prot_H-paniculata_contig1255.1601.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1255.1601.1
Unique Nameprot_H-paniculata_contig1255.1601.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
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BLAST of mRNA_H-paniculata_contig1255.1601.1 vs. uniprot
Match: A0A6H5JHD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD3_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.310e-11
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 0 
Query:    7 DPCAGAMAAYLKCVEGKTAGLRDGDECAEEGSEYKACRQRVKAAKR 52
            DPC  AM AY++CVEGK  GLRDGDEC  E   YK CRQ V+ AK+
Sbjct:   14 DPCLEAMGAYVRCVEGKADGLRDGDECTAEVEAYKKCRQLVREAKK 59
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1255.1601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHD3_9PHAE1.310e-1163.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51808CHCHcoord: 6..51
score: 10.82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1255contigH-paniculata_contig1255:330..1112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1255.1601.1mRNA_H-paniculata_contig1255.1601.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1255 245..1543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1255.1601.1 ID=prot_H-paniculata_contig1255.1601.1|Name=mRNA_H-paniculata_contig1255.1601.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
MRDDRIDPCAGAMAAYLKCVEGKTAGLRDGDECAEEGSEYKACRQRVKAA
KRGNSTSNTTSTAVLAKGEKSLR*
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