prot_H-paniculata_contig801.16036.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig801.16036.1
Unique Nameprot_H-paniculata_contig801.16036.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1339
Homology
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BLAST of mRNA_H-paniculata_contig801.16036.1 vs. uniprot
Match: D8LEV6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEV6_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 2.600e-27
Identity = 199/503 (39.56%), Postives = 226/503 (44.93%), Query Frame = 0 
Query:  883 DRAAGGDR----RGGG--------GVPTGRGVVRERDPPDSPRDRGRYNPTPPQPPPLIGAGDQQ-GSGTLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------HKRPRSPEAPSMELDSESPSPPPRGIGSCSREQQDPKQPQQQSKALRGSGECNNRSPHRSTWDPQSSPSATSDQPSDPHF-----GGSDGGGRYAKLNQHPP---PLPSPPSSSARTHTPGTWAPHPLPGTSLHPTSRHXXXXXXXXXQSPGSGAAAGTAGRSGRYTPTQQHPSEHAGXXXXXTQAAAGARTSQHGASGSNASPGALAGHSRGSPLL----------------------------PRXXXXXXXXXXXXXXXXXXXXXXXXXALGPHGARSSPAGALPVPAKSGETARSGALSGWVSAAGGXXXXXXXXXXXXXXXSTNGGARRGRGPVITDRSVLLKAEFLELHDMLLESDFQWEESQRFCEVLKLRLDQLMLAP 1330
            DR  GGDR    RG G         +P GRGVVRERD PDSPRDRGRYNPTPPQPPPL+ + +   GSGTLS                                   XXXX      +KRPRSPE  +M+L+ +SPSPP RG G    +Q             RG+   ++R+ HR  WD +S+P      P DP       GG  GGG +A+ +QH     PL + P                            XXXXXXXXX            GR GR T    HP  H                 + G  G    P A    +RGSPL+                              XXXXXXXXXXXX             ALGPHG+RSSP        K GE  R        SAA G      XXXXXXXXX         R PVITDR + LKAEFLELHDML+ESDFQWEESQRFCEVLKL+LDQLML P
Sbjct:  787 DRGVGGDRGGPYRGNGHXXXXXXXSLPGGRGVVRERDRPDSPRDRGRYNPTPPQPPPLMSSAEHSHGSGTLSVSARRASLGYPLGGGRNGGDWQDRNAGGMPGQMGGXXXXXXXXXXYKRPRSPEPVAMDLEEDSPSPP-RGRGQEFLKQD-----------FRGNNYADSRN-HRPGWDGRSTP------PGDPSSRYAMEGGGSGGGNHAR-HQHQQGMHPLANGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXMGRLGRTT---GHPPMHP----------------ERGGVGPRLGPNAH--QNRGSPLVGGSVGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSPLSMHSASPLALGPHGSRSSPVSGQ----KGGEEGRG-------SAAAGDGDSVAXXXXXXXXXXXXXXXXXXRPPVITDRLISLKAEFLELHDMLMESDFQWEESQRFCEVLKLQLDQLMLVP 1235
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig801.16036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEV6_ECTSI2.600e-2739.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig801contigH-paniculata_contig801:3828..22126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig801.16036.1mRNA_H-paniculata_contig801.16036.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig801 3828..22404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig801.16036.1 ID=prot_H-paniculata_contig801.16036.1|Name=mRNA_H-paniculata_contig801.16036.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1339bp
MNRRSSQGVPKGGYGSLACAPARRRSRSRSRSPPQSVSSSSGRSRSRSTR
SSRDRARRRRRRRRRRSRSESSSSSDSSSSSSSDSRASIHPHSIHPQSAG
HSRSRSVRSLAIAGGGGPYYGNKHGGPGGGSGHNGTMLGMGGPQGMAMPM
QMGLAMHMSAGTVHMGGPMHMGGGNMVGSPMNLGAIGGGGGGKDYASMAK
ESFPLRGGATGMMAGCSGGLGGGHSGGGGGRGFLGTQVHHHNGGPISRPV
ATLPTGKDYASLASGGGTGSGDSYLDKRGGGSGGGGGGGGGVGGYLEQAQ
PRDVRKVGRVGGAGMSGRPSEVSSRSGGSGGAGAGGHGGRFDRAGGKQSP
PSPPPPLGRDQFGRERDWRGNVANGRRAGASPSSGQPPVVHGSGFGTFSI
AQAIPLNSSKAGGGSLAGAKPRGSTASSLAPVNRASRSPTSSSRGGDRAE
MGGGGGAEAGAVLTRADQVREHSRREQRQRQMMDQRPPASSSQSDQRPPP
GKVSPSPQQQKRGSSSERRQRVSPDEQQQRKDRDDEHEDDNSISSRRGRG
GGGSGSSSPACTDERRKEQRERDRNGQAPSSKHPRENNGRISVGAAASAN
QRSCGEAGGQENGKSESATVTLCSGLVPVLSSSKVHSIKGNGNDADNSNS
TASNMEGSSQHGAGTRAPNGISSSSSNTSAGGDSRHNSSSSSSSSSSSSS
SSSSSSSTTTTANADHRHHREKTSTSGGGAGSSAPGCTKSTNEPESDTKS
VNAGAGGAGGSGGNKSPTRRGAVANGSGSTANGGLSLRDRVERERALPGD
LPGDRSDRSRPPPPPQPRARLGLGQGLLTRNSKNNISGSNLALGGSDGES
QQREWEGDSRGSGGSSWNSKRDGGGYRGGVEYDRAAGGDRRGGGGVPTGR
GVVRERDPPDSPRDRGRYNPTPPQPPPLIGAGDQQGSGTLSAAARRATFG
YHQHSSSRNNERQDNGVSEGGGSSRGGGGGHKRPRSPEAPSMELDSESPS
PPPRGIGSCSREQQDPKQPQQQSKALRGSGECNNRSPHRSTWDPQSSPSA
TSDQPSDPHFGGSDGGGRYAKLNQHPPPLPSPPSSSARTHTPGTWAPHPL
PGTSLHPTSRHHHTTSSRRAQSPGSGAAAGTAGRSGRYTPTQQHPSEHAG
GGGGATQAAAGARTSQHGASGSNASPGALAGHSRGSPLLPRGSPVLPSGA
QGAPQGSPIPPHGSPLALGPHGARSSPAGALPVPAKSGETARSGALSGWV
SAAGGGGDGEGGGGGGGEGSSTNGGARRGRGPVITDRSVLLKAEFLELHD
MLLESDFQWEESQRFCEVLKLRLDQLMLAPIPRSSPHR*
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