mRNA_H-paniculata_contig7760.15796.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7760.15796.1
Unique NamemRNA_H-paniculata_contig7760.15796.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: D7FRX7_ECTSI (Carbohydrate binding family 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX7_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 8.240e-135
Identity = 211/376 (56.12%), Postives = 252/376 (67.02%), Query Frame = 1
Query:    1 LALDLEDPSECSSLQVKDEHLIWSNRNLPETGGYREWAWTENTLVILEEGPHVITLCFIGKGLVNVDEILFQDSMCGDGLCSREQDNPETCSVCPXXXXXXXXPFGTLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEK-GLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAAGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGSR-ESSVDIEAAADGSFYVGYGVPG 1122
            L LDLEDPSEC  L   DE +I  N NLPET  Y +W WT+N  V L  GPHV+TLCFIG  +VNVD + F +S C +G+C +  D+ ETC  CP         +  L VPGD++AEDFD GGEGVG+HE ECV SET NCT     L S+YRNES K GLV LR+ DGTVSWGWTS  EWL YT+ VS TS+YNV LRYA+ +  +A +F+D  +C+        +G  +MP SGGE GPFSRT PF T+L AG HS+RVCV  GGFTLDKI+F   +   GVCN DG CDV   EGC SC DDC CS+G  YG V  +IP F+ A +FDEG NG AY+D +  NLG+ G R + SVDIEA  DGS +V YG PG
Sbjct:  289 LCLDLEDPSECPKLGEGDEQVIMLNSNLPETRSYSDWNWTKNASVALTPGPHVVTLCFIGNAVVNVDLLRFGESDCSNGVC-QWVDSEETCITCPQDCGECPTAYVPLRVPGDLEAEDFDIGGEGVGFHENECVSSETKNCTQVQGML-SEYRNESSKEGLVELRDADGTVSWGWTSIGEWLTYTVTVSVTSDYNVTLRYASASTGQAVIFLDTYTCDVKEGKGTFLGSLLMPDSGGEAGPFSRTAPFTTRLQAGQHSIRVCVATGGFTLDKISFD--LQTSGVCNDDGKCDVGDDEGCMSCEDDCVCSEGQWYGFVKTSIPGFVEAYKFDEGGNGVAYYDDTKGNLGLVGLRTDESVDIEAGWDGSLHVAYGTPG 660          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: A0A1Y0FYV6_9GAMM (Uncharacterized protein n=1 Tax=Cellvibrio sp. PSBB006 TaxID=1987723 RepID=A0A1Y0FYV6_9GAMM)

HSP 1 Score: 87.8 bits (216), Expect = 4.650e-15
Identity = 74/269 (27.51%), Postives = 106/269 (39.41%), Query Frame = 1
Query:  310 PFGTLV--VPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAAGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGSRESSVDIEAAADGSFYVGY 1110
            P+G +   +PG IQAEDFD GG+ V Y + +              +L   YR      +       G    GW    EWL YT+ V+++ NY + LR A+ + +  R+ VD              G   +P++G      + + P    LTAG H L++    G F +D + F+    DG                             +P+GG    IP  I    FD G  G AY D+   N G  G     VD E A+ G   VG+
Sbjct:  728 PYGGVARAIPGTIQAEDFDEGGQAVSYSDSDAE------------NLGGAYRPNEAVDIAA--NASGGHHVGWLGGSEWLEYTVEVANSGNYELELRVASESGSSLRIMVDGIDAT---------GQVPVPATGAWQSYTTISTPIT--LTAGQHILQLRAG-GAFNIDFMRFSNTGGDGQ----------------------------TPFGGTPWAIPGTIEMENFDNGGEGVAYHDADAANNGNAGRTNEGVDTENASGGGLNVGW 942          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: UPI00117DBE3E (carbohydrate-binding protein n=1 Tax=Catenovulum sediminis TaxID=1740262 RepID=UPI00117DBE3E)

HSP 1 Score: 86.7 bits (213), Expect = 8.420e-15
Identity = 82/275 (29.82%), Postives = 120/275 (43.64%), Query Frame = 1
Query:  310 PFGT--LVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAAGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGS--RESSVDIEAAADGSFYVGYGVPG 1122
            P+GT  + +PG I+AE FD GG+G+ YH++           A +T    ++RNE     +      G  + GW    EWL YT+ V +  NY +  + A+G    +  F    + N  T SE        P +G     ++ +   +  L AG+H +RV    GGF +D I+F  A+T+ G                           G+PY G    +P  I A  +D G  G AY D    N G TG   R   VDIE A+ G + +G+  PG
Sbjct:   33 PYGTNPIAIPGTIEAELFDLGGQGIAYHDLG----------AGNTG--GQFRNEDVDIEIAST---GGYNIGWFEPGEWLEYTVNVETAGNYAIHAKVASGMNGGSLRFEVYGATN--TNSE----TISFPGTGSWQN-WTSSPSTSLSLNAGTHIVRVVQNSGGFNVDSISF--ALTNSG---------------------------GTPYHGAPAQVPGVIEAEFYDIGGAGIAYNDL---NAGNTGGQLRNEDVDIELASTGGYNIGWFEPG 253          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: A0A2I8VKY3_9EURY (Uncharacterized protein n=1 Tax=Salinigranum rubrum TaxID=755307 RepID=A0A2I8VKY3_9EURY)

HSP 1 Score: 82.4 bits (202), Expect = 1.600e-13
Identity = 75/261 (28.74%), Postives = 109/261 (41.76%), Query Frame = 1
Query:  340 IQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREV--DGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAA-GNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPEN-LGITGSRESSVDIEAAADGSFYVGY 1110
            I+AE +D GGEGV YH+              D++    YR+    G V +     D   + GW    EWL YTI + + S Y+   R A+ G   K R+ +D            E+GV  +P +GG     + T+P     T G H LRV  +  GF L+ + F   V +           V  G+              +PYGG A  IP  I A  FDEG    A+ D+   N LG   +    +++   A G + +G+
Sbjct:  142 IEAEQYDEGGEGVAYHDTT------------DSNQGGAYRD----GGVDIERTADDNGYNVGWIKDGEWLEYTITLPAGS-YDFEARVASWGTDRKLRVLLDGS----------ELGVVDVPETGGSQNWQTVTLPNLEVSTDGEHVLRVEAVGSGFNLNWVRFVTRVPE-----------VEPGQ--------------TPYGGAARAIPGRIQAEDFDEGGQDVAFSDTDDVNRLGEYRAAGPDIELSGEASGDYSIGW 350          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: A0A7M2X2X7_9BACT (Carbohydrate-binding protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2X2X7_9BACT)

HSP 1 Score: 82.8 bits (203), Expect = 2.070e-13
Identity = 82/268 (30.60%), Postives = 119/268 (44.40%), Query Frame = 1
Query:  310 PFG--TLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYA-AGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVC--VLIGGF--TLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGS-RESSVDIEAAAD 1089
            PFG     VPG I+AE+FD+GGEGV +H+ +             T++   YR+     +    +  G  + G  S  EWL YT+ +++   Y++ +R+A AG    A L VD  +           G  V+P++GG     +   P  T L+AG H LR       GG    L+ ++ T+A T            V         G        +P+GG    +P  I    FDEG  G +Y DS P N+G  GS R + VDIE + D
Sbjct:  336 PFGGTAWAVPGTIEAENFDDGGEGVAFHDTD------------PTNVSGSYRSTGVD-VESASDTGGGFNIGHISAGEWLEYTVNIAAAGQYDLGVRFATAGGGGTAHLEVDGLAAG---------GAIVLPNTGGWQTWQTVAGPRLT-LSAGQHVLRFAFDASAGGDIGNLNWLSLTDAPT------------VPXXXXXXXIGQ-------TPFGGTPWALPGTIQFENFDEGGAGISYQDSDPTNVG--GSYRSTGVDIEPSGD 559          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: UPI001B810FB2 (carbohydrate-binding protein n=1 Tax=Actinospica durhamensis TaxID=1508375 RepID=UPI001B810FB2)

HSP 1 Score: 82.4 bits (202), Expect = 2.700e-13
Identity = 92/341 (26.98%), Postives = 136/341 (39.88%), Query Frame = 1
Query:   73 NRNLPETGGYREWAWTENTLVILEEGPHVITLCFIGKGLVNVDEILFQDSMCGDGLCSREQDNPETCSVCPXXXXXXXXPFG--TLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAAGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGSRESSVDIEAAAD 1089
            N N+P TGG++ W  T +  V L  G   +T+     G  N++ + F  S                             P+G     VPG +QAE++D GG+G  Y           N T+ + S  S YR++    L    +  G    GWT+  +W  YT+ V++   Y V +R AA +     L +   S    +      G    P++GG       TV     L AG+ +L         T+D+        DG   N + +   AAG          T S+G PYGG A  +P  + A  +D G  G AY  +S  N      R   VD+EA++D
Sbjct:  159 NINVPATGGWQTWT-TVSATVTLPAGTQTLTIDQDAAGW-NLNYLTFTSS---------------------------EGPYGGTAAAVPGTVQAENYDTGGQGTAY-----------NVTSTNGSANS-YRSDGVD-LEATSDTGGGDDLGWTTAGQWFNYTVNVATAGTYTVGVRIAAPSAVADALHIANSSGTNLS------GAIAAPATGGY--QTWATVNATVTLPAGTQTL---------TVDQ--------DGAGWNLNYLTLAAAGG---------TPSEG-PYGGTAAAVPGTVLAENYDTGGQGVAYSVTST-NGSANSYRSDGVDLEASSD 421          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: A0A7J4IJJ8_9EURY (Probable pectate lyase C n=1 Tax=Methanoregulaceae archaeon TaxID=2485498 RepID=A0A7J4IJJ8_9EURY)

HSP 1 Score: 82.0 bits (201), Expect = 3.390e-13
Identity = 72/244 (29.51%), Postives = 96/244 (39.34%), Query Frame = 1
Query:  310 PFGTLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAAGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLG 1041
            P+ TLVVPG I+AED+DNGGEGV YH+                +    YRN+     V +  + G  +  +    EW  YT  V    +Y V LR AA N  +    +   +         EIG   +P +G      + T     +L AG+ +LR      G  LD+I  T  VT            V                  +PY   A  +P  I A  FD G  G +Y D  P NLG
Sbjct:  488 PYRTLVVPGTIEAEDYDNGGEGVAYHDTVAG------------NQGGAYRNDD----VDIEAITGGYTLAYIRDTEWTQYTATVQQAGDYQVTLRAAAWNGPRTVRILAGTT---------EIGTVTVPLTGSSTAFTTATT--TVRLAAGAQALRFAYTGDGMNLDRIE-TALVTPTXXXXXXXXXXVV---------------PEAPYP-AAHVLPARIEAEHFDVGGEGVSYHDFEPANLG 687          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: UPI00189242BB (carbohydrate-binding protein n=1 Tax=Catenulispora rubra TaxID=280293 RepID=UPI00189242BB)

HSP 1 Score: 81.6 bits (200), Expect = 4.530e-13
Identity = 76/275 (27.64%), Postives = 109/275 (39.64%), Query Frame = 1
Query:  310 PFG--TLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAAGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGSRESSVDIEAAAD--GSFYVGYGVPG 1122
            PFG     VPG +QAE++D GG+GV Y+             A      + YR +    L    +  G    GWT+  +W  YT+  +S   Y V+LR A+ N     L + A++           G   +P++GG       TV  +  L AG  +L V    GG+ L+  +F                  A+GEG              PYGG    +P  + A  +D G  G AY   +  N      R   VD+EA  D  G + VG+   G
Sbjct:   55 PFGGTAAAVPGTVQAENYDTGGQGVAYN------------IASTNGSANSYRTDGVD-LEATTDTGGGYDVGWTAAGQWFDYTVKAASAGTYTVSLRLASPNGVTGGLHI-ANAAGTNLS-----GAVNVPATGG--WQTWTTVTTSVTLPAGQQTLTVYQDNGGWNLNSFSFAG---------------TASGEG--------------PYGGTPAALPGTLQAENYDTGGQGVAY-SVAGTNGSANSYRTDGVDLEATTDTGGGYDVGWTASG 278          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: UPI001B827E6A (carbohydrate-binding protein n=1 Tax=Actinospica durhamensis TaxID=1508375 RepID=UPI001B827E6A)

HSP 1 Score: 80.9 bits (198), Expect = 6.830e-13
Identity = 83/275 (30.18%), Postives = 117/275 (42.55%), Query Frame = 1
Query:  310 PFG--TLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAAGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGSRESSVDIEAAAD--GSFYVGYGVPG 1122
            P+G     VPG +QAE++D GG+GV Y+      S TN          + YR++    L    +  G    GWTS  +W  YT+ V+S   Y V LR AA +     L + A+S    T     I V   P++G        TV     L AG+ +L +     G+ L+ ++FT +   GG           +GEG              PYGG A  +P  + A  +D G  G AY  +S      T  R   VD+EA  D  G + VG+   G
Sbjct:   49 PYGGTAAAVPGTVQAENYDTGGQGVAYNV-----SSTNGTA-------NSYRSDGVD-LEATTDSGGGDDLGWTSAGQWFKYTVNVASAGKYTVGLRVAAISAVTDGLHI-ANSAG--TNLSGNINV---PATGA--WQTWTTVTATVTLPAGTQTLTIDQDTAGWNLNYLSFTSS---GGT----------SGEG--------------PYGGTAAAVPGTVQAENYDTGGQGTAYNVTSTNGSANT-YRSDGVDLEATTDSGGGYDVGWTAAG 274          
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Match: UPI00131EBE81 (carbohydrate-binding protein n=1 Tax=Granulicella sp. L46 TaxID=1641865 RepID=UPI00131EBE81)

HSP 1 Score: 80.5 bits (197), Expect = 1.090e-12
Identity = 82/275 (29.82%), Postives = 115/275 (41.82%), Query Frame = 1
Query:  310 PFGTLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYSKYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYAA-GNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQLTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRSCGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITGSRES-SVDIEAAAD--GSFYVGYGVPG 1122
            P G   +PG IQAE+FDNGG  VGY  ++            D      YR  +  G+ G  +  G    G+T   E+L YT+ VS+   YN+  R A+ G      +  D          E++ G   +P + G    ++  V  A QL+AG H ++V       TLD    T     GG+ N +     A              +  S + G    IP  I    FD G  G AYW+ +  N G    R   +VDIE ++D  G + VG G PG
Sbjct:  614 PAGPAAIPGIIQAENFDNGGNYVGYFNLDST----------DQGSAPTYRPGTTVGIEGTGDAGGGYDVGYTKEGEYLRYTVNVSTPGIYNLQTRVASLGQGGYYHVSFD---------DENKTGTLFVPVTNG-FQTYTTQVSPAFQLSAGRHVMQV-------TLDGNGPT-----GGMGNFNWFGLQAP-------------TPSSSFTGGPQAIPGQIEIENFDTGGKGVAYWNGAMANGGGANYRPGETVDIENSSDTGGGYDVGNGQPG 843          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7760.15796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRX7_ECTSI8.240e-13556.12Carbohydrate binding family 6 n=1 Tax=Ectocarpus s... [more]
A0A1Y0FYV6_9GAMM4.650e-1527.51Uncharacterized protein n=1 Tax=Cellvibrio sp. PSB... [more]
UPI00117DBE3E8.420e-1529.82carbohydrate-binding protein n=1 Tax=Catenovulum s... [more]
A0A2I8VKY3_9EURY1.600e-1328.74Uncharacterized protein n=1 Tax=Salinigranum rubru... [more]
A0A7M2X2X7_9BACT2.070e-1330.60Carbohydrate-binding protein n=1 Tax=Phycisphaeral... [more]
UPI001B810FB22.700e-1326.98carbohydrate-binding protein n=1 Tax=Actinospica d... [more]
A0A7J4IJJ8_9EURY3.390e-1329.51Probable pectate lyase C n=1 Tax=Methanoregulaceae... [more]
UPI00189242BB4.530e-1327.64carbohydrate-binding protein n=1 Tax=Catenulispora... [more]
UPI001B827E6A6.830e-1330.18carbohydrate-binding protein n=1 Tax=Actinospica d... [more]
UPI00131EBE811.090e-1229.82carbohydrate-binding protein n=1 Tax=Granulicella ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7760contigH-paniculata_contig7760:426..9183 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score85.5
Seed ortholog evalue5.8e-14
Seed eggNOG ortholog324057.Pjdr2_2840
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Domain of Unknown Function (DUF1080)
EggNOG OGs1U01U@1239,271AE@186822,4I9BJ@91061,COG2335@1,COG2335@2,COG3507@1,COG3507@2
COG Functional cat.G
Best tax levelPaenibacillaceae
Best eggNOG OGNA|NA|NA
Exons9
Model size1122
Cds size1122
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930964.8975508-CDS-H-paniculata_contig7760:425..5451622930964.8975508-CDS-H-paniculata_contig7760:425..545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 426..545 -
1691481530.190832-CDS-H-paniculata_contig7760:425..5451691481530.190832-CDS-H-paniculata_contig7760:425..545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 426..545 -
1622930964.9140058-CDS-H-paniculata_contig7760:1653..17891622930964.9140058-CDS-H-paniculata_contig7760:1653..1789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 1654..1789 -
1691481530.2014837-CDS-H-paniculata_contig7760:1653..17891691481530.2014837-CDS-H-paniculata_contig7760:1653..1789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 1654..1789 -
1622930964.9335344-CDS-H-paniculata_contig7760:2300..24221622930964.9335344-CDS-H-paniculata_contig7760:2300..2422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 2301..2422 -
1691481530.2126093-CDS-H-paniculata_contig7760:2300..24221691481530.2126093-CDS-H-paniculata_contig7760:2300..2422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 2301..2422 -
1622930964.953228-CDS-H-paniculata_contig7760:3528..37141622930964.953228-CDS-H-paniculata_contig7760:3528..3714Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 3529..3714 -
1691481530.2241747-CDS-H-paniculata_contig7760:3528..37141691481530.2241747-CDS-H-paniculata_contig7760:3528..3714Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 3529..3714 -
1622930964.9713933-CDS-H-paniculata_contig7760:4350..45361622930964.9713933-CDS-H-paniculata_contig7760:4350..4536Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 4351..4536 -
1691481530.2393315-CDS-H-paniculata_contig7760:4350..45361691481530.2393315-CDS-H-paniculata_contig7760:4350..4536Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 4351..4536 -
1622930964.989877-CDS-H-paniculata_contig7760:5869..59531622930964.989877-CDS-H-paniculata_contig7760:5869..5953Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 5870..5953 -
1691481530.2505417-CDS-H-paniculata_contig7760:5869..59531691481530.2505417-CDS-H-paniculata_contig7760:5869..5953Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 5870..5953 -
1622930965.008575-CDS-H-paniculata_contig7760:7623..77221622930965.008575-CDS-H-paniculata_contig7760:7623..7722Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 7624..7722 -
1691481530.2672584-CDS-H-paniculata_contig7760:7623..77221691481530.2672584-CDS-H-paniculata_contig7760:7623..7722Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 7624..7722 -
1622930965.019754-CDS-H-paniculata_contig7760:8082..82111622930965.019754-CDS-H-paniculata_contig7760:8082..8211Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 8083..8211 -
1691481530.2763195-CDS-H-paniculata_contig7760:8082..82111691481530.2763195-CDS-H-paniculata_contig7760:8082..8211Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 8083..8211 -
1622930965.03266-CDS-H-paniculata_contig7760:9123..91831622930965.03266-CDS-H-paniculata_contig7760:9123..9183Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 9124..9183 -
1691481530.2848082-CDS-H-paniculata_contig7760:9123..91831691481530.2848082-CDS-H-paniculata_contig7760:9123..9183Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7760 9124..9183 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7760.15796.1prot_H-paniculata_contig7760.15796.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7760 426..9183 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7760.15796.1

>prot_H-paniculata_contig7760.15796.1 ID=prot_H-paniculata_contig7760.15796.1|Name=mRNA_H-paniculata_contig7760.15796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=374bp
LALDLEDPSECSSLQVKDEHLIWSNRNLPETGGYREWAWTENTLVILEEG
PHVITLCFIGKGLVNVDEILFQDSMCGDGLCSREQDNPETCSVCPQDCGV
CPTPFGTLVVPGDIQAEDFDNGGEGVGYHEIECVPSETNNCTAKDTSLYS
KYRNESEKGLVGLREVDGTVSWGWTSHKEWLGYTIVVSSTSNYNVALRYA
AGNVAKARLFVDADSCNPYTQSEHEIGVAVMPSSGGEIGPFSRTVPFATQ
LTAGSHSLRVCVLIGGFTLDKIAFTEAVTDGGVCNKDGMCDVAAGEGCRS
CGDDCTCSKGSPYGGVAPTIPRFIWAVRFDEGNNGEAYWDSSPENLGITG
SRESSVDIEAAADGSFYVGYGVPG
back to top

mRNA from alignment at H-paniculata_contig7760:426..9183-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7760.15796.1 ID=mRNA_H-paniculata_contig7760.15796.1|Name=mRNA_H-paniculata_contig7760.15796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8758bp|location=Sequence derived from alignment at H-paniculata_contig7760:426..9183- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCGCTTTGGACCTGGAGGACCCTAGCGAGTGCTCTAGCCTGCAAGTCAA GGATGAACATGTGAGGTCGGGCGTTCGATTTGGGTTAGAGTTAGGGTAAG GAAGGGGTAGGCCAGCGAATGTTTCAATCTGGAGGTCATGGGTTGAGAAA GTGAGAACCGCAAAAAATATTAATGCCGCGTATGAAATCCTTAATAAAGT ATCGTTGTTGTTACTTCGAAGGTTAGGAATACAAGTTGATTTGAGTTTTA TCAGATAATAAGATGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGGGC GGGCGGATATATGTGTGGGTGCGTGGGTGGGTGAGGGTGTGTGTGGGAGG GAATACGGTAGCTGGATACACGAGAGCAGGAGTACCAGGTTGAAGCTATT TTTTCGGGCACCTTTTTCTCTACATATTACGGTGAACAATTTTTCCGAGA CGAGATCAGGTATATTTTTCACCAATATGACTGCACGCACCACAGAGTGT GCAGAGTGATGTTGTGATCTTGACTTTGAAAAATGTTTTCACTTGTGAAA ATATCTTGGGGGCTTTGTGCATATCATATATAGAGCTCTACAGGACCAAC TACTGGAGCAAGATTACGCTAGATTCTCGAAAGCAACTCAGAACGTACAC CTCTTACTATGAGCAGGGTTCAGCTTTTGACAGTCCCGGCACAACACTCT TTATCACAGTGTGAAGCAGAACACTTCGTTGTCCTACTACGTTTGGGGAT GATTTAGTAAAGATCCTGCACTGCCACTTAACAGAATGATGGCGACTCTG TGTCCATCGTTACCCACAATAAACTATCATGAAAAAAAAATCGTACCTTA ATCGAACCAAACAAAAGTAAACCCAACCCAACCCAACCCAACCTAAACCA ACTCAACCCAGTTCGAACCGAACTGAACCAAACCGAACTGAACCAAACCG AACCAAACAATACTATAAACAGCTGATCTGGAGCAACAGAAACTTGCCGG AGACCGGCGGGTACCGAGAGTGGGCATGGACTGAAAATACTCTCGTCATA TTGGAGGAAGGACCCCACGTCATTACGCTCTGCTTCATCGGGAAAGGCTT GGTGAGCTGAACATCGACTCTAGTAGAAACGTAGGGCGTGGTGTGCTGGT GGGTTTTCAGGGAAGTTGTTTGCCAATTCGAAAATCCTACTCAATTAGCT ACTTATAGGCAAACATTATAGGGATAGCACCGTTTTGCACCTTCACACAC TGACGCCTCAATATACCCTTGACCAGATACGAAGAAGGTGCTCGAAAATA AAACAGCCGCATGTTATGGAGCAGCACAATTTGCTCTTAAAACTGTAACC TACTCTAAAAACGTTACGGCTAAAGAGTTCACTGCACTCCAGAAGTTGAC CGTAATCAGCCATCGGTCATGACCCGCTGCCTGCTTGTTTGCGTTTTCTC CAAAACAACAGGTGAACGTCGATGAAATTCTATTCCAGGATTCCATGTGC GGCGACGGTCTGTGCAGCCGGGAACAGGATAACCCAGAGACCTGCAGCGT TTGCCCTCAGGTATATACTTACATCTATCCCGTTCTTCTCCCTCACAGCT TTTTTGTTAACTTATTTTTGGTCGTTTCGTTCTAGCTCCACACACACATC CACACATTTATTGGTCCCATCACTCCGACCCGCGGTCAGAGGCTCCCAGG TAAAAATAGCAATGATGCATACGATGTCGATTGGCCTATAGCCCGATATG TTTTCCAATCCTGGCTTTCGATACACCTATTCTTACGCTTGGATAAGAAC GGATAGCACCTGCGCGAAAATGGCCACCCTTGTCATCGGAAAACGCTAAA CCATGTAAAAACTAAAAACTACATGGAGTACCAGGCACCGCTCCTCTATG CATCAGATACCATCGCGAGATCTGTCGTCAGGGCTAGCCGATTTCACGTC AAACCTTCATACTAGTGACGTCAATCGTGGAAACACTTAATTATTCCACT AGGCTTCGGCGCATGTATTATTTGAAGCTTCTCTAATAATAGTGGCACTT GAAGGCGAATCTGCCGGAGACTCTAACTTTTGGAGAAAAAAATAACGTCT AAAATTGATCCTGATCACCAGTTTTACGTCGGTATTACAACGTAAGCCCT GCACGTTTCCCTTAGCGTTCTTCTAACACACATCATCATCATCATCATTT TCATTTTCTTCATCATCGTCATCATCAAAATCACTCAGACCAGCGGTCAC CAAAAGGGAGCTGAAGTAGTCTGTCTACTTCACCGTGTGACACATATGTG CATAGACAATAAAAAAACACCTAAAAAGTCAGACATAAACAAGTATAGCG ATGTTTGGGTCTGAACACATCAGTATCAGAGGGTGAGACTTCGAGGGTCG GACTTTTTTTTATCAGGAAACAATCCTCTCTAGGGAGCAAAGTGGCAACT TACCGTGAGAGGATTTGCTACCAACAAGACGAGGGTATTGGAAAAAGTGC AATACGCAATCGACCATGACCGATATGATCGAGTATTTCGGGTAGATTAT GGTCCGAGACTAGCGCATATCGCTTTGTTCTTATCTGATATGGGATATAA TATGATGTCCTCAGACGGCAGTGGAATATAATTGCCACTGAACACCATCA ATTACGACCAAAATGGAGGCAAGGGTGAAAACATATTAGTTGAATGTGAT TATTCATGTATCCGACAGTTACCATGCATTAGCCTAGATGAGTACATTTT TGTTTGGTGGCGTTCATCATCAACTTGGTATTGCATTTTTCATTGAAGAG ATGATATCAACATACATCAGGCATGGTGTGCCTGCCTACCGTGCTTTTCC GATGACTTATAAATTCATCATATGAATGATGATAATACTTGACTACTTGC CTGTTAACTTTTCGCTTTTGGTTACATCAGACGCTTGTTGTATCTGTTTC ATGTACAGCCGTGGCACACACGTGAAGTACGCTGGTTTTGGTTTCGTATT TTCCGCGCCTACCTCGCCTGATTTGACCTGTTATTTAAGCGAAATGATTC CATCGGAGTTACGTATCTACTAGTTGGTAGGCCACGGCTACTACAGTGTC AACCACTTTGTTACGGTACCTGCAAGCCACGCACGCGTCGCTGACCCCCG CATGTGGGCAGAATTAACGTTCATTATTCGTTTTATACACACAGACTCGT ATGTATCTCTGCTTTGAATTACTTTCCCAGGATTGCGGCGTCTGCCCTAC CCCTTTCGGGACGTTGGTGGTTCCGGGAGATATTCAAGCAGAAGACTTCG ACAACGGAGGAGAGGTGAAGACACATATTGTTTTGGGTTTTCCATCATCA GAAAAGATTGTCGCTTTGTCAAATCCCGCTGGTAACGAAGTCGTGAAACA CATATTTCTCTCGAACACACCATTTTTTCAACATGAAAAAATGCACAACA CCGGTACGTAAGAAACAAGAAAAAATGTGCACGGCTCGCGCGTGGTGCCT TGTTGCTATATTGCTGTACATGACGCTATTACCCAATACTACTTTCTGTG TCATCACCTACATTATATGTATGTTATCACCCAAAGCTCGGCTTGCGTTC TGTGTTGTCACCCTTGGGTTGCTGTAAGCGGCAGATCAATCACAAATTGA CTGTAACCCCAATCAAACATGATGCGTATTAATACTCCCTATCCCGTTTA GTGCCTAGAAAAACATTCCGATGTATGTAGTAAATCACCAAATCAAACTC CGCATGGGTGAAAAGCACCGAAATGTCTGCCGTTGGAGTTGCAAACTGTA TAGAAGTACAGTTATCTGGTTGGGCCTTGTAGGAAACCTTCTTGGTTTGT CTCCTCCTCGTTGATTCTTTCATGTGCACGAATCGCTCATTTCTAGCCCG CACATCGTCGGAAGGCGAAGTTATATCCATAGCTCGCCTTTTTGTGCCAT CATCCAGAACACCACTCACGGCTGTTACATGCCTAGGAGGCGGTAACGGG GATAGTCGTTGAATATTATCGTTCTCTCAGACCCGAACGATTGGAATTTC GAATTGTGACGCTTATGCTTTTGCTGTGTTGGTCTATACGTGGAACGTTT CTATCGCTGACGATCTACCGTATAACCCGGAAGTATCGCATTGAGGTGCG ATACTTTTCAAACGTGATTTCTTGAGAACTAGAATGCAACTGACAACGAG TAGTGTGCCGTTGAAAAGATTTTGGCGGGATCTATTTGTCGATTGACGTT TTTTTTCTACCGCGTGATGCCTCCCTGTTCCAGATGGTCGCCTTGAAAAA ATGTTCGCACCCCGGTGCGATGCCCCCGATACCGCCGGGTTTTATGGTAC CTGCCTTTCGTGTACAAACCGAACCCCCATCTACAATTACCTAATTTTCC GAATATTTGCGTAAGACGTGGACTCTTTTTATTTTAAACGTTCGACGCAT TTAAACCTAATGCTCGCTTTTCATGTCCTTCTTTTACCGAAACATCTATT CGCTCCTGTAGTATACTTGACGGTTGGCTTGCAATTGATAATATTTCCAT CAGATCACGTAAACCAAAGAGAAAATTGTTAAACAGAACAATAAATGCCC ATGCACGTCTGAATGTTTTTCTTATGTGCCCGTCGTCTGATAAACAGGGT GTTGGGTATCACGAGATCGAGTGTGTGCCGAGCGAGACCAACAATTGCAC CGCTAAGGACACTTCGCTGTACAGCAAATACCGCAACGAGTCTGAGAAGG GACTGGTGGGGCTAAGGGAGGTCGATGGCACGGTGTCTTGGGGGTGGACC AGCCACAAAGAATGGCTAGGCTACACCATCGTAGTGAGTTATTTTTCGTG TCGTTTGACGCATAACACACGTACGGGTAGAGGTTTTGCCACAAACGTGA AATGTAGCTCTCCCGCGCGTGCACTTCGTTTCGTGTCCTCGGCCAACGTG TGACGGTTCGCTGCTCGTTCGCTGAGGCTCGCGACGCTCGCAAAGAGCTA CAGCGGATACAAAACAATGTGCACAGCAATAACATTGCTTTTTCATGTGT TGCGTGACAGTTAAAGCGATCCGTTATTCCGGGGAGCTTATCACCACCAT CATAGAGGTGTACATGATGCGGGGACTGGCTGCCGTCTGACAGTGTGCAC GATCTGATAATACTTTTGGAGCCGGCTAATAATTAATGGTATATATAAAT GGAAAGCTAAGTAAGGGCTGGAGCCCTTGTTTGTGCGACTGTGGACTGGA CCTCGCTGTCACATTCGGGTCTACGTGCATGCATGAATTGCTGAATGATA CAGCTGCTTGTAGTTTCAGAGCACTAGCGTTCAACGTTGCAAACGCACAA GCTGGCACTTCAGCCCCAAACCGAATCCTAAAAGCCGAATACTGAACCTG ATGACCGTTAACGTATTACTAAACTATTTCTTACTAAAAAAATCAAACTG TGCCCCCAACCCACTTCAGGTATCCTCGACCTCGAACTACAACGTCGCGC TAAGATACGCCGCCGGCAATGTCGCAAAGGCACGCCTATTTGTGGACGCG GACTCCTGCAACCCTTACACGCAATCGGAACACGAGATCGGAGTAGCCGT CATGCCGAGCAGCGGAGGGGAAATCGGGCCGTTCTCGAGAACGGTCCCTT TCGCGGTAAGTTGACATCATTTCTCAGGTGTTGTCGAACGAGTCCGACAA ACGTCATAACTTAGATTTAGGGGAGGAGGCGTTTTTCCCCTGCCCCGCCA AAACGGTACGTCGAAAATGCCGGAATTCGGCAAGAACCAACTTGGCGGTA CACTGAGTGATTCCTTGTCAGTGCACGCATCCCGTCGCACATACTTGACG GAATATACCGCTGGGGACTACAATTACGACAAGGTCAATCCCAACTTATT TCGAGAAATAACATACAGTTCTTTGGAATCTTGCAGCAAAGTTGTCATAT TGAATAAGATGTAAAAATCTAGCTTCGCAGTGTTACTTCCAGGCTGGGTC TTTATCCAAATATGACACAAGCCGCTCGCGCTTCACCTGATTTAACCTTG CATGTCTTCTTGCAGACATAGGACTGTACGGCACAACTAATTGCGTTATC AGCCATAACAACATGGTCGTACAGTAGGAGACATCTACCAACACTGCAGC ATATACAGTCATTCACAACGCGTTCCATACAGCACCTTGATGTGCTGCAT ACAAGTCCCACCCGTCGTTCGTAGCGTCGACAGTGGCATTAGGTGGCAAA CCTAAGAGGCTCAAGCTCAAACGTATCCTAAACTTTTATCAAGTTGACTG CTCGTTTAGTACCCCAACAACTGATTATTACAGTTGCTTTTTATAAAAAT CATAACCACTTACGACAGTGAAAGACGCGTGTATCAAAATCTTTGCATCA GTATTAGACTTTATCTCTGGCTTGTCCGGACATTGCTGATAGAGCTTCGC CTCTCACTTCTAATGTATACACATGTGAATGCATCTAAAATAACTGGCTG ATTGTTATGTTAGTCAACGCTGCCTTGCACGCCCTCTCCTCCCGCCTCCT TGGACGGTACATACTGCTTTGAAAGCACAGTTGCGTGGCCTCGCCGTGAC ACATGACCATGTCAAGCTAGACGTACTTCAAATATACACAGAGAAGTCTT GCAGAACTTAACAATGAGGTGTGCCTTCAGCTTTTTTTCGATAGGAAATG GCTGACATATGCCTCTCCCCCCCCCCGCGCGCGCGAATCCGTTCATCGGA TACAACACCAGACACAGCTGACGGCGGGATCGCATTCTCTTCGCGTGTGT GTGCTCATTGGCGGATTCACGTTGGATAAAATCGCGTTCACAGAGGCGGT AACAGACGGCGGCGTATGCAACAAAGACGGAATGTGAGAGAAACCGAATG AAAAAGGCAAAGTTTTGAAAGCGCTAGTACATCTGTTAATCATCCCACTG TTTGTATTCGGGTGTTAGAGGGGACCGTTTTGCTCGGGGTTGCCAAGTAC TACAACACGTGAAGGAAGGAGCTCCCGCCATATAGTCGTACGGGTGCGAG AAAAAAACAAAAAGAAGAAATAATAGCAGCTTATTCTGAGTTTGCAGTTT GCAGGGAAGACCCCTCGGTAATACTAGATTTGAGGGTGATATTACGTCTT CCATCGTAACCCAAAACATTTCAAATTTGACGAGTTAGAGGGAGACACCT TCACAACAGTCACAGCAGTCGTTTCAAGGGTTGTTTAAGCACTCAGCTGC GCTTCGTTCGTGCTGGAGACCTAGTCTAATAACTCTTGCAGCATTCCGAG CTAAACTTGTGTATTGGTCATTGTCCAGTCCTTCGAATCTTCCTCACTTG CACTAACTGGATTTTATTACCTGCTATGCGTTTGTTATTTCCAGGTGCGA TGTGGCTGCCGGGGAGGGCTGCAGGTCTTGCGGAGACGACTGCACATGCT CCAAAGGTTCTCCGTATGGCGGGGTGGCCCCCACTATTCCTAGGTTCATC TGGGCTGTGCGATTCGACGAAGGCAACAACGTGAGTGTGTGTATATCCTC GTTAAATAATATGCTGATGATCATGACGTTCCTCTCGGAGCGATTCCTTT CTCGTTCCAACTGATTTTCAAATTCTCACATAACACGAAAACATTACGAG GGGATGTCTGAGTTGAGTGCGCCACTGGCGTACCATAGTTGTGGCGTGCC TACTAAGTGCACAGTCAGGTATGTATTCCTCCCTGGGTTTAAGGAGATAC GTAATAATTGATCAGTTTCGTTAATGTTGAACTTGGCGATTGCGCCTTCA AGGTAGGGGTATGTTGGGGGATAAGATTAACTTTTTTTTTTTACGATAAG TACTTGTCATTCGACCTGTTCTCCTGCTACACTTTACGCCGTTTCATGGG GTTAGCGCACGTACTAGCGCGTGAGGACTTACACTGTTCAACGCTCCACG GCATCCAGACTTTAGAGCTGGTTTATCTTGTAGCTGGAATACTGCTGTGA GTGCTCCCTCGTGCCCAGCACCTTGTCGTCCGTGTTAGTAGTCTTGCTAT AGATACCCCAGATATGTGTAGCTTTGAGGGGGGTGTCACCGTTCATAGCA CTATCGTTCTTAAGTCAACAATGACCCACAGGACTTGCTTGATTCTTCGC CCGAAAATGATCGTTTCGACGGGAGCTTTACCGGAAAAAAACACAAGGTG GGCCTGCTTGGCACGCAAATTCTATGTTTCCGAATCATAATCCTCTATTT TCCGGGGGTGATGTCTACAGCTGGTTCCCGCCCGTGAACATGGCATGGCG AGATACAACTGTCAAGAGCCTCGACAATACAACAACAATCAGATTTACTA CATTAAACGTGCGGTGTGTACGGTGTGTTCTGTTCGACATATACGGCTCT TGTGTGCGTGTACCCTATCCTCTATCGTACAGTTTTCTCTTGTGTGGTGG CATTCCGTACGCGAACCGACGCAGATGTTGATTTTCGATGGGTTGAAAAA ATTGATAGTGTGTCCTACCTGATAGATTTCGCGACGGCACTCCAGCCTTA GACACAGTGGCGCCAGAAGCAACCCCACTACTGTAGGGCAAACACTGAAT TCAATCTTCGTCCATCTCCGCCTGCAAATACACGATAGGGTGAGGCGTAC TGGGACAGCAGCCCCGAAAATCTGGGCATTACGGGGTCCCGCGAGAGCTC GGTGGACATCGAGGCCGCGGCTGATGGGTCGTTCTACGTTGGTTATGGTG TGCCAGGT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig7760:426..9183-

>mRNA_H-paniculata_contig7760.15796.1 ID=mRNA_H-paniculata_contig7760.15796.1|Name=mRNA_H-paniculata_contig7760.15796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2244bp|location=Sequence derived from alignment at H-paniculata_contig7760:426..9183- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCGCTTTGGACCTGGAGGACCCTAGCGAGTGCTCTAGCCTGCAAGTCAA
GGATGAACATCTCGCTTTGGACCTGGAGGACCCTAGCGAGTGCTCTAGCC
TGCAAGTCAAGGATGAACATCTGATCTGGAGCAACAGAAACTTGCCGGAG
ACCGGCGGGTACCGAGAGTGGGCATGGACTGAAAATACTCTCGTCATATT
GGAGGAAGGACCCCACGTCATTACGCTCTGCTTCATCGGGAAAGGCTTGC
TGATCTGGAGCAACAGAAACTTGCCGGAGACCGGCGGGTACCGAGAGTGG
GCATGGACTGAAAATACTCTCGTCATATTGGAGGAAGGACCCCACGTCAT
TACGCTCTGCTTCATCGGGAAAGGCTTGGTGAACGTCGATGAAATTCTAT
TCCAGGATTCCATGTGCGGCGACGGTCTGTGCAGCCGGGAACAGGATAAC
CCAGAGACCTGCAGCGTTTGCCCTCAGGTGAACGTCGATGAAATTCTATT
CCAGGATTCCATGTGCGGCGACGGTCTGTGCAGCCGGGAACAGGATAACC
CAGAGACCTGCAGCGTTTGCCCTCAGGATTGCGGCGTCTGCCCTACCCCT
TTCGGGACGTTGGTGGTTCCGGGAGATATTCAAGCAGAAGACTTCGACAA
CGGAGGAGAGGATTGCGGCGTCTGCCCTACCCCTTTCGGGACGTTGGTGG
TTCCGGGAGATATTCAAGCAGAAGACTTCGACAACGGAGGAGAGGGTGTT
GGGTATCACGAGATCGAGTGTGTGCCGAGCGAGACCAACAATTGCACCGC
TAAGGACACTTCGCTGTACAGCAAATACCGCAACGAGTCTGAGAAGGGAC
TGGTGGGGCTAAGGGAGGTCGATGGCACGGTGTCTTGGGGGTGGACCAGC
CACAAAGAATGGCTAGGCTACACCATCGTAGGTGTTGGGTATCACGAGAT
CGAGTGTGTGCCGAGCGAGACCAACAATTGCACCGCTAAGGACACTTCGC
TGTACAGCAAATACCGCAACGAGTCTGAGAAGGGACTGGTGGGGCTAAGG
GAGGTCGATGGCACGGTGTCTTGGGGGTGGACCAGCCACAAAGAATGGCT
AGGCTACACCATCGTAGTATCCTCGACCTCGAACTACAACGTCGCGCTAA
GATACGCCGCCGGCAATGTCGCAAAGGCACGCCTATTTGTGGACGCGGAC
TCCTGCAACCCTTACACGCAATCGGAACACGAGATCGGAGTAGCCGTCAT
GCCGAGCAGCGGAGGGGAAATCGGGCCGTTCTCGAGAACGGTCCCTTTCG
CGGTATCCTCGACCTCGAACTACAACGTCGCGCTAAGATACGCCGCCGGC
AATGTCGCAAAGGCACGCCTATTTGTGGACGCGGACTCCTGCAACCCTTA
CACGCAATCGGAACACGAGATCGGAGTAGCCGTCATGCCGAGCAGCGGAG
GGGAAATCGGGCCGTTCTCGAGAACGGTCCCTTTCGCGACACAGCTGACG
GCGGGATCGCATTCTCTTCGCGTGTGTGTGCTCATTGGCGGATTCACGTT
GGATAAAATCGCGTTCACAGAGGCGGTAACAGACGGCGGCGTATGCAACA
AAGACGGAATACACAGCTGACGGCGGGATCGCATTCTCTTCGCGTGTGTG
TGCTCATTGGCGGATTCACGTTGGATAAAATCGCGTTCACAGAGGCGGTA
ACAGACGGCGGCGTATGCAACAAAGACGGAATGTGCGATGTGGCTGCCGG
GGAGGGCTGCAGGTCTTGCGGAGACGACTGCACATGCTCCAAAGGTTCTC
CGTATGGCGGGGTGGCCCCCACTATTCCTAGGTTCATCTGGGCTGTGCGA
TTCGACGAAGGCAACAACGTGCGATGTGGCTGCCGGGGAGGGCTGCAGGT
CTTGCGGAGACGACTGCACATGCTCCAAAGGTTCTCCGTATGGCGGGGTG
GCCCCCACTATTCCTAGGTTCATCTGGGCTGTGCGATTCGACGAAGGCAA
CAACGGTGAGGCGTACTGGGACAGCAGCCCCGAAAATCTGGGCATTACGG
GGTCCCGCGAGAGCTCGGTGGACATCGAGGCCGCGGCTGATGGGTCGTTC
TACGTTGGTTATGGTGTGCCAGGTGGTGAGGCGTACTGGGACAGCAGCCC
CGAAAATCTGGGCATTACGGGGTCCCGCGAGAGCTCGGTGGACATCGAGG
CCGCGGCTGATGGGTCGTTCTACGTTGGTTATGGTGTGCCAGGT
back to top