mRNA_H-paniculata_contig7755.15785.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI) HSP 1 Score: 362 bits (928), Expect = 2.200e-119 Identity = 163/277 (58.84%), Postives = 197/277 (71.12%), Query Frame = 1
Query: 1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
Q G ++ +CPHC QS+GPAA+RAR G WPH + GE NGNY E+D+++ RHG+CGDP QT EG NKY Q+N YPVLET+AE ++E+K+V+STYHWGH+E F+C+ADDL G D VTQ CFN+YP+DRA DD PIDP + GR+ +DPPCRA+ETDQ G GDV TAR+QLP G+TCERC++QM YYTGNSC H GY EFNP SWPS CAPSK DWI G CG+GD+YPEEFWNCAD+SITS P
Sbjct: 44 QEPGSPDINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGP 304
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 354 bits (908), Expect = 4.690e-118 Identity = 158/270 (58.52%), Postives = 191/270 (70.74%), Query Frame = 1
Query: 7 RGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISIT 816
R FE ME+CP C ++GP V+ R NTDP L YG G WP +Y +GE+ NGNY E D+I+ RHG+CGDP Q + EG N Y+ N +P+L T+ E V+E+K+ M+ YHWGH+EFFICNAD++ DG Q CFN YP+ RA D + SPIDPN+PGRYYVDP CR ETDQ+KP G G V+ A YQLP+GLTC+RCI+QM YYTGNSC H GYEEF P+SWPS CAP K DWI LD +CGE SYPEEFW CAD +IT
Sbjct: 9 RPFERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEM-EDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAIT 277
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI) HSP 1 Score: 352 bits (903), Expect = 7.860e-118 Identity = 160/277 (57.76%), Postives = 197/277 (71.12%), Query Frame = 1
Query: 1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
Q G ++ +CPHC QS+GPAAVRAR G WPH + GE NGNY E+++++ RHG+CGDP QT E NKY Q+N YPV ET+AE ++E+K+V+STYHWGH+E F+CNA +L GG D TVTQ CFN++P+DRA DD P DP++ GR+ +DPPCRA+ETDQ+ G DV TAR++LP GL+CERC++QMVYYTGNSC H GY EFNP SWPS CAPSK DWI G CG+GD+YPEEFWNCADISITS P
Sbjct: 47 QDAGSPDINYCPHCFQSRGPAAVRARG------------GDKPWPHFN----GERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGP 307
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE) HSP 1 Score: 356 bits (914), Expect = 4.360e-117 Identity = 173/344 (50.29%), Postives = 205/344 (59.59%), Query Frame = 1
Query: 1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHW-----------------------------------------------------------------------GHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITS 819
Q + ++ CPHC QS+GP+AVR R E NT+ L YG G WPHL SY R E+ NGNYYE ++ISVRHG+CGDP QT+ EG N Y Q+N YPV ++E +IE+K+V+STYHW GH+EFFICNA+D+ DG VTQGCFN +P+DRA DDGDASPIDP+H GRYY+DPPCRA ETDQ G GDV TARY+LP GLTC RCI+QMVYYTGN+C HPGY+EF+P S P CAP+K DW+ GMCGE YPEEFWNCADI ITS
Sbjct: 25 QESSYSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDM-SDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITS 367
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI) HSP 1 Score: 357 bits (917), Expect = 5.230e-115 Identity = 161/274 (58.76%), Postives = 197/274 (71.90%), Query Frame = 1
Query: 10 GFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
G ++ +CPHC QS+GPAA+RAR G WPH + GE NGNY E+++++ RHG+CGDP QT E NKY +N YPVLET+AE ++E K+V+STYHWGH+E F+C+ADDL GG D TVTQ CFN++P+DR DD SPIDP++ GR+ +DPPCRA+ETDQ G GDV TAR++LP GLTCERC++QMVYYTGNSC H GY EFNP SWPS CAP+K DWI G CG+GD+YPEEFWNCADISITS P
Sbjct: 49 GSPDINYCPHCFQSRGPAAIRARG------------GDKPWPHFN----GERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDGDP 306
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE) HSP 1 Score: 348 bits (894), Expect = 1.190e-114 Identity = 158/275 (57.45%), Postives = 194/275 (70.55%), Query Frame = 1
Query: 7 RGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
RG ++ +CPHC QS+GPAA+RAR G WPH + GE NGNY E+D+++ RHG+CGDP QT EG NKY Q+N YPVLET+AE ++E+K+V+STYHWGH+E F+C+ADDL G D VTQ CFN++P+DRA DD PIDP + GR+ +DPPCRA+ETDQ G GDV TAR+QLP G+TCERC++QM Y+ NSC H GY EFNP SWP CAPSK DWI G CG+GD+YPEEFWNCAD+SITS P
Sbjct: 17 RGSPDINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAENGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDGGP 273
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI) HSP 1 Score: 348 bits (892), Expect = 1.450e-113 Identity = 157/267 (58.80%), Postives = 189/267 (70.79%), Query Frame = 1
Query: 31 CPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
CPHC QS+GPAA+R R+ G WPH +G NGNY E+D+++ RHG+CGDP QT EGDNKY ++N YPVL T+AE V+E+K+++STYHWGH+E F+C+ DL G D VTQ CFN YP+DRA DD PIDP + GR+ +DPPCRA+ETDQ G GDV TARYQLP+G+ C+RC++QMVYYTGNSC H GY EFNP SWPS CAPSK DWI G CG+GD+YPEEFWNCADISITS P
Sbjct: 61 CPHCYQSRGPAAIRERS------------GDKPWPHY----QGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGP 311
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE) HSP 1 Score: 352 bits (902), Expect = 9.270e-111 Identity = 159/277 (57.40%), Postives = 198/277 (71.48%), Query Frame = 1
Query: 1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
Q G N+ +CPHC QS+G AAVRAR G WPH + G+ NGNY E+++++ RHG+CGDP QT EG N Y +N YPVLET+AE ++E K+V+STYHWGH+E F+C+A+DL GG D TVTQ CFN++P+DR DD SPIDP++ GR+ +DPPCRA+ETDQ G GDV TAR++LP+G++CERC++QMVYYTGNSC H GY EFNP SWPS CAP+K DWI G CG+GD+YPEEFWNCADISITS P
Sbjct: 46 QEAGSPNINYCPHCFQSRGAAAVRARG------------GDQPWPHFN----GDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDGDP 306
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 314 bits (805), Expect = 4.190e-101 Identity = 149/269 (55.39%), Postives = 181/269 (67.29%), Query Frame = 1
Query: 22 MEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRS 828
+E CPHC ++GP V+ RA N D L+ YGGG Y GE NGNY ET++I+ RHG+CGDP Q EG N Y+ NI + L++F V+EM +VM+ YHWGH EFF+CN DD+ DG TQ CFN +P+ RA DDGDASPIDPN+PGRYYVDP CR ET+QS + G + RY LPD + CE CI+QMVYYTGN+C H GYEEFNP+SWPS CAP+K DWI LD +CG YPEEFW C+D S+TS S
Sbjct: 46 VEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGE--EFPLYF-GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDM-DDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSIEGYN--IKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGS 307
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE) HSP 1 Score: 298 bits (763), Expect = 3.780e-94 Identity = 134/268 (50.00%), Postives = 175/268 (65.30%), Query Frame = 1
Query: 16 ENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITS 819
E E CP C+ S GP V+ + T+ L YG G WP L +Y +GE+ NGN+YE D+IS RHG+CGDP Q E N Y+ + LET E V+++KVV++ Y GH+EFFICN+ DL G Q CFN P+ RA D SPIDP +PGRYYV+PPC A E ++ P G G V+ +YQLP+GLTC+ C++QMV+YTGN+C H GY++F P SWPS+CAP+K +WI D MCG +YPEE W+C+DISIT+
Sbjct: 45 EKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHATEHPEALPDGAQDGYVINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCGMAGAYPEEHWSCSDISITT 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7755.15785.1 >prot_H-paniculata_contig7755.15785.1 ID=prot_H-paniculata_contig7755.15785.1|Name=mRNA_H-paniculata_contig7755.15785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp MEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPback to top mRNA from alignment at H-paniculata_contig7755:6595..9445+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7755.15785.1 ID=mRNA_H-paniculata_contig7755.15785.1|Name=mRNA_H-paniculata_contig7755.15785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2851bp|location=Sequence derived from alignment at H-paniculata_contig7755:6595..9445+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7755:6595..9445+ >mRNA_H-paniculata_contig7755.15785.1 ID=mRNA_H-paniculata_contig7755.15785.1|Name=mRNA_H-paniculata_contig7755.15785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1854bp|location=Sequence derived from alignment at H-paniculata_contig7755:6595..9445+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |