prot_H-paniculata_contig1252.1584.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1252.1584.1
Unique Nameprot_H-paniculata_contig1252.1584.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length2099
Homology
BLAST of mRNA_H-paniculata_contig1252.1584.1 vs. uniprot
Match: D7FW82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW82_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.950e-37
Identity = 192/530 (36.23%), Postives = 244/530 (46.04%), Query Frame = 0
Query:    2 ARVTAEPKRAAGPRYHHVEVLPWEGGPDKPIKLKIKAGYLAKPPSPAAAVTDATTGASAVAAPSPGLGNAMETTSGVRQGSPPDSCRSSADGSAVPVGGTKRITVVGGADGISAEDGWPEEYGGTSRPTRRVVTRKASKAAQQAAGRRDGSCSGVRDDTDNGR----DGGDEEGAVERGCK---ESEVARGGHQAGRGKLATAGNGRKKDGAVEADSGEDEMVVDEEE-RGEEXXXXXXXXXXXXXXXXXXXXXXXXXAEHEETAMKAA--------DGEVC-------FIPVGTRVVVIELPKWSEGQRGGPKPNGKVKVDELLGKTAIVKVSPTSWYSARYHKLAFVPWPGGPVDVEITWTLPRKYITVWNPTFDYVSL-VAGARESGV-PAPQPXXXXXXXXXXXXXXXXXXIPPSPGTCVAAAKLG------------YPVGTIVVVRTVDIDPGRSLKFARGEVREAGFHELLGREGKVIRQPPANAKGVRYHMVEYQPWEDGPTRPFTWNVKMAALEVVRWPDT 494
            ARV  EP    G RYH VE  PWEGGPD  + L+ KA  L   P+P  +V        A A  S G  + + T      G    +  S+A   + P G        G A  +S       +    +RP RR  TR A KA +Q+     G     +      R    +G   E A E   +   E E                  G KK  A+   SG D  + +E   +G      XXXXXXX XXXX   XXXXXX      A KA         +GE          IPVGTRVVV + P  S   RG      ++K  +L+G+T +V    T     R+H ++F PWPGGP     +W   RK + +           V+G+R +G  PA +            XXXXXXX           AK G             P GT+VVVR+V+ DPGR+LKFAR E  EAGF E+LGREG V+  P +  KG RYH+V+Y+PWE GPTRPFTWNVK+A+LEV+R P T
Sbjct:  569 ARVIREPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLK--PAPLDSVF-------APAVVSDGRDSGVST-----DGGSASARLSTARAESTPAG-------AGAAQRVS------RKTVAATRPRRRS-TRGAIKATKQSVSVDAGEAGCEQPPLATARVVKREGKGNEEAEEDDMEVDVEGEXXXXXXXXXXXXXXXXXIGAKKQSAIVHSSGGDNSMAEERVGKGRSKEEEXXXXXXXGXXXXKGQXXXXXXXXXXXVATKAVLDTMAMPKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGC-----QLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGGP-STTTSWNFARKRLALCPSGISSGGASVSGSRGAGAAPASRREGKAKGAGAEAXXXXXXXXXXXXXXXXXGAKEGGRARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLRRPRT 1064          
BLAST of mRNA_H-paniculata_contig1252.1584.1 vs. uniprot
Match: A0A6H5L1S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1S6_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 2.660e-36
Identity = 198/524 (37.79%), Postives = 245/524 (46.76%), Query Frame = 0
Query:    2 ARVTAEPKRAAGPRYHHVEVLPWEGGPDKPIKLKIKAGYLAKPPSPAAAVTDATTGASAVAAPSPGLGNAMETTSGVRQGSPPDSCRSSADGSAVPVGGTKRITVVGGADGISAEDGWPEEYGGTSRPTRRVVTRKASKAAQQAAGRRDGSCSGVRDDTDNGR----DGGDEEGAVERGCK---ESEVARGGHQAGRGKLATAGNGRKKDGAVEADSGEDEMVVDE---EERGEEXXXXXXXXXXXXXXXXXXXXXXXXXAEHEETAMKAADGEVC-------FIPVGTRVVVIELPKWSEGQRGGPKPNGKVKVDELLGKTAIVKVSPTSWYSARYHKLAFVPWPGGPVDVEITWTLPRKYITVW-----------NPTFDYVSLVAGARESGVPAPQPXXXXXXXXXXXXXXXXXXIPPSPGTCVAAAKLG---YPVGTIVVVRTVDIDPGRSLKFARGEVREAGFHELLGREGKVIRQPPANAKGVRYHMVEYQPWEDGPTRPFTWNVKMAALEVVRWPDT 494
            ARV  EP    G RYH VE  PWEGGPD  + L+ KA  L   P+P  +V       SA A  S G                 DS  S+  GSA     T R  +     G  A      +    +RP RR  TR   KA +Q+     G   G +      R    +G   + A E   +   E E                    KK  A+    GE   +  E   + R EE  XXXXXXXXXXXXXXXXXX     A   +T     +GE          IPVGTRVVV + P  S   RG      ++K  +L+G+T +V    T     R+H ++F PWPGGP     +W   RK + +            + T    +  A  RE          XXXXXXXXXXXXXXXX     G             P GT+VVVR+V+ DPGR+LKFAR E  EAGF E+LGREG V+  P +  KG RYH+V+Y+PWE GPTRPFTWNVK+A+LEV+R P T
Sbjct:  569 ARVIQEPTHRMGQRYHLVEFQPWEGGPDTVVTLRAKAKLLK--PAPLDSV-------SAPAVVSDGR----------------DSGVSTDGGSARARLSTARAEIT--PSGAGAAQRVSRKTVAATRPRRRS-TRGTIKATKQSVSVDAGEAGGEQPPPATARVVKREGKGNKEAEENDMEVDVEGEXXXXXXXXXXXXXXXDAISDKKQSAIIHSPGEYSSMTKERVGKGRSEEEKXXXXXXXXXXXXXXXXXXEGVAIAAVLDTMAMPKEGEPLDDPRKPMLIPVGTRVVVKQAPAESSRPRGC-----QLKTSDLVGRTGVVTKMATHVQGTRHHMVSFEPWPGGP-STTTSWNFARKRLALCPSGIGSGGASVSGTRGVGAAPASRREGNAKGAAAGAXXXXXXXXXXXXXXXXXXXXXGGAARPTPPNTENLPAGTVVVVRSVETDPGRTLKFARDETYEAGFQEVLGREGIVVSGPTSTTKGFRYHLVQYEPWEGGPTRPFTWNVKVASLEVLRHPPT 1058          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1252.1584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW82_ECTSI1.950e-3736.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1S6_9PHAE2.660e-3637.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1009..1106
NoneNo IPR availableCOILSCoilCoilcoord: 775..956
NoneNo IPR availableCOILSCoilCoilcoord: 1111..1198
NoneNo IPR availableCOILSCoilCoilcoord: 962..1000
NoneNo IPR availablePANTHERPTHR13817TITINcoord: 202..963
NoneNo IPR availablePANTHERPTHR13817:SF73STRETCHIN-MLCK, ISOFORM Ucoord: 202..963

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1252contigH-paniculata_contig1252:558..10513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1252.1584.1mRNA_H-paniculata_contig1252.1584.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1252 104..10695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1252.1584.1 ID=prot_H-paniculata_contig1252.1584.1|Name=mRNA_H-paniculata_contig1252.1584.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2099bp
MARVTAEPKRAAGPRYHHVEVLPWEGGPDKPIKLKIKAGYLAKPPSPAAA
VTDATTGASAVAAPSPGLGNAMETTSGVRQGSPPDSCRSSADGSAVPVGG
TKRITVVGGADGISAEDGWPEEYGGTSRPTRRVVTRKASKAAQQAAGRRD
GSCSGVRDDTDNGRDGGDEEGAVERGCKESEVARGGHQAGRGKLATAGNG
RKKDGAVEADSGEDEMVVDEEERGEEGEEDGQEEQEGEDEEDEEEDEQDG
EAEHEETAMKAADGEVCFIPVGTRVVVIELPKWSEGQRGGPKPNGKVKVD
ELLGKTAIVKVSPTSWYSARYHKLAFVPWPGGPVDVEITWTLPRKYITVW
NPTFDYVSLVAGARESGVPAPQPPPPPPPAVAAAVAAAAAAIPPSPGTCV
AAAKLGYPVGTIVVVRTVDIDPGRSLKFARGEVREAGFHELLGREGKVIR
QPPANAKGVRYHMVEYQPWEDGPTRPFTWNVKMAALEVVRWPDTPSTPTS
TSFAVTSDNRLGEEEDGRVSASSTSASEGARTSKIAATGGKEESNEKSPG
SRTTATDAVTDRLPSAQTDESPANFTKAMLTARMDVDEAIIEALAPTASM
EGLSETGGGGGTRSRPPRTSLSGKETAEPGTADGQEGCSGSGDGGINGEE
VDPGEEERKASESEAQVQVQVQGESEHIASLTAPSSSPRAAADAKKVNAA
SRQEASDAAAAVRSVLSPEREEGVTATVAEFAEISQAGTEQEAVASDETA
EINVGNAAEPQAIAATQGATHAEKLEKMATAEAATEEEARSAEEEAERQA
AAAKTAEAAAEEEKARSAQEEAEKKAVAAKAEEEKARLAQEEAEKQATAA
KVEEEKARLAQEEAEKQATAAKVEEEKARCAQEEAEKKTAAAKAEEEKAR
SAQEEAEKQAAAAKAEEENARFAQEEAEKQAAVAKAEEEKARCAQEEAEK
QAAAAKAGEEKARCAQEEAEKKTAAAKAEEEKARSTQQEAQKQATAAKAE
ALAKAKSSFAQAAAEEEKARSAQEEAEKKAAAAKAEEEKARFAQEEAERQ
AAVAKAEEEKARCAQEEAEKKTAAAKAEEENARCAQEEAEKQAAAAKAEA
AAKAKSSVAQAAAEEEKARFAQEEAEKKAAAAKAEEEKARFAQEEAERQA
AAAKAEEEKARCAQEEAEKKAAAAKVEEEKARFAQEEAERQAAAAKAEAA
VKAKSAAEARETKIAKVAEAAAEEEKVRFAEEVDKSAKAAAEARSEEEEA
VAAGAAVAAGAETAATAARNEQDPPFEVVDGGDTEGDEENKRQLQAGEAR
GEEGEVQNAGSTTEPNTRETQTSIQEESWSFGLTLIFFCQLRKRKEGHHE
GTSSDDAATAQGGRVAAGHKRQRVDSRVSSFSSRGKHSSSGAGSGDAEDH
LTDSGEDDEQVARSKEANAENTVPGSSGSANCKQGDGQAGETTADLERDG
LVTGCTSGRELETETATNNATYNYNIEQRGGNKEEPVENDTEEHAGTSAA
TTNTSTTSVPIMSAVAAAETTSVASNAAETPQPTAASSSVAPTQVTVIRG
ASTTSDSTSEDPIAAAAASLPTMASQVQALMRTLVPVRVGSALGPEAVTG
AGEGSERESGSAATKTDIDGIWKMLEGLTQDMQSVKTQLKRGRSSTDADQ
DRRHVRGRRGSKGRATTPPPLSRRHHDHHVRGSDLSASGSEADSNDNNDR
DYDSRFGDDWSSSGEGSGRRGIGGGSGHRRSHRMSFTLSSAGALGPRYHG
PHYLGGGPNPFDAHMAAAVAADSRSGAWAYANPDPLIYARDRGHGDYETG
EGWDGHDSQRRRRRSGSEASHGGHPSSDDERGGLCKASLRGSPNTGGGGA
VASGDVWEDDGGHAALGLATEGKDEGAREGGRIVSRPDAVAAATASGPRS
GGGGGGGGGGDDGDGDSKRRSRGRKGAWDRDAARRGGSFEGAARRQSKQR
RHSEGARYLRGGGSGGSVVGSCHGGFSPGGFVYPALGGAYPEPPYYAGSP
AWTGGRGHAYHYPHPHLAPSPHEGWFSRKRHARSPLPQPFRDERERDAVE
AGSRRNRGSRDAGGDGSAGPRRGREYRQRSASRSRSASRSSDRREPST*
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