIIRDYLED+VDGRAFWPQ+VWK +A+   LGEFALP+ +  S+ LACLN LVTDALELIP+CL Y+ ++++ EVFRFCAIPQVMAIATL + YNNPDVF GVVKIRKG +C++IL+S +L+G+H WF  +A+ + RR+P SDPS  RT   C   +++T    ++   + LA    V+V +  V    YL+ R+
Sbjct:  445 MGEGMAEFVTKDLGQGTTTVAEYDRYCHFVAGLVGEGLSRLFCVTGLKAARETYEDPAIESNLLALCNPMGLFLQKTNIIRDYLEDFVDGRAFWPQEVWKLYASES-LGEFALPENQ--SSALACLNHLVTDALELIPECLDYLALLRNPEVFRFCAIPQVMAIATLTKCYNNPDVFTGVVKIRKGQSCQLILDSGSLEGVHFWFYTMASDVLRRLPGSDPSFQRTEVACRTVLELTSERYSRKKFLNLAKTLNVIVPIGAVICAAYLFQRK 713          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: B8BXY6_THAPS (Squalene synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXY6_THAPS)

HSP 1 Score: 288 bits (738), Expect = 1.660e-92
Identity = 138/229 (60.26%), Postives = 174/229 (75.98%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSN-GLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPAS------DPSASRTVQTC 222
            M  GMAEFV KDLGQGTV   +Y++YCH+VAGLVG+GL+RLF+ +G+E P +    HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VWK+++++G LG FA P   + +N GL CLNELVTDALEL+PDCL Y+  ++ AEVFRFCAIPQVMAIATL + +NN DVF GVVKIRKG++C +I  + ++ G+H  FNK A  + R+   +      DPS  RT++ C
Sbjct:  212 MATGMAEFVDKDLGQGTVDVQQYNRYCHFVAGLVGEGLSRLFSVSGLEQPSLATELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQSVWKKYSSSGDLGYFANPTTEEATNAGLYCLNELVTDALELVPDCLTYLSKLRCAEVFRFCAIPQVMAIATLEKCFNNGDVFTGVVKIRKGMSCMLINNTTDVLGVHGIFNKFATKVIRKAETARKSGFEDPSYDRTIKAC 440          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S3UWZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWZ9_HETAK)

HSP 1 Score: 301 bits (770), Expect = 8.190e-92
Identity = 151/259 (58.30%), Postives = 192/259 (74.13%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHA-TTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDIT--KPTKAKGSGMQLAVLVAVPLVASFVYL 256
            MG GM EF + DLGQGT +  +YD YCHYVAGLVG+GL+RLF+A+G E PE+     L+NSMGLFLQKTNIIRD+LEDYVDGRA+WP++VW +HA  TG LGEFALP++R   N L CLNELVTDAL    DCLAYM  +++ EVFRFCAIPQVMAIATL +VYNNPDVF GV KIRKGLA +MI+++ +  G+H +F+  A  I  RVP  DPSA++T + C   + +T  K ++ +  GM +A L+   LV +  ++
Sbjct:  723 MGRGMGEFAAADLGQGTATLRDYDLYCHYVAGLVGEGLSRLFSASGKEAPEVAAQTTLANSMGLFLQKTNIIRDFLEDYVDGRAWWPREVWGKHAKATGLLGEFALPEYR--GNALGCLNELVTDALGHAADCLAYMEKLRNPEVFRFCAIPQVMAIATLDKVYNNPDVFTGVAKIRKGLAVKMIVDTTSKSGLHHYFHSFAQRIKSRVPVEDPSATKTHEVCDLIITLTEKKASEFRRPGMMVAGLLMACLVIALSFI 979          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S1CZR9_CYCTE (Squalene synthase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZR9_CYCTE)

HSP 1 Score: 283 bits (725), Expect = 7.250e-91
Identity = 141/261 (54.02%), Postives = 184/261 (70.50%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQ------FRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLVASFVY 255
            M  GMAEFV KD+GQGTV   +Y++YCH+VAGLVG+GL+RLF+A+G+E P      HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VWK+++ +G LG F+  Q       R+V+  + CLNELVTDALEL PDCLAYM  ++  E+FRFCAIPQVMAIATL ++Y N DVF GVVKIRKGL+C++IL + +L  +H  F   A  I ++V   DP+  RTV+ C   +++T       +    AV+  + ++   V+
Sbjct:  100 MATGMAEFVDKDMGQGTVDIPQYNRYCHFVAGLVGEGLSRLFSASGLEKPSFASELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQTVWKKYSKSGDLGYFSQLQEGGDGSIREVA--IHCLNELVTDALELAPDCLAYMSKLQCYEIFRFCAIPQVMAIATLDKLYGNADVFTGVVKIRKGLSCKLILRTNSLQQVHQIFYDHATSILKKVEQDDPNRERTVKACQAVLELTAANATSSTMSSWAVVWGLLILMGAVH 358          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A8J6C1C1_DIALT (Squalene synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1C1_DIALT)

HSP 1 Score: 283 bits (724), Expect = 2.550e-90
Identity = 150/270 (55.56%), Postives = 188/270 (69.63%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEG---------PEILDAPH----LSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHAT-TGQLGEFALPQ--FRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLVASFV 254
            M  GMAEFV KDLG+GT +  EY++YC+YVAGLVG+GLTRLF A G E          P ++ A H    L  SMGLFLQKTNIIRDYLEDYVDGRAFWP++VW  +AT T  LGEFA P+   +  +  LA LN LV DALEL+PDCL+YM +I H ++FRFCAIPQVMAIATL +VYNN DVF GVVK+RKGLA +MI+    + GI AWF++ A  I RR P SDPSA RT   C + + +T    A  S ++ A+++ + ++ + V
Sbjct:  175 MADGMAEFVGKDLGEGTQTIDEYNRYCYYVAGLVGEGLTRLFHACGYESAQFEQRALDPALVTAQHKQGGLDKSMGLFLQKTNIIRDYLEDYVDGRAFWPKEVWSLYATDTKSLGEFAYPKPGSQVEARALALLNHLVCDALELVPDCLSYMTLITHPDIFRFCAIPQVMAIATLDKVYNNKDVFSGVVKVRKGLAVKMIMTCGTMGGIKAWFHEFAVEIKRRTPPSDPSAVRTYAACDRILTLT--ADAAPSPLRAAMILVLAIIVAAV 442          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A4P2PS18_9STRA (Squalene synthase n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A4P2PS18_9STRA)

HSP 1 Score: 285 bits (729), Expect = 7.920e-90
Identity = 142/257 (55.25%), Postives = 179/257 (69.65%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFA-LPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPAS------DPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLV 250
            M  GMAEFV+KDLGQGT    +Y++YCH+VAGLVG+GLTRLF A+G+E PEI+D   LS+ MGLFLQK NIIRDYLEDYVDGRAFWPQ +WK+++  G LG FA   +       L CLNELVTDALEL PDCLAY+  ++   VFRFCAIPQVMAIATL + YNN DVF GVVKIRKGL+C+++L++ +L+G+H  F   A  IA+R   +      DPS  RT+  C+K  ++T   +       +     +P V
Sbjct:  232 MATGMAEFVNKDLGQGTTDVKQYNRYCHFVAGLVGEGLTRLFVASGLEDPEIVDKLFLSDQMGLFLQKNNIIRDYLEDYVDGRAFWPQSIWKKYSKNGDLGYFANQSEEENRKQSLKCLNELVTDALELAPDCLAYLSKLRCDGVFRFCAIPQVMAIATLDKCYNNLDVFTGVVKIRKGLSCKLLLQTNDLNGVHNTFYVFAKSIAQRAQQAKEDGIDDPSYERTMNICNKICELTDNARKTSKNRDILYHYIIPTV 488          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S2ECB1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECB1_9STRA)

HSP 1 Score: 290 bits (743), Expect = 8.350e-90
Identity = 143/249 (57.43%), Postives = 183/249 (73.49%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFA-----LPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDIT-----KPTKAKGSGM 239
            M  GMAEFV KDLGQGT+   +Y++YCH+VAGLVG+GL+RLFA +G+E P +    HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VW +++T+G LG FA     L Q    +  L CLNELVTDAL L+PDCLAY+  ++  EVFRFCAIPQVMAIATL + +NNP+VF GVVKIRKGL+C++IL + +  G+HA F   A  IA ++  +DP+A  T++ C   ++IT     + TK K +G+
Sbjct:  433 MATGMAEFVGKDLGQGTLDITQYNRYCHFVAGLVGEGLSRLFAVSGLESPSMAKELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQSVWNKYSTSGDLGYFANQSDPLAQ----TKSLHCLNELVTDALSLVPDCLAYLAKLRCTEVFRFCAIPQVMAIATLDKCFNNPNVFTGVVKIRKGLSCQLILHTNDAQGVHAAFRHFANSIASKINPNDPNADATLKACDAILEITAEQHSRATKQKRTGL 677          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A4D9D8W4_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W4_9STRA)

HSP 1 Score: 290 bits (742), Expect = 2.050e-89
Identity = 148/246 (60.16%), Postives = 186/246 (75.61%), Query Frame = 0
Query:    1 MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDA-PHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTG----QLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPA----SDPSASRTVQTCHKAMDITKPTKAKGS 237
            MGAGMA+FV KDLGQGTVS  EYD YCHYVAGLVG+GLTR+FA +G+E P++  +   L+NSMGLFLQKTNIIRDYLED+VDGRAFWPQ+VWKRHA +      LG FA  + R+    LACL+ELVT+ALE +PDCLAYM  +   +VFRFCAIPQVMAIATL +VY+NPDVF GVVKIRKGLAC++ILE+ +++ ++A F+  A  IARR  A     D  +++T+Q C +   + K  +A  +
Sbjct:  451 MGAGMADFVDKDLGQGTVSLQEYDLYCHYVAGLVGEGLTRMFAESGLEAPDLATSRQELANSMGLFLQKTNIIRDYLEDFVDGRAFWPQEVWKRHAPSAVPAQSLGAFAEAEHRE--RALACLDELVTNALEHVPDCLAYMSRLHTPQVFRFCAIPQVMAIATLEKVYHNPDVFTGVVKIRKGLACKLILEANSMEDLYACFSSFAGRIARRAAALEKRGDSVSAQTLQVCEEIRVLCKEGEASST 694          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7G1_9PHAE6.980e-13879.62Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A7S2UWS2_9STRA4.010e-9959.85Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TT08_9STRA2.930e-9657.35Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B8BXY6_THAPS1.660e-9260.26Squalene synthase (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S3UWZ9_HETAK8.190e-9258.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1CZR9_CYCTE7.250e-9154.02Squalene synthase n=1 Tax=Cyclophora tenuis TaxID=... [more]
A0A8J6C1C1_DIALT2.550e-9055.56Squalene synthase n=1 Tax=Diacronema lutheri TaxID... [more]
A0A4P2PS18_9STRA7.920e-9055.25Squalene synthase n=1 Tax=Rhizosolenia setigera Ta... [more]
A0A7S2ECB1_9STRA8.350e-9057.43Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A4D9D8W4_9STRA2.050e-8960.16Nudix hydrolase domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 1..228
e-value: 4.0E-79
score: 268.0
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 2..224
IPR006449Squalene synthase-likeTIGRFAMTIGR01559TIGR01559coord: 1..225
e-value: 2.5E-87
score: 291.2
NoneNo IPR availablePFAMPF00494SQS_PSYcoord: 3..177
e-value: 4.3E-26
score: 92.0
NoneNo IPR availablePANTHERPTHR11626FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASEcoord: 1..234
NoneNo IPR availablePANTHERPTHR11626:SF2SQUALENE SYNTHASEcoord: 1..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 259..260
NoneNo IPR availableTMHMMTMhelixcoord: 236..258
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01044SQUALEN_PHYTOEN_SYN_1coord: 26..41
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01045SQUALEN_PHYTOEN_SYN_2coord: 62..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12562contigH-paniculata_contig12562:162..2543 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12562.1609.1mRNA_H-paniculata_contig12562.1609.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12562 135..2543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12562.1609.1 ID=prot_H-paniculata_contig12562.1609.1|Name=mRNA_H-paniculata_contig12562.1609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGP
EILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQL
GEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAI
PQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKL
AAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLV
ASFVYLYGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf
IPR006449Squal_synth-like
IPR019845Squalene/phytoene_synthase_CS