mRNA_H-paniculata_contig12562.1609.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12562.1609.1
Unique NamemRNA_H-paniculata_contig12562.1609.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A6H5J7G1_9PHAE (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7G1_9PHAE)

HSP 1 Score: 425 bits (1092), Expect = 1.510e-142
Identity = 213/269 (79.18%), Postives = 229/269 (85.13%), Query Frame = 1
Query:    1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPT-KAKGSGMQLAVLVAVPLVASFVYLYGR 804
            +VI DIT+RMGAGMAEFVSKDLGQGT ST EYDKYCHYVAGLVGDGLTRLF ATG+EG E+L AP L+NSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWK+HA TGQLGEFALPQFR+  N LACLNELVTDAL L+PDCLAYMR IK  EVFRFCAIPQVMAIATLAE+YNNPDVFRGVVKIRKGLACRMILES NL+GI  WFNKLA GIA RVPA DP ASRT Q C  A+D+T PT KA  +     VL +VP++ S  YLY R
Sbjct:  425 EVISDITKRMGAGMAEFVSKDLGQGTTSTVEYDKYCHYVAGLVGDGLTRLFVATGIEGQELLLAPELANSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKKHAKTGQLGEFALPQFRE--NALACLNELVTDALALVPDCLAYMRQIKDPEVFRFCAIPQVMAIATLAEIYNNPDVFRGVVKIRKGLACRMILESGNLEGIFCWFNKLAEGIAARVPALDPCASRTTQVCKIAVDMTTPTGKALRTSRTKVVLYSVPVLLSAAYLYRR 691          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S2UWS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWS2_9STRA)

HSP 1 Score: 330 bits (845), Expect = 1.870e-104
Identity = 162/268 (60.45%), Postives = 205/268 (76.49%), Query Frame = 1
Query:    1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAK-----GSGMQLAVLVAVPLVASFV 789
            +VI DITRRMGAGMAEFV KDLGQGT +T EY++YCH+VAG++G+GL+RLF+ATG E   +     L+NSMGLFLQKTNIIRDYLEDYVDGRAFWPQ+VWK+++ TGQLGEFALP FRQ  N L CLN LV DAL+ + DCL Y+ ++++ EVFRFCAIPQ+MAIAT+AEVYNN  VF GVVKIRKGLA ++IL+S +++G+H WF   A  I  +V   D +A +TV++C + MD+T   KAK     G+ M L  L+ +P +   V
Sbjct:  493 EVIADITRRMGAGMAEFVGKDLGQGTTTTVEYNRYCHFVAGMIGEGLSRLFSATGKESESLALQVELANSMGLFLQKTNIIRDYLEDYVDGRAFWPQEVWKKYSKTGQLGEFALPHFRQ--NALNCLNHLVLDALDHVEDCLKYLSLLRNPEVFRFCAIPQIMAIATMAEVYNNEKVFTGVVKIRKGLAAQLILDSSSIEGVHKWFYAFAQVIKAKVSEQDANAKKTVESCERIMDLTAD-KAKTHGVTGNKMMLVGLLVLPALGYVV 757          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S1TT08_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TT08_9STRA)

HSP 1 Score: 320 bits (821), Expect = 3.790e-101
Identity = 162/281 (57.65%), Postives = 208/281 (74.02%), Query Frame = 1
Query:    1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGP-EILDAPH-------LSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLA----VLVAVPLVASFVYLYGRR 807
            +VI DIT+RMG GMAEFV+KDLGQGT + AEYD+YCH+VAGLVG+GL+RLF  TG++   E  + P        L N MGLFLQKTNIIRDYLED+VDGRAFWPQ+VWK +A+   LGEFALP+ +  S+ LACLN LVTDALELIP+CL Y+ ++++ EVFRFCAIPQVMAIATL + YNNPDVF GVVKIRKG +C++IL+S +L+G+H WF  +A+ + RR+P SDPS  RT   C   +++T    ++   + LA    V+V +  V    YL+ R+
Sbjct:  436 EVIADITKRMGEGMAEFVTKDLGQGTTTVAEYDRYCHFVAGLVGEGLSRLFCVTGLKAARETYEDPAIESNLLALCNPMGLFLQKTNIIRDYLEDFVDGRAFWPQEVWKLYASES-LGEFALPENQ--SSALACLNHLVTDALELIPECLDYLALLRNPEVFRFCAIPQVMAIATLTKCYNNPDVFTGVVKIRKGQSCQLILDSGSLEGVHFWFYTMASDVLRRLPGSDPSFQRTEVACRTVLELTSERYSRKKFLNLAKTLNVIVPIGAVICAAYLFQRK 713          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: B8BXY6_THAPS (Squalene synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXY6_THAPS)

HSP 1 Score: 300 bits (768), Expect = 6.990e-97
Identity = 144/238 (60.50%), Postives = 182/238 (76.47%), Query Frame = 1
Query:    1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQFRQVSN-GLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPAS------DPSASRTVQTC 693
            +VI DIT+RM  GMAEFV KDLGQGTV   +Y++YCH+VAGLVG+GL+RLF+ +G+E P +    HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VWK+++++G LG FA P   + +N GL CLNELVTDALEL+PDCL Y+  ++ AEVFRFCAIPQVMAIATL + +NN DVF GVVKIRKG++C +I  + ++ G+H  FNK A  + R+   +      DPS  RT++ C
Sbjct:  203 RVISDITQRMATGMAEFVDKDLGQGTVDVQQYNRYCHFVAGLVGEGLSRLFSVSGLEQPSLATELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQSVWKKYSSSGDLGYFANPTTEEATNAGLYCLNELVTDALELVPDCLTYLSKLRCAEVFRFCAIPQVMAIATLEKCFNNGDVFTGVVKIRKGMSCMLINNTTDVLGVHGIFNKFATKVIRKAETARKSGFEDPSYDRTIKAC 440          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A8J6C1C1_DIALT (Squalene synthase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1C1_DIALT)

HSP 1 Score: 296 bits (758), Expect = 2.690e-95
Identity = 156/278 (56.12%), Postives = 195/278 (70.14%), Query Frame = 1
Query:    4 VIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEG---------PEILDAPH----LSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHAT-TGQLGEFALPQ--FRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLVASFV 789
            VI D+TRRM  GMAEFV KDLG+GT +  EY++YC+YVAGLVG+GLTRLF A G E          P ++ A H    L  SMGLFLQKTNIIRDYLEDYVDGRAFWP++VW  +AT T  LGEFA P+   +  +  LA LN LV DALEL+PDCL+YM +I H ++FRFCAIPQVMAIATL +VYNN DVF GVVK+RKGLA +MI+    + GI AWF++ A  I RR P SDPSA RT   C + + +T    A  S ++ A+++ + ++ + V
Sbjct:  167 VIADVTRRMADGMAEFVGKDLGEGTQTIDEYNRYCYYVAGLVGEGLTRLFHACGYESAQFEQRALDPALVTAQHKQGGLDKSMGLFLQKTNIIRDYLEDYVDGRAFWPKEVWSLYATDTKSLGEFAYPKPGSQVEARALALLNHLVCDALELVPDCLSYMTLITHPDIFRFCAIPQVMAIATLDKVYNNKDVFSGVVKVRKGLAVKMIMTCGTMGGIKAWFHEFAVEIKRRTPPSDPSAVRTYAACDRILTLT--ADAAPSPLRAAMILVLAIIVAAV 442          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S3UWZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWZ9_HETAK)

HSP 1 Score: 310 bits (794), Expect = 3.920e-95
Identity = 156/267 (58.43%), Postives = 197/267 (73.78%), Query Frame = 1
Query:    4 VIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHA-TTGQLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDIT--KPTKAKGSGMQLAVLVAVPLVASFVYL 795
            VI DI  RMG GM EF + DLGQGT +  +YD YCHYVAGLVG+GL+RLF+A+G E PE+     L+NSMGLFLQKTNIIRD+LEDYVDGRA+WP++VW +HA  TG LGEFALP++R   N L CLNELVTDAL    DCLAYM  +++ EVFRFCAIPQVMAIATL +VYNNPDVF GV KIRKGLA +MI+++ +  G+H +F+  A  I  RVP  DPSA++T + C   + +T  K ++ +  GM +A L+   LV +  ++
Sbjct:  715 VIADICERMGRGMGEFAAADLGQGTATLRDYDLYCHYVAGLVGEGLSRLFSASGKEAPEVAAQTTLANSMGLFLQKTNIIRDFLEDYVDGRAWWPREVWGKHAKATGLLGEFALPEYR--GNALGCLNELVTDALGHAADCLAYMEKLRNPEVFRFCAIPQVMAIATLDKVYNNPDVFTGVAKIRKGLAVKMIVDTTSKSGLHHYFHSFAQRIKSRVPVEDPSATKTHEVCDLIITLTEKKASEFRRPGMMVAGLLMACLVIALSFI 979          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S1CZR9_CYCTE (Squalene synthase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZR9_CYCTE)

HSP 1 Score: 293 bits (750), Expect = 1.710e-94
Identity = 145/270 (53.70%), Postives = 191/270 (70.74%), Query Frame = 1
Query:    1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFALPQ------FRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLVASFVY 792
            ++I DI +RM  GMAEFV KD+GQGTV   +Y++YCH+VAGLVG+GL+RLF+A+G+E P      HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VWK+++ +G LG F+  Q       R+V+  + CLNELVTDALEL PDCLAYM  ++  E+FRFCAIPQVMAIATL ++Y N DVF GVVKIRKGL+C++IL + +L  +H  F   A  I ++V   DP+  RTV+ C   +++T       +    AV+  + ++   V+
Sbjct:   91 RIIADICQRMATGMAEFVDKDMGQGTVDIPQYNRYCHFVAGLVGEGLSRLFSASGLEKPSFASELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQTVWKKYSKSGDLGYFSQLQEGGDGSIREVA--IHCLNELVTDALELAPDCLAYMSKLQCYEIFRFCAIPQVMAIATLDKLYGNADVFTGVVKIRKGLSCKLILRTNSLQQVHQIFYDHATSILKKVEQDDPNRERTVKACQAVLELTAANATSSTMSSWAVVWGLLILMGAVH 358          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A4D9D8W4_9STRA (Nudix hydrolase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W4_9STRA)

HSP 1 Score: 303 bits (775), Expect = 3.960e-94
Identity = 155/254 (61.02%), Postives = 193/254 (75.98%), Query Frame = 1
Query:    4 VIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDA-PHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTG----QLGEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPA----SDPSASRTVQTCHKAMDITKPTKAKGS 738
            VI DITRRMGAGMA+FV KDLGQGTVS  EYD YCHYVAGLVG+GLTR+FA +G+E P++  +   L+NSMGLFLQKTNIIRDYLED+VDGRAFWPQ+VWKRHA +      LG FA  + R+    LACL+ELVT+ALE +PDCLAYM  +   +VFRFCAIPQVMAIATL +VY+NPDVF GVVKIRKGLAC++ILE+ +++ ++A F+  A  IARR  A     D  +++T+Q C +   + K  +A  +
Sbjct:  443 VIKDITRRMGAGMADFVDKDLGQGTVSLQEYDLYCHYVAGLVGEGLTRMFAESGLEAPDLATSRQELANSMGLFLQKTNIIRDYLEDFVDGRAFWPQEVWKRHAPSAVPAQSLGAFAEAEHRE--RALACLDELVTNALEHVPDCLAYMSRLHTPQVFRFCAIPQVMAIATLEKVYHNPDVFTGVVKIRKGLACKLILEANSMEDLYACFSSFAGRIARRAAALEKRGDSVSAQTLQVCEEIRVLCKEGEASST 694          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A4P2PS18_9STRA (Squalene synthase n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A4P2PS18_9STRA)

HSP 1 Score: 296 bits (757), Expect = 7.090e-94
Identity = 147/266 (55.26%), Postives = 186/266 (69.92%), Query Frame = 1
Query:    1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFA-LPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPAS------DPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLV 777
            ++I DIT RM  GMAEFV+KDLGQGT    +Y++YCH+VAGLVG+GLTRLF A+G+E PEI+D   LS+ MGLFLQK NIIRDYLEDYVDGRAFWPQ +WK+++  G LG FA   +       L CLNELVTDALEL PDCLAY+  ++   VFRFCAIPQVMAIATL + YNN DVF GVVKIRKGL+C+++L++ +L+G+H  F   A  IA+R   +      DPS  RT+  C+K  ++T   +       +     +P V
Sbjct:  223 EIIADITFRMATGMAEFVNKDLGQGTTDVKQYNRYCHFVAGLVGEGLTRLFVASGLEDPEIVDKLFLSDQMGLFLQKNNIIRDYLEDYVDGRAFWPQSIWKKYSKNGDLGYFANQSEEENRKQSLKCLNELVTDALELAPDCLAYLSKLRCDGVFRFCAIPQVMAIATLDKCYNNLDVFTGVVKIRKGLSCKLLLQTNDLNGVHNTFYVFAKSIAQRAQQAKEDGIDDPSYERTMNICNKICELTDNARKTSKNRDILYHYIIPTV 488          
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Match: A0A7S2ECB1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECB1_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.210e-93
Identity = 148/258 (57.36%), Postives = 190/258 (73.64%), Query Frame = 1
Query:    1 QVIVDITRRMGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGPEILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQLGEFA-----LPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAIPQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKLAAGIARRVPASDPSASRTVQTCHKAMDIT-----KPTKAKGSGM 744
            +VI DI+ RM  GMAEFV KDLGQGT+   +Y++YCH+VAGLVG+GL+RLFA +G+E P +    HLS+ MGLFLQKTNIIRDYLEDYVDGRAFWPQ VW +++T+G LG FA     L Q    +  L CLNELVTDAL L+PDCLAY+  ++  EVFRFCAIPQVMAIATL + +NNP+VF GVVKIRKGL+C++IL + +  G+HA F   A  IA ++  +DP+A  T++ C   ++IT     + TK K +G+
Sbjct:  424 RVIADISHRMATGMAEFVGKDLGQGTLDITQYNRYCHFVAGLVGEGLSRLFAVSGLESPSMAKELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQSVWNKYSTSGDLGYFANQSDPLAQ----TKSLHCLNELVTDALSLVPDCLAYLAKLRCTEVFRFCAIPQVMAIATLDKCFNNPNVFTGVVKIRKGLSCQLILHTNDAQGVHAAFRHFANSIASKINPNDPNADATLKACDAILEITAEQHSRATKQKRTGL 677          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12562.1609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7G1_9PHAE1.510e-14279.18Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A7S2UWS2_9STRA1.870e-10460.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TT08_9STRA3.790e-10157.65Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B8BXY6_THAPS6.990e-9760.50Squalene synthase (Fragment) n=1 Tax=Thalassiosira... [more]
A0A8J6C1C1_DIALT2.690e-9556.12Squalene synthase n=1 Tax=Diacronema lutheri TaxID... [more]
A0A7S3UWZ9_HETAK3.920e-9558.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1CZR9_CYCTE1.710e-9453.70Squalene synthase n=1 Tax=Cyclophora tenuis TaxID=... [more]
A0A4D9D8W4_9STRA3.960e-9461.02Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A4P2PS18_9STRA7.090e-9455.26Squalene synthase n=1 Tax=Rhizosolenia setigera Ta... [more]
A0A7S2ECB1_9STRA1.210e-9357.36Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12562contigH-paniculata_contig12562:135..2543 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.4
Seed ortholog evalue3.2e-112
Seed eggNOG ortholog2880.D7FGX9
Preferred nameFDFT1
KEGG rclassRC00362,RC00455,RC00796,RC02839
KEGG koko:K00801,ko:K01823
KEGG ReactionR00702,R01123,R02872,R06223
KEGG Pathwayko00100,ko00900,ko00909,ko01100,ko01110,ko01130,map00100,map00900,map00909,map01100,map01110,map01130
KEGG ModuleM00095,M00096,M00364,M00365,M00366,M00367
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004310,GO:0004311,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005886,GO:0006066,GO:0006629,GO:0006644,GO:0006694,GO:0006695,GO:0006696,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016740,GO:0016765,GO:0019216,GO:0019218,GO:0019222,GO:0019637,GO:0019867,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045338,GO:0045540,GO:0046165,GO:0046890,GO:0050789,GO:0050810,GO:0051996,GO:0062012,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090181,GO:0097384,GO:0098588,GO:0098805,GO:0098827,GO:0106118,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
EggNOG free text desc.isopentenyl-diphosphate delta-isomerase activity
EggNOG OGsCOG1443@1,COG1562@1,KOG0142@2759,KOG1459@2759
EC2.5.1.21,5.3.3.2
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006
Exons4
Model size810
Cds size783
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12562.1609.1prot_H-paniculata_contig12562.1609.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12562 162..2543 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928980.1986156-UTR-H-paniculata_contig12562:134..1611622928980.1986156-UTR-H-paniculata_contig12562:134..161Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12562 135..161 +
1691480688.8634522-UTR-H-paniculata_contig12562:134..1611691480688.8634522-UTR-H-paniculata_contig12562:134..161Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12562 135..161 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928980.2126358-CDS-H-paniculata_contig12562:161..3431622928980.2126358-CDS-H-paniculata_contig12562:161..343Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 162..343 +
1691480688.8752208-CDS-H-paniculata_contig12562:161..3431691480688.8752208-CDS-H-paniculata_contig12562:161..343Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 162..343 +
1622928980.2250824-CDS-H-paniculata_contig12562:660..8101622928980.2250824-CDS-H-paniculata_contig12562:660..810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 661..810 +
1691480688.8899333-CDS-H-paniculata_contig12562:660..8101691480688.8899333-CDS-H-paniculata_contig12562:660..810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 661..810 +
1622928980.2386174-CDS-H-paniculata_contig12562:1322..14461622928980.2386174-CDS-H-paniculata_contig12562:1322..1446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 1323..1446 +
1691480688.8984835-CDS-H-paniculata_contig12562:1322..14461691480688.8984835-CDS-H-paniculata_contig12562:1322..1446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 1323..1446 +
1622928980.2501311-CDS-H-paniculata_contig12562:2216..25431622928980.2501311-CDS-H-paniculata_contig12562:2216..2543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 2217..2543 +
1691480688.906244-CDS-H-paniculata_contig12562:2216..25431691480688.906244-CDS-H-paniculata_contig12562:2216..2543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12562 2217..2543 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12562.1609.1

>prot_H-paniculata_contig12562.1609.1 ID=prot_H-paniculata_contig12562.1609.1|Name=mRNA_H-paniculata_contig12562.1609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MGAGMAEFVSKDLGQGTVSTAEYDKYCHYVAGLVGDGLTRLFAATGVEGP
EILDAPHLSNSMGLFLQKTNIIRDYLEDYVDGRAFWPQDVWKRHATTGQL
GEFALPQFRQVSNGLACLNELVTDALELIPDCLAYMRMIKHAEVFRFCAI
PQVMAIATLAEVYNNPDVFRGVVKIRKGLACRMILESRNLDGIHAWFNKL
AAGIARRVPASDPSASRTVQTCHKAMDITKPTKAKGSGMQLAVLVAVPLV
ASFVYLYGRR*
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mRNA from alignment at H-paniculata_contig12562:135..2543+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12562.1609.1 ID=mRNA_H-paniculata_contig12562.1609.1|Name=mRNA_H-paniculata_contig12562.1609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2409bp|location=Sequence derived from alignment at H-paniculata_contig12562:135..2543+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTATTGTGGATATCACCCGGCGCATGGGAGCCGGGATGGCTGAGTT CGTGTCGAAGGACCTTGGTCAGGGCACTGTCTCTACTGCGGAGTACGACA AATACTGTCACTACGTGGCTGGGCTCGTTGGAGATGGACTGACTCGACTA TTCGCCGCCACCGGTGTAGAAGGGCCGGAAATACTGGACGCTCCGCACCT TTCGAACAGGTGTGTGTCATAGTTAGATACAGTACAGGGGATATAGATCA ACTCTTAGGTTTGGCGAAATTGCAAATTTTTACTTTAGAGTGGTGAGCCG AGGACTTGGCCATGTTCCCACGAATTCGTGACAGACAAAAAAATATTTTG ATGTTGTGTATCTCGCATGATTTATAATTTTATAATTTAGATGCTGTCGT GTCTTCGTCGTCTAATTTCGTGGAAGGATGTTGTGGGCCGAGGTTATCGT AGCGAAGTGCAGTCAACATGCGGTGGCTGTCTAAGCTCACCCCTTATTCG GGTTTATTGCCTTCGCGGCGTTCCAGCATGGGTCTTTTTTTGCAGAAGAC GAACATTATTCGGGATTACCTCGAAGACTACGTGGACGGACGCGCGTTTT GGCCTCAGGATGTTTGGAAAAGGCACGCGACCACTGGCCAGCTGGGGGAG TTTGCTCTGCCTCAGTTCAGGCAAGTGTTGCGCCCTGCTCGTGCTGTGAC TTGATGCCATATATGTTGGCATTCCCGAGGCGAAATAATCCCTGTCGTAA ATAGATACCACGCGTACCGTGCCCATATGGCGTCTCGTGCTTCTTTATCA TCGAGACCGCCTGTATTCACTACCACGTGGACACGTGGATATCGATGGCG TAAGTAGTTGTGTTGCGATTGGGTGCAAATACGTGGCCGTTGCGGAACTC AAATACCAGATGACGTGAGGAAATGGCAGTCAATCTCGGTGTGCGATTCA CTCGTTGTTTTGCCCTCAATTTGAACCTTTGTTCCGGTAGTTTGTTTACC GGCAGATCTGGTAACCTCGCTGAAGTTACCTACATATGTACGTTACGTAT GATGCCGATATGATCCAGCGTCTTACTGCTTCTACACGAACCGCCTTTGT TGCCGTTTTCAACGAGTACAGTATAAAAAGAGCGTATAACACCAAAAATA TTTTTCGCTCTTGCTTTAACTCGACCGTGCTGCGACAGGTCAAATGGATT GGCCTGCTTGAATGAGCTCGTGACGGACGCCTTGGAGCTAATTCCTGATT GCCTTGCTTACATGCGCATGATCAAACATGCAGAGGTTTTTCGCTTCTGC GCCATTCCTCAGGTGAGACTTCGATGGCCTTACGAAAGCAGCTGGAGTGA GCAACAGGCTACTCGCGGCATCAGGTGATCCTATCTCTTTCCTTGTTCGC CGCCGGGTGCTGCAGGAGCTAGCTATTCCTTGAGAGATCGCGCACACGTT TCCGGAATTCGCGTGCCCAGGTCTTCATCATAGGTTCCAAATGCCGATGT GGTAACGCTCAGTGAGTGATACCGGAATCCAATCATGGCCAATGACATTG CGCGTTTATCGCTATGTTGCTGCGGGTTGGGGGTAAAAATAGGGAAATGA TTACAAGTATGTGCGAACAGACAACAGCGGGAAAATTGTACGCACAAACG CGACGGACTGTGTAGTACAGTAGTGAGGCCAGTCGGCATGCAGTAGAGCC TTGTTACGCACGACCGAACCATCCAACAAAAATGAAAGGGGTTGCGTTGA AAATAGGGTAATGATAACCCTGTACGTCCTGCAACCCGCACATACGATGG CGTAGCAACGTTTTGATATGTCCAAAATTAAATGGTGAAGATATGGCTCA GCACCACCACGCACAGCAGCTCTTGCCTTGAACGGAAATACCGATCGACG CAAAAAAAAAGCGCTAGAGAGCTGCACGTCTACCCGCGCCGCTCCTCAAC GTGTGACATGGATGGAATACCACTTCCGGAATCAAATAGTGCTGGCTGCC CATACTTCGCCATTTTGAGAGAATGACGTTGCCAATGACGAAAGTGCAAT TACGTTGATTCGCATGCGTACGTCCCTATCAGGTCATGGCGATCGCTACG CTTGCTGAAGTGTACAACAACCCGGATGTGTTTCGCGGAGTGGTGAAAAT TCGCAAGGGACTCGCATGCCGTATGATTCTCGAAAGCAGAAATCTGGACG GGATTCATGCGTGGTTTAACAAGCTCGCTGCAGGCATAGCCCGCCGTGTT CCGGCCTCAGATCCATCCGCCAGTCGCACGGTCCAAACCTGCCATAAGGC GATGGACATAACAAAACCTACCAAGGCAAAAGGGTCTGGAATGCAACTAG CCGTCCTTGTTGCAGTCCCGCTTGTGGCTAGCTTCGTCTACTTGTATGGT CGAAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig12562:135..2543+

>mRNA_H-paniculata_contig12562.1609.1 ID=mRNA_H-paniculata_contig12562.1609.1|Name=mRNA_H-paniculata_contig12562.1609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig12562:135..2543+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAGCCGGGATGGCTGAGTTCGTGTCGAAGGACCTTGGTCAGGGCAC
TGTCTCTACTGCGGAGTACGACAAATACTGTCACTACGTGGCTGGGCTCG
TTGGAGATGGACTGACTCGACTATTCGCCGCCACCGGTGTAGAAGGGCCG
GAAATACTGGACGCTCCGCACCTTTCGAACAGATGGGAGCCGGGATGGCT
GAGTTCGTGTCGAAGGACCTTGGTCAGGGCACTGTCTCTACTGCGGAGTA
CGACAAATACTGTCACTACGTGGCTGGGCTCGTTGGAGATGGACTGACTC
GACTATTCGCCGCCACCGGTGTAGAAGGGCCGGAAATACTGGACGCTCCG
CACCTTTCGAACAGCATGGGTCTTTTTTTGCAGAAGACGAACATTATTCG
GGATTACCTCGAAGACTACGTGGACGGACGCGCGTTTTGGCCTCAGGATG
TTTGGAAAAGGCACGCGACCACTGGCCAGCTGGGGGAGTTTGCTCTGCCT
CAGTTCAGGCAAGTCATGGGTCTTTTTTTGCAGAAGACGAACATTATTCG
GGATTACCTCGAAGACTACGTGGACGGACGCGCGTTTTGGCCTCAGGATG
TTTGGAAAAGGCACGCGACCACTGGCCAGCTGGGGGAGTTTGCTCTGCCT
CAGTTCAGGCAAGTGTCAAATGGATTGGCCTGCTTGAATGAGCTCGTGAC
GGACGCCTTGGAGCTAATTCCTGATTGCCTTGCTTACATGCGCATGATCA
AACATGCAGAGGTTTTTCGCTTCTGCGCCATTCCTCAGGTCAAATGGATT
GGCCTGCTTGAATGAGCTCGTGACGGACGCCTTGGAGCTAATTCCTGATT
GCCTTGCTTACATGCGCATGATCAAACATGCAGAGGTTTTTCGCTTCTGC
GCCATTCCTCAGGTCATGGCGATCGCTACGCTTGCTGAAGTGTACAACAA
CCCGGATGTGTTTCGCGGAGTGGTGAAAATTCGCAAGGGACTCGCATGCC
GTATGATTCTCGAAAGCAGAAATCTGGACGGGATTCATGCGTGGTTTAAC
AAGCTCGCTGCAGGCATAGCCCGCCGTGTTCCGGCCTCAGATCCATCCGC
CAGTCGCACGGTCCAAACCTGCCATAAGGCGATGGACATAACAAAACCTA
CCAAGGCAAAAGGGTCTGGAATGCAACTAGCCGTCCTTGTTGCAGTCCCG
CTTGTGGCTAGCTTCGTCTACTTGTATGGTCGAAGGTAAGTCATGGCGAT
CGCTACGCTTGCTGAAGTGTACAACAACCCGGATGTGTTTCGCGGAGTGG
TGAAAATTCGCAAGGGACTCGCATGCCGTATGATTCTCGAAAGCAGAAAT
CTGGACGGGATTCATGCGTGGTTTAACAAGCTCGCTGCAGGCATAGCCCG
CCGTGTTCCGGCCTCAGATCCATCCGCCAGTCGCACGGTCCAAACCTGCC
ATAAGGCGATGGACATAACAAAACCTACCAAGGCAAAAGGGTCTGGAATG
CAACTAGCCGTCCTTGTTGCAGTCCCGCTTGTGGCTAGCTTCGTCTACTT
GTATGGTCGAAGGTAA
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