mRNA_H-paniculata_contig7829.15852.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: D8LE55_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE55_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.190e-78 Identity = 130/194 (67.01%), Postives = 152/194 (78.35%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGLPEWPWWPRIERRRDIMRVEKGVDDRLLAGLAADLCGFSGREVK 582
A CSGMDCA+MSGGDV PLG +AVTELH LFRWA KS RGLLLFIDEAEAFLGKR P+MSE TRNALNALLYNTG+ S RLMMVLATNRAEDLDEAVLDRMDD+LLFPIPD+++RA+LLVQYFHKYC++G +S G+ GL WW + + ++ GVD+RL+ GLA ++ GFSGREV+
Sbjct: 283 AACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATG------KDGRSIGAGWGLSSKISGWWRGSS--AEGLTIDVGVDERLVKGLAEEVQGFSGREVE 468
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A835Z4U6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U6_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.420e-60 Identity = 114/195 (58.46%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGLPEW--PWWPRIERRRDIMRVEKGVDDRLLAGLAADLCGFSGREV 579
A CSGMD AIMSGGDVGPLG DAVTELH LF WA +S RG+LLFIDEAEAFLG R S +SEDTRNALNALLY TGT SH M+VLATNRAEDLDEAVLDRMDD+LLFP+PD R +LL YF Y +S + +S G R GL W W R + V+ G+ + + + GFSGRE+
Sbjct: 246 AACSGMDYAIMSGGDVGPLGKDAVTELHSLFAWARRSKRGVLLFIDEAEAFLGSRSSSTLSEDTRNALNALLYQTGTASHSFMLVLATNRAEDLDEAVLDRMDDSLLFPLPDVEARRQLLALYFRSYIASLV------ASPDDGERQGL---RWLVRWGGGCAGR---ITVDAGIGEDQVCSFTKQVEGFSGREI 428
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A6H5JZK9_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK9_9PHAE) HSP 1 Score: 177 bits (449), Expect = 1.610e-49 Identity = 114/213 (53.52%), Postives = 138/213 (64.79%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDT------LLF----PIPDKRTR------ARLLV---QYFHKYCSSGLRERENSSSKSRGSRAGLGLPEWPWWPRIERRRDIMRVEKGVDDRLLAGLAADLCGFSGREVK 582
A SGMDCA+MSGGDV PLG +AVTELH LFRWA KS RGLLLFIDEAEAFLGKR P+MSE TRNALNALLYNTG+ S RLMMVLATNRAE +++ L+ LLF + D+ +RLLV QYFHKYC++G ++ SS G GL WW + + ++ GVD+ L+ GLA ++ GFSGREV+
Sbjct: 275 AAYSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE-VNKHQLEVSSTAPGPGGHLLFIRSIVLHDRTVLLLVHVVSRLLVSLSQYFHKYCATG----KDGSSIDTGW--GLFSKLSRWWRGSS--AEGLTIDVGVDECLVKGLAEEVQGFSGREVE 478
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A482RKE4_9ARCH (AAA family ATPase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RKE4_9ARCH) HSP 1 Score: 171 bits (432), Expect = 1.910e-49 Identity = 95/193 (49.22%), Postives = 118/193 (61.14%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGLPEWPWWPRIERRRDIMRVEKGVDDRLLAGLAADLCGFSGREV 579
A+ SGMD AIMSGGDVGPLG DAVT+LH +F WA S RGLLLFIDEA+AFL R MSED RNALNALL+ TG ++R M+VLATNR DLD AV DR+D++++F +PD+ R L+ QY+ KY AG + W + R ++V+ V L LA GFSGRE+
Sbjct: 19 ARTSGMDYAIMSGGDVGPLGRDAVTQLHAMFDWATTSRRGLLLFIDEADAFLASRSRAQMSEDQRNALNALLFRTGEANNRFMLVLATNRPGDLDRAVSDRVDESIVFDLPDEPARELLIKQYYQKYIVD----------------AGKDVTGPLAW--LRRSAAAIKVDDSVTPEYLTALAKRTAGFSGREI 193
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A812LTK1_9DINO (Atad3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LTK1_9DINO) HSP 1 Score: 172 bits (437), Expect = 6.000e-48 Identity = 100/193 (51.81%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGLPEWPWWPRIERRRDIMRVEKGVDDRLLAGLAADLCGFSGREV 579
A+ SGMD AIMSGGDVGPLG +AVTELHRLF +AE+S RG+LLFIDEA+AFL R MSE+ RNALNALL+ TG S R MMVLATNR DLD AVLDR D++LLF +PD R L+ QYF KY + SS G G +R + ++ G D L +A GFSGR +
Sbjct: 262 ARSSGMDYAIMSGGDVGPLGKEAVTELHRLFDYAERSQRGMLLFIDEADAFLASRSKAAMSEEQRNALNALLFRTGEASDRFMMVLATNRPGDLDSAVLDRTDESLLFDLPDAEARKALVRQYFKKYITDA-----GSSGSGVGGLMGF------------KRSAKIILDSGFSDEWLDRVAERTEGFSGRGI 437
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A6G0Q5C4_9STRA (AAA domain-containing protein (Fragment) n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q5C4_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.100e-47 Identity = 88/153 (57.52%), Postives = 111/153 (72.55%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCS--PNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGL 453
A+ SGMD AI+SGGDVGPLG+DAVTELH LF+WA S RG+L+FIDEAEAFLG R + +MSE RNALNALLY+TGT S + M+V+ATNR EDLD AV DR+DDTL F +P+ + R RLL YF +Y + +S K + +A + +
Sbjct: 113 ARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPRGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGTQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPETKERVRLLQMYFDEYVAPLAAPPAATSLKGKTDKASVSV 265
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A7S1CAP0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAP0_9STRA) HSP 1 Score: 169 bits (428), Expect = 7.080e-47 Identity = 94/193 (48.70%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGLPEWPWWPRIERRRDIMRVEKGVDDRLLAGLAADLCGFSGREV 579
A+ G+D A+MSGGDV PLG++AVTELH+LF WA + RGLLLFIDE +AFLG R +SED RNALNALLY TGTP+ + M+V+ATNR DLD AV DR+D+ + F +PD R +LL QYF +Y G +AG GL ++R + V +DD A LA GFSGR +
Sbjct: 226 ARHCGLDYAVMSGGDVAPLGSNAVTELHKLFDWANTTGRGLLLFIDEGDAFLGSRARVGLSEDQRNALNALLYRTGTPTSKFMLVVATNRPGDLDAAVTDRIDEAMWFGLPDLELREKLLRQYFGEYLVRA------------GEKAGTGLVG-----AFKKRAARIDVAADIDDAYFADLARRTEGFSGRGI 401
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A836BDH2_9CHLO (AAA domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A836BDH2_9CHLO) HSP 1 Score: 171 bits (434), Expect = 1.000e-46 Identity = 103/196 (52.55%), Postives = 126/196 (64.29%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCS-SGLRERENSSSKSRGSRAGLGLPEWPWWPRIERRR--DIMRVEKGVDDRLLAGLAADLCGFSGREV 579
A+ SGMD AIMSGGDV PL AVT+LH+ F WAEKS RGLLLFIDEA+AFLG+R S MSE R ALNA+L+ TG S M+VLATNR DLD+AVLDRMD+ L F +PD R RLL Y KY + +G E + KS G + LG W R+ D++ +E G+++ LLA A GFS RE+
Sbjct: 372 ARTSGMDYAIMSGGDVAPLEGKAVTQLHQTFDWAEKSRRGLLLFIDEADAFLGRR-SDAMSEGLRGALNAMLFRTGDQSRDFMVVLATNRPGDLDDAVLDRMDEALEFGLPDVAERQRLLALYLDKYIAKAGTDEGGAGAGKSGGPLSRLG------WLLKGRKSAADVIEIEPGINEALLAATAKATEGFSAREL 560
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A8J2SN09_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN09_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.780e-46 Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGLPEWPWWPRIERRRDIMRVEKGVDDRLLAGLAADLCGFSGREVK 582
AK SG++ A+MSGGDVGPLG+D VT LH LFRWA S G+L+FIDEAEAFL R ++E RNALNA LY TG+P+ ++VLATNRAEDLDEAVLDR+D+TL F +P R +L+ Y+ YC+S + + + K W + R ++V K V LL +A D FSGRE++
Sbjct: 942 AKASGLEYALMSGGDVGPLGSDGVTALHTLFRWARTSETGVLVFIDEAEAFLASRSRAKLTEHMRNALNAFLYQTGSPTTSFVLVLATNRAEDLDEAVLDRVDETLYFGLPAFAARDKLVRLYYDVYCASLIERKRHFLKKI--------------WDAVRRAPASLKVTKDVTPALLGEVARDTDDFSGREIE 1121
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Match: A0A7S1G781_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G781_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.190e-46 Identity = 92/152 (60.53%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 1 AKCSGMDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRCSPNMSEDTRNALNALLYNTGTPSHRLMMVLATNRAEDLDEAVLDRMDDTLLFPIPDKRTRARLLVQYFHKYCSSGLRERENSSSKSRGSRAGLGLP 456
AK SGMD AIM+GGDVGPLG DA TELH+LF WA+ S RGLLLFIDEAEAFLG R S NMSE RN L+ALLY+TG S + M+V ATNR DLD AV DRMD+TLLFP+P + R R++ QY+ + S R + SRG+ GLP
Sbjct: 12 AKSSGMDYAIMTGGDVGPLGRDATTELHKLFEWAKTSDRGLLLFIDEAEAFLGTR-SRNMSEHLRNVLSALLYHTGEQSDKFMIVTATNRPGDLDSAVTDRMDETLLFPLPSQSERLRMVHQYYQLHILS----RADVDDASRGTG---GLP 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7829.15852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7829.15852.1 >prot_H-paniculata_contig7829.15852.1 ID=prot_H-paniculata_contig7829.15852.1|Name=mRNA_H-paniculata_contig7829.15852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp MDCAIMSGGDVGPLGNDAVTELHRLFRWAEKSSRGLLLFIDEAEAFLGKRback to top mRNA from alignment at H-paniculata_contig7829:7260..9536+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7829.15852.1 ID=mRNA_H-paniculata_contig7829.15852.1|Name=mRNA_H-paniculata_contig7829.15852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2277bp|location=Sequence derived from alignment at H-paniculata_contig7829:7260..9536+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7829:7260..9536+ >mRNA_H-paniculata_contig7829.15852.1 ID=mRNA_H-paniculata_contig7829.15852.1|Name=mRNA_H-paniculata_contig7829.15852.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig7829:7260..9536+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |