prot_H-paniculata_contig783.15854.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig783.15854.1
Unique Name	prot_H-paniculata_contig783.15854.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	293

Homology

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BLAST of mRNA_H-paniculata_contig783.15854.1 vs. uniprot
Match: D7FKK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKK1_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.060e-42
Identity = 95/254 (37.40%), Postives = 142/254 (55.91%), Query Frame = 0

Query:    1 MSSWKKMTAAVDVSAQKFLSNKRFSRERRTFTWDWHFWNLAIACTPGLLLWAWLHQVEKQVLEEERIRLEVQERTGVSSRGYMVPTKQAREEARDMLRKGNTKGRDLLHSGADGGGAATPVRVTSEAQKTSANDGQNTLTLQRFISHQRKLQQRLDAVEKKLGLESPTGSEETTSLHRIGTEPAREVLRSDNSPYNSEEANEDKGSALETLGKAAGKAVEVATVVGTWVVDVGLPQGIELYRTAREWLADDERK 254
            M+ WK+ T AVD SAQ FL NK+FSRE+R FTWDWH WNLA   TP L+L  +LH VEKQ+LE+  IR E+QERTGVSSRG+++P K+ REE   ML  GN  G    ++G +GG     +         S +      T++R +S    +Q    +     G+++ +G    ++L   GT  + +  R  ++   + +A+   G+ + TL +A    +E  +  G+W++  G  QG       R W+A+DER+
Sbjct:    1 MAIWKRFTGAVDSSAQSFLKNKKFSREKRKFTWDWHAWNLAFVSTPSLVLAYYLHGVEKQMLEDAAIREEIQERTGVSSRGFLIPKKEVREEVLGMLSAGNQPG----NAGGEGGAGEQQLGHERHVPADSESIEGRLATIERMLS----MQGGSSSSTPGAGIDNGSGPMTDSTLS--GTSGSGQGKRVHSARNAASKADSSSGAEVSTLDRA----IETVSAAGSWLLQTGEAQGKXXXXXGRSWMAEDERQ 240

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig783.15854.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig783.15854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FKK1_ECTSI	1.060e-42	37.40	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..161
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 55..292
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..54
None	No IPR available	TMHMM	TMhelix		coord: 35..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig783	contig	H-paniculata_contig783:14367..20963 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig783.15854.1	mRNA_H-paniculata_contig783.15854.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig783 14303..21148 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig783.15854.1 ID=prot_H-paniculata_contig783.15854.1|Name=mRNA_H-paniculata_contig783.15854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=293bp
MSSWKKMTAAVDVSAQKFLSNKRFSRERRTFTWDWHFWNLAIACTPGLLL
WAWLHQVEKQVLEEERIRLEVQERTGVSSRGYMVPTKQAREEARDMLRKG
NTKGRDLLHSGADGGGAATPVRVTSEAQKTSANDGQNTLTLQRFISHQRK
LQQRLDAVEKKLGLESPTGSEETTSLHRIGTEPAREVLRSDNSPYNSEEA
NEDKGSALETLGKAAGKAVEVATVVGTWVVDVGLPQGIELYRTAREWLAD
DERKSAIASINLEAAAAASFSHRQSPHLRQQTRLLSSTYGRM*