prot_H-paniculata_contig7969.15993.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig7969.15993.1
Unique Name	prot_H-paniculata_contig7969.15993.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	203

Homology

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BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5KEM9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM9_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 6.890e-80
Identity = 119/187 (63.64%), Postives = 138/187 (73.80%), Query Frame = 0

Query:   11 SGEASRRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            + + +RR PRWPL SLPL S PGEMV+FD+LGP P T R N Y+LLVVDL SRHA P ALS  EK A+GCAS LA+++ TRW CP  LLSDR  E T  V  +VY + G KK  T+ FH QTNGCVERLNHTVCQML HVI +QQ +W + LL  VY HNNH+S+ TGLAP E HI RYPR PMT+L
Sbjct:   17 ASKTARRKPRWPLFSLPLPSRPGEMVAFDILGPLPTTKRGNKYVLLVVDLFSRHAIPYALSADEKTAQGCASKLADDHCTRWGCPVYLLSDRGGEITAAVARDVYRLPGAKKRFTNSFHPQTNGCVERLNHTVCQMLSHVISAQQTDWDDHLLPCVYAHNNHVSKATGLAPMEVHIGRYPRFPMTVL 203

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5J755_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J755_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 3.410e-78
Identity = 123/187 (65.78%), Postives = 142/187 (75.94%), Query Frame = 0

Query:   11 SGEASRRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            + + +RR PRWPLISLPL S PGEMV+FD+LGP P T   N Y+LLVVDL SRHAEP ALS  EK A+GCAS LA++Y TRW CP  LLSDR  EFT  V  +VY +LG KK  TS FH Q+NGCVERLNHTVCQML HVI +QQ +W + LL  VY HNNH+S+ TGLAP E HI RYPR+PMT+L
Sbjct:  130 ASKTARRRPRWPLISLPLPSRPGEMVAFDILGPLPTTKSGNKYVLLVVDLFSRHAEPYALSADEKTAQGCASKLADDYCTRWGCPVYLLSDRGGEFTAAVARDVYRLLGAKKRFTSSFHPQSNGCVERLNHTVCQMLSHVISAQQTDWDDHLLPCVYAHNNHVSKATGLAPMEVHIGRYPRLPMTVL 316

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BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5K3K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K5_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 5.340e-77
Identity = 124/187 (66.31%), Postives = 146/187 (78.07%), Query Frame = 0

Query:   11 SGEASRRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            + + SRR  RWPL+SLPL S PGEMV+FD+LGP PKT R N YILLVVDL SRH EP AL++ EK ++GC + LA++YV RW CP+ LLSDR AEFT +V ++VY MLG KK  TS FH  TNGCVERLNHTVCQML HV+ SQQ +W E LLQV Y HNNH+S+ TGLA +E HI RYPR+PMTIL
Sbjct: 1025 ASKTSRRAHRWPLVSLPLPSRPGEMVAFDILGPLPKTKRGNVYILLVVDLFSRHVEPYALTSEEKRSQGCVTKLADDYVVRWGCPKYLLSDRGAEFTARVAKDVYRMLGAKKRYTSSFHPHTNGCVERLNHTVCQMLYHVVSSQQTDWDEYLLQVCYCHNNHVSKATGLAASEIHIGRYPRLPMTIL 1211

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.280e-76
Identity = 124/187 (66.31%), Postives = 145/187 (77.54%), Query Frame = 0

Query:   11 SGEASRRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            + + SRR  RWPL+SLPL S PGEMV+FD+LGP PKT R N YILLVVDL SRH EP AL++ EK A+GCA+ LA++ V RW CP+ LLSDR AEFT +V ++VY MLG KK  TS  H  TNGCVERLNHTVCQML HV+ SQQ +W E LLQV Y HNNH+S+ TGLA +E HI RYPR+PMTIL
Sbjct:  716 ASKTSRRAHRWPLVSLPLPSRPGEMVAFDILGPLPKTKRGNMYILLVVDLFSRHVEPYALTSEEKTAQGCATKLADDCVVRWGCPKYLLSDRGAEFTARVAKDVYRMLGAKKRFTSSSHPHTNGCVERLNHTVCQMLSHVVCSQQTDWDEYLLQVCYCHNNHVSKATGLAASEIHIGRYPRLPMTIL 902

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5JW90_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW90_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 4.850e-67
Identity = 104/182 (57.14%), Postives = 126/182 (69.23%), Query Frame = 0

Query:   16 RRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            R    WPL+SLPL S PG+MVSFD LGP PKT +DN Y+  VVDL SRHAE   L+  +K AKG  S++ N+Y  RW CP  +LSDR AEF  +V + V+ +LG  K  TS +H QTNG VERLNHT+CQML H+I   Q NW E+L      HNN++S+ TGLAPN  HI RYPR+PMTIL
Sbjct:   56 RHTKCWPLVSLPLPSRPGQMVSFDYLGPLPKTTKDNEYVFPVVDLFSRHAEGYPLTKAQKNAKGIVSIMVNDYSARWGCPHTMLSDRGAEFANEVAKGVFKLLGTVKKFTSSYHPQTNGMVERLNHTLCQMLSHLIADDQANWDEMLPHAAAAHNNNVSRRTGLAPNVVHIGRYPRLPMTIL 237

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5KPU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPU9_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 3.510e-66
Identity = 114/187 (60.96%), Postives = 133/187 (71.12%), Query Frame = 0

Query:   11 SGEASRRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            + + +RR PRWPLISLPL S PGEMV+FD+LGP P T R N Y+LLVVDL SRHAEP ALS  EK  +GCAS LA++Y TRW+    LLSDR  EFT  V  +VY +L   K  TS FH QTNGCVERLNHTVCQML  VI + Q +W +  L  VY HNNH+S+ T L P E HI RY R+PMT+L
Sbjct:  762 ASKTARRKPRWPLISLPLPSRPGEMVAFDILGPLPTTKRGNKYVLLVVDLFSRHAEPYALSADEKRDQGCASKLADDYCTRWERTVYLLSDRGGEFTAAVARDVYRLLAANKRFTSSFHPQTNGCVERLNHTVCQMLSDVIIAPQTDWDDHPLPCVYAHNNHVSKATDLVPMEVHIGRYLRLPMTVL 948

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 4.250e-66
Identity = 110/186 (59.14%), Postives = 133/186 (71.51%), Query Frame = 0

Query:   16 RRVPR----WPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            R+VPR    WPL+SLPL S PG+MVSFD LGP PKT +DN Y+ LVVDL SRHAE   L+  +K AKG  S++ N+Y+ RW CP  +LSDR AEF  +V + VY MLG  K  TS +H QTNG VERLNHT+CQML H++   Q NW E+L   V  HNN++S+ TGLAPN  HI RYPR+PMTIL
Sbjct:  539 RKVPRHTKCWPLVSLPLPSRPGQMVSFDYLGPLPKTTKDNEYVFLVVDLFSRHAEGYPLTKAQKNAKGFVSIMVNDYIARWGCPHTMLSDRGAEFANEVAKGVYKMLGTVKKFTSSYHPQTNGMVERLNHTLCQMLSHLVADDQANWDEMLPHAVAAHNNNVSRGTGLAPNVVHIGRYPRLPMTIL 724

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5JKZ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ8_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.420e-64
Identity = 103/182 (56.59%), Postives = 125/182 (68.68%), Query Frame = 0

Query:   16 RRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            R   RWPL+SL L S PGEMV+FD LGP P+T +   Y+ LVVDL SR+AE  AL+  EK A+GC+++L   Y+ RW CP   LSDR AEFT  V  E+Y M G  K  TS +H QTNG VERLNHT+CQML H+I   Q NW E L   +  HNN++S+ TGL+PNE HI RY R+PMTIL
Sbjct:   84 RHTRRWPLVSLSLPSRPGEMVAFDFLGPLPQTKKGRQYVFLVVDLFSRYAEAYALTAAEKTAQGCSAILVQQYIPRWGCPHTFLSDRGAEFTAPVSREIYRMQGTVKMFTSSYHPQTNGMVERLNHTLCQMLSHLIADDQKNWDEYLSTAIAAHNNNMSRGTGLSPNEIHIGRYTRLPMTIL 265

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5K9D1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D1_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.830e-59
Identity = 95/163 (58.28%), Postives = 114/163 (69.94%), Query Frame = 0

Query:   35 MVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            MVSFD LGP PKT +DN Y+ LVVDL SRHAE   L+  +K AKG  S++ N+Y+ RW CP  +LSDR AEF  +V + VY MLG  K  TS +H QTNG  ERLNHT+CQML H+I   Q N  E+L   V  HNN++SQ TGLAPN  HI RYP++PMTIL
Sbjct:    1 MVSFDYLGPLPKTTKDNEYVFLVVDLFSRHAEGYPLTKAQKNAKGFVSIMVNDYIARWGCPHTMLSDRGAEFANEVTKGVYKMLGTVKKFTSSYHPQTNGMAERLNHTLCQMLSHLIADDQANGDEMLPHAVAAHNNNVSQGTGLAPNVVHIGRYPKLPMTIL 163

[Close]

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Match: A0A6H5KNM9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM9_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 4.000e-58
Identity = 95/164 (57.93%), Postives = 116/164 (70.73%), Query Frame = 0

Query:   35 MVSFDLLGPFPKTARDNSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLSDREAEFTPKVVEEVYHM-LGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHVIGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTIL 197
            MVSFD LGP PKT +DN Y+ LVVDL SRHAE   L+  +K AKG  S++ N+Y+ RW CP  +LSDR A+F  +V + VY M LG  K  TS +H QTNG VERLNHT+CQML H++   Q NW E+L   V  HNN++S+ TGLAPN  HI RYPR+PMTIL
Sbjct:    1 MVSFDYLGPLPKTTKDNEYVFLVVDLFSRHAEGYPLTKAQKNAKGFVSIMVNDYIARWGCPHTMLSDRGADFANEVAKGVYKMMLGTVKKFTSSYHPQTNGMVERLNHTLCQMLSHLVADDQANWDEMLPHAVAAHNNNVSRGTGLAPNVVHIGRYPRLPMTIL 164

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig7969.15993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KEM9_9PHAE	6.890e-80	63.64	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J755_9PHAE	3.410e-78	65.78	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K3K5_9PHAE	5.340e-77	66.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KJH5_9PHAE	2.280e-76	66.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JW90_9PHAE	4.850e-67	57.14	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KPU9_9PHAE	3.510e-66	60.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWR4_9PHAE	4.250e-66	59.14	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JKZ8_9PHAE	1.420e-64	56.59	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K9D1_9PHAE	1.830e-59	58.28	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KNM9_9PHAE	4.000e-58	57.93	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 22..201 e-value: 9.7E-37 score: 128.1
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 31..145 e-value: 9.4E-12 score: 45.2
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 28..189 score: 17.651
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 22..193
None	No IPR available	PANTHER	PTHR24559:SF275		coord: 22..193
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 27..186

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig7969	contig	H-paniculata_contig7969:708..1316 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig7969.15993.1	mRNA_H-paniculata_contig7969.15993.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig7969 138..6734 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig7969.15993.1 ID=prot_H-paniculata_contig7969.15993.1|Name=mRNA_H-paniculata_contig7969.15993.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MVAAKLFRLSSGEASRRVPRWPLISLPLSSGPGEMVSFDLLGPFPKTARD
NSYILLVVDLSSRHAEPNALSNGEKAAKGCASLLANNYVTRWDCPQILLS
DREAEFTPKVVEEVYHMLGLKKCLTSYFHSQTNGCVERLNHTVCQMLLHV
IGSQQDNWGELLLQVVYTHNNHISQPTGLAPNEAHIDRYPRMPMTILTHN
IK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf