mRNA_H-paniculata_contig7755.15785.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7755.15785.1
Unique NamemRNA_H-paniculata_contig7755.15785.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 2.200e-119
Identity = 163/277 (58.84%), Postives = 197/277 (71.12%), Query Frame = 1
Query:    1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
            Q  G  ++ +CPHC QS+GPAA+RAR             G   WPH +    GE   NGNY E+D+++ RHG+CGDP QT  EG NKY Q+N  YPVLET+AE  ++E+K+V+STYHWGH+E F+C+ADDL  G D  VTQ CFN+YP+DRA DD    PIDP + GR+ +DPPCRA+ETDQ    G   GDV TAR+QLP G+TCERC++QM YYTGNSC H GY EFNP SWPS CAPSK DWI    G CG+GD+YPEEFWNCAD+SITS   P
Sbjct:   44 QEPGSPDINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAKNGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELLPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCGDGDAYPEEFWNCADVSITSDGGP 304          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 4.690e-118
Identity = 158/270 (58.52%), Postives = 191/270 (70.74%), Query Frame = 1
Query:    7 RGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISIT 816
            R FE ME+CP C  ++GP  V+ R   NTDP  L  YG G WP   +Y +GE+  NGNY E D+I+ RHG+CGDP Q + EG N Y+  N  +P+L T+ E  V+E+K+ M+ YHWGH+EFFICNAD++    DG   Q CFN YP+ RA  D + SPIDPN+PGRYYVDP CR  ETDQ+KP G   G V+ A YQLP+GLTC+RCI+QM YYTGNSC H GYEEF P+SWPS CAP K DWI LD  +CGE  SYPEEFW CAD +IT
Sbjct:    9 RPFERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEM-EDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGSYPEEFWACADFAIT 277          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 7.860e-118
Identity = 160/277 (57.76%), Postives = 197/277 (71.12%), Query Frame = 1
Query:    1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
            Q  G  ++ +CPHC QS+GPAAVRAR             G   WPH +    GE   NGNY E+++++ RHG+CGDP QT  E  NKY Q+N  YPV ET+AE  ++E+K+V+STYHWGH+E F+CNA +L GG D TVTQ CFN++P+DRA DD    P DP++ GR+ +DPPCRA+ETDQ+   G    DV TAR++LP GL+CERC++QMVYYTGNSC H GY EFNP SWPS CAPSK DWI    G CG+GD+YPEEFWNCADISITS   P
Sbjct:   47 QDAGSPDINYCPHCFQSRGPAAVRARG------------GDKPWPHFN----GERAENGNYIESEEVARRHGICGDPEQTAAESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQALLDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGP 307          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5JI36_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI36_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 4.360e-117
Identity = 173/344 (50.29%), Postives = 205/344 (59.59%), Query Frame = 1
Query:    1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHW-----------------------------------------------------------------------GHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITS 819
            Q   + ++  CPHC QS+GP+AVR R E NT+   L  YG G WPHL SY R E+  NGNYYE ++ISVRHG+CGDP QT+ EG N Y Q+N  YPV   ++E  +IE+K+V+STYHW                                                                       GH+EFFICNA+D+    DG VTQGCFN +P+DRA DDGDASPIDP+H GRYY+DPPCRA ETDQ    G   GDV TARY+LP GLTC RCI+QMVYYTGN+C HPGY+EF+P S P  CAP+K DW+    GMCGE   YPEEFWNCADI ITS
Sbjct:   25 QESSYSDINWCPHCFQSRGPSAVRERGEENTEEAVLAMYGRGEWPHLFSYERNEVHGNGNYYEPEEISVRHGICGDPEQTKAEGTNLYGQENSKYPVHGKYSEGGIIEIKIVVSTYHWVRELPELSAQGFICGIAYLAFLVLVAAFAVVVFVFVVEEGEWKSAPTLYAHRAYEAVPGKYRALDYVHGGSGHLEFFICNAEDM-SDPDGVVTQGCFNMHPLDRADDDGDASPIDPDHIGRYYLDPPCRAGETDQDTLPGAYPGDVATARYKLPSGLTCSRCILQMVYYTGNACKHPGYDEFDPVSVPDGCAPTKEDWVQTQLGMCGEDGRYPEEFWNCADIEITS 367          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 5.230e-115
Identity = 161/274 (58.76%), Postives = 197/274 (71.90%), Query Frame = 1
Query:   10 GFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
            G  ++ +CPHC QS+GPAA+RAR             G   WPH +    GE   NGNY E+++++ RHG+CGDP QT  E  NKY  +N  YPVLET+AE  ++E K+V+STYHWGH+E F+C+ADDL GG D TVTQ CFN++P+DR  DD   SPIDP++ GR+ +DPPCRA+ETDQ    G   GDV TAR++LP GLTCERC++QMVYYTGNSC H GY EFNP SWPS CAP+K DWI    G CG+GD+YPEEFWNCADISITS   P
Sbjct:   49 GSPDINYCPHCFQSRGPAAIRARG------------GDKPWPHFN----GERAENGNYIESEEVAQRHGICGDPEQTAAEDSNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEMLDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCGDGDAYPEEFWNCADISITSDGDP 306          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 1.190e-114
Identity = 158/275 (57.45%), Postives = 194/275 (70.55%), Query Frame = 1
Query:    7 RGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
            RG  ++ +CPHC QS+GPAA+RAR             G   WPH +    GE   NGNY E+D+++ RHG+CGDP QT  EG NKY Q+N  YPVLET+AE  ++E+K+V+STYHWGH+E F+C+ADDL  G D  VTQ CFN++P+DRA DD    PIDP + GR+ +DPPCRA+ETDQ    G   GDV TAR+QLP G+TCERC++QM Y+  NSC H GY EFNP SWP  CAPSK DWI    G CG+GD+YPEEFWNCAD+SITS   P
Sbjct:   17 RGSPDINYCPHCFQSRGPAAIRARG------------GDQPWPHFN----GERAENGNYIESDEVAQRHGVCGDPEQTAAEGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQELVPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCGDGDAYPEEFWNCADVSITSDGGP 273          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.450e-113
Identity = 157/267 (58.80%), Postives = 189/267 (70.79%), Query Frame = 1
Query:   31 CPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
            CPHC QS+GPAA+R R+            G   WPH     +G    NGNY E+D+++ RHG+CGDP QT  EGDNKY ++N  YPVL T+AE  V+E+K+++STYHWGH+E F+C+  DL  G D  VTQ CFN YP+DRA DD    PIDP + GR+ +DPPCRA+ETDQ    G   GDV TARYQLP+G+ C+RC++QMVYYTGNSC H GY EFNP SWPS CAPSK DWI    G CG+GD+YPEEFWNCADISITS   P
Sbjct:   61 CPHCYQSRGPAAIRERS------------GDKPWPHY----QGARAANGNYLESDEVAQRHGICGDPEQTAAEGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDLVEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCGDGDAYPEEFWNCADISITSDGGP 311          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 9.270e-111
Identity = 159/277 (57.40%), Postives = 198/277 (71.48%), Query Frame = 1
Query:    1 QYRGFENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRSP 831
            Q  G  N+ +CPHC QS+G AAVRAR             G   WPH +    G+   NGNY E+++++ RHG+CGDP QT  EG N Y  +N  YPVLET+AE  ++E K+V+STYHWGH+E F+C+A+DL GG D TVTQ CFN++P+DR  DD   SPIDP++ GR+ +DPPCRA+ETDQ    G   GDV TAR++LP+G++CERC++QMVYYTGNSC H GY EFNP SWPS CAP+K DWI    G CG+GD+YPEEFWNCADISITS   P
Sbjct:   46 QEAGSPNINYCPHCFQSRGAAAVRARG------------GDQPWPHFN----GDRAANGNYIESEEVAQRHGICGDPEQTAAEGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQELLDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCGDGDAYPEEFWNCADISITSDGDP 306          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 4.190e-101
Identity = 149/269 (55.39%), Postives = 181/269 (67.29%), Query Frame = 1
Query:   22 MEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITSSRS 828
            +E CPHC  ++GP  V+ RA  N D   L+ YGGG       Y  GE   NGNY ET++I+ RHG+CGDP Q   EG N Y+  NI +  L++F    V+EM +VM+ YHWGH EFF+CN DD+    DG  TQ CFN +P+ RA DDGDASPIDPN+PGRYYVDP CR  ET+QS  +  G    +  RY LPD + CE CI+QMVYYTGN+C H GYEEFNP+SWPS CAP+K DWI LD  +CG    YPEEFW C+D S+TS  S
Sbjct:   46 VEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGE--EFPLYF-GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDM-DDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSNSIEGYN--IKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQYPEEFWACSDFSMTSDGS 307          
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 3.780e-94
Identity = 134/268 (50.00%), Postives = 175/268 (65.30%), Query Frame = 1
Query:   16 ENMEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLPNGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVIEMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGDASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCERCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGDSYPEEFWNCADISITS 819
            E  E CP C+ S GP  V+ +    T+   L  YG G WP L +Y +GE+  NGN+YE D+IS RHG+CGDP Q   E  N Y+     +  LET  E  V+++KVV++ Y  GH+EFFICN+ DL  G      Q CFN  P+ RA  D   SPIDP +PGRYYV+PPC A E  ++ P G   G V+  +YQLP+GLTC+ C++QMV+YTGN+C H GY++F P SWPS+CAP+K +WI  D  MCG   +YPEE W+C+DISIT+
Sbjct:   45 EKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPKQFSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHATEHPEALPDGAQDGYVINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCGMAGAYPEEHWSCSDISITT 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7755.15785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD67_ECTSI2.200e-11958.84EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G4D7_ECTSI4.690e-11858.52EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LM93_ECTSI7.860e-11857.76EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JI36_9PHAE4.360e-11750.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LM92_ECTSI5.230e-11558.76EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KD35_9PHAE1.190e-11457.45CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LMF4_ECTSI1.450e-11358.80EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
A0A6H5KTY6_9PHAE9.270e-11157.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMS9_ECTSI4.190e-10155.39EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
A0A6H5JFL8_9PHAE3.780e-9450.00CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7755contigH-paniculata_contig7755:6595..9445 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.1
Seed ortholog evalue7.4e-108
Seed eggNOG ortholog2880.D7FSZ8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Fungal-type cellulose-binding domain
EggNOG OGs2CZUJ@1,2SBQR@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size948
Cds size927
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930963.7480912-UTR-H-paniculata_contig7755:6594..66151622930963.7480912-UTR-H-paniculata_contig7755:6594..6615Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7755 6595..6615 +
1691481529.754417-UTR-H-paniculata_contig7755:6594..66151691481529.754417-UTR-H-paniculata_contig7755:6594..6615Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7755 6595..6615 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930963.7707682-CDS-H-paniculata_contig7755:6615..66421622930963.7707682-CDS-H-paniculata_contig7755:6615..6642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 6616..6642 +
1691481529.7651436-CDS-H-paniculata_contig7755:6615..66421691481529.7651436-CDS-H-paniculata_contig7755:6615..6642Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 6616..6642 +
1622930963.7881916-CDS-H-paniculata_contig7755:6961..71501622930963.7881916-CDS-H-paniculata_contig7755:6961..7150Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 6962..7150 +
1691481529.7743661-CDS-H-paniculata_contig7755:6961..71501691481529.7743661-CDS-H-paniculata_contig7755:6961..7150Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 6962..7150 +
1622930963.80763-CDS-H-paniculata_contig7755:7594..77111622930963.80763-CDS-H-paniculata_contig7755:7594..7711Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 7595..7711 +
1691481529.7839735-CDS-H-paniculata_contig7755:7594..77111691481529.7839735-CDS-H-paniculata_contig7755:7594..7711Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 7595..7711 +
1622930963.821298-CDS-H-paniculata_contig7755:8034..83261622930963.821298-CDS-H-paniculata_contig7755:8034..8326Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 8035..8326 +
1691481529.7970395-CDS-H-paniculata_contig7755:8034..83261691481529.7970395-CDS-H-paniculata_contig7755:8034..8326Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 8035..8326 +
1622930963.8365502-CDS-H-paniculata_contig7755:8596..87701622930963.8365502-CDS-H-paniculata_contig7755:8596..8770Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 8597..8770 +
1691481529.8067713-CDS-H-paniculata_contig7755:8596..87701691481529.8067713-CDS-H-paniculata_contig7755:8596..8770Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 8597..8770 +
1622930963.8554358-CDS-H-paniculata_contig7755:9317..94451622930963.8554358-CDS-H-paniculata_contig7755:9317..9445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 9318..9445 +
1691481529.8152246-CDS-H-paniculata_contig7755:9317..94451691481529.8152246-CDS-H-paniculata_contig7755:9317..9445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7755 9318..9445 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7755.15785.1prot_H-paniculata_contig7755.15785.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7755 6616..9445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7755.15785.1

>prot_H-paniculata_contig7755.15785.1 ID=prot_H-paniculata_contig7755.15785.1|Name=mRNA_H-paniculata_contig7755.15785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp
MEHCPHCMQSKGPAAVRARAEANTDPTELETYGGGRWPHLDSYMRGELLP
NGNYYETDKISVRHGLCGDPGQTQPEGDNKYAQDNIVYPVLETFAESSVI
EMKVVMSTYHWGHMEFFICNADDLFGGADGTVTQGCFNKYPIDRAADDGD
ASPIDPNHPGRYYVDPPCRAAETDQSKPAGTGTGDVVTARYQLPDGLTCE
RCIIQMVYYTGNSCYHPGYEEFNPSSWPSECAPSKGDWITLDPGMCGEGD
SYPEEFWNCADISITSSRSPGPSPEPKPVPQPTAPEPEPTTPEPSPEADF
EPTPTPEQQ
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mRNA from alignment at H-paniculata_contig7755:6595..9445+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7755.15785.1 ID=mRNA_H-paniculata_contig7755.15785.1|Name=mRNA_H-paniculata_contig7755.15785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2851bp|location=Sequence derived from alignment at H-paniculata_contig7755:6595..9445+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATACAGAGGCTTTGAAAATATGGAGCATTGCCCCCACTGCATGCAGGT AAGAAGTGGAAGACTTGAGAGCGCTCGCATTCATACTGTAGTACTTACTA CATACATGAAGGTCTTTTGTTTTTACTGCTCAAAAGGGCGATGAGGAATA AGATTCATGTCTGGTTTGTCGCTTCCGAGACTTTTTCTTGTTTGGGCATT ATGGGCCAGTGATGTGAGATTAATGCGATCTTATCTCCAAAACGATATTG TGAATGTAGGAGGAATCGATGAGTATTTAGCACAGTTAGCCATCTATCTG TCTCGTGTTCTCGACACGCCCAAAGAGAGCCCCTCATCCCCACCTTCCCC CACCCCGATCCCCACAGTCCAAAGGTCCCGCCGCCGTGCGCGCGCGGGCC GAGGCCAACACGGACCCGACTGAGCTTGAGACATACGGCGGCGGGCGCTG GCCCCACCTCGACTCTTACATGAGGGGAGAGCTGCTGCCGAACGGAAACT ACTATGAGACCGACAAGATCTCTGTCCGCCATGGTCTGTGCGGTGACCCT GGACAGGTACAAAAATTCGTGGGTAAAAGAGGGTTATTCGGATGTGATCG AGAGATAGATGAGGTTCGGCAGGATTCGACCATACTTGCGTTAATTACGT GGTCTTTCTTCTCATCTCCCAAAATTGTGGTTGTGTTGGTCTCTCATTCA GCAACTAGTAGAAGTATATATTTTTACAACAATGTATAACAACGATTTGA AGAACTACCGCAAGCACCATCATCCAGCGGACGTGTGATAGATCAGAGCC ACCAGTTAGCTTTCAAGTTTTGTCTATCTGGGAGGTGTAACGGAATATGA TAAAGTGCGATATTTAGGGTACAACAACCGTTATGAAGCAAGAAGTATGG TCTGTACTGTAAAACGTTTCTCGACGCATCTGGATACTGGCTCTCTTGGC ATCCGTTGCCCCGCCCCGCGCTAACCCCCGACCAAACAAAAAATATTTAG ACGCAGCCAGAAGGCGACAACAAGTACGCGCAGGACAATATCGTGTACCC CGTGCTCGAGACCTTCGCGGAGAGCTCGGTGATCGAGATGAAGGTGGTCA TGTCCACGTACCATTGGGTGAGTGAGCTACAATCTGAACACACGCATGTA GAACATCGCTCATCCATGCGTCGTTGTTGGGGGTAGTGTCGGATGGGTCA TAGCTACCATATCTTCAGCAGAACTTACATGTCTTCGGTTTCTTACTTGT ACTGGTACGTGACATGACTCAAGGTTGTATGCTTTCTTACTTTTCCTTCA TGCCCTGTTTGCTTGGTATTCCGTTACCCCGGACACCGAATTCTTCGGGA ACCACGCATGTGGAACACATCGGAGTTATACGTGATGTCCTGGCTGAACC ATTCACCTTTCCCCCCACCTTCATCTCTTCTTCATAACAGGGCCACATGG AATTCTTCATCTGCAATGCCGACGACCTCTTCGGGGGGGCTGATGGTACC GTCACCCAGGGCTGTTTCAACAAGTACCCGATTGACAGGGCCGCCGATGA CGGTGACGCTAGCCCCATTGACCCTAACCACCCTGGCCGTTACTACGTGG ATCCTCCGTGCCGCGCGGCCGAGACCGACCAGTCTAAGCCAGCTGGGACC GGCACAGGAGACGTGGTGACCGCGCGCTACCAGCTACCCGACGGCCTGAC TTGCGAACGATGCATCATCCAGATGGTTTACTGTGAGTCATGTGGTTAAA GCGAATACCTTGGTTCGTTTTCGCGCGATTTGTCTAATCTTGGTGGTTGG GAATAGGGCTGATGACGGAACGGAATGCACAAGATTGCGTCCTGATACTT GATTCGAGCGTCGAGTGTCTCCCTCTGTCCCTCCGGAAGAACCTGTAATA GCGAACATTACCGTCCATGTTGATGAATCAACCCGAAACGTGTGCAAAAC GTATTTCATGTTACTGAACATCGCCCTCCCTTTGCCTTACCTCCAACTGC AGACACGGGAAACTCGTGCTACCACCCAGGATACGAAGAGTTCAACCCTT CCTCATGGCCCAGCGAGTGCGCGCCCAGCAAAGGGGACTGGATCACCCTG GACCCCGGCATGTGTGGTGAAGGCGACAGCTACCCTGAGGAGTTCTGGAA CTGCGCCGACATCTCCATTACCTCCAGTGGTGAGGTTTTGATATTATCGC GTCATAGTACCCTTTCCTGGCCAATGAAGCTCATATGATTTGACTCGTCT CTGTTTTACACATACCTTTTACATTTTTCGAATTTTGTAATAAACAGATT TTGAACAAATATAAATTTCTAATTTTTAAATAATCTATTTTCAACTAGGA TGATACTACTTATATGATGCGTCCCGAAGGACTTGAACCCTCGACAGCGC TGTTGTCTTGGGTCTTTCAAGGCAACCCCAGTGCTGCTGTTGCTGTTGAT GTTGTAATGGTGGTGAAAATGGTGGTGTGGCAATGCACAATGTCTGAGCT GAACGTGTTGTGCGATTCGTGGCGCTGCCTTGGGGGTAGAATGGAAGTAT TGTACTGCACGGATTTCATGGATGAGCGTTCTCCGTTGCGCATCTTCTCT TAACAAGACCGCTTTGGCATTCACAAAATAACCTGTACAAAATAACCCTT TCCGCCCCCCGATTCTTCTGGCCACCTACTCACCTCCCCCCCTCCTCCTC GACTTTCCGAACAAAAAAAGCAGGCAGATCCCCGGGACCATCTCCCGAAC CCAAGCCGGTCCCTCAGCCAACAGCCCCCGAGCCGGAACCAACCACACCA GAACCATCCCCCGAGGCCGATTTCGAACCCACGCCGACTCCCGAACAACA A
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Coding sequence (CDS) from alignment at H-paniculata_contig7755:6595..9445+

>mRNA_H-paniculata_contig7755.15785.1 ID=mRNA_H-paniculata_contig7755.15785.1|Name=mRNA_H-paniculata_contig7755.15785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1854bp|location=Sequence derived from alignment at H-paniculata_contig7755:6595..9445+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGCATTGCCCCCACTGCATGCAGATGGAGCATTGCCCCCACTGCAT
GCAGTCCAAAGGTCCCGCCGCCGTGCGCGCGCGGGCCGAGGCCAACACGG
ACCCGACTGAGCTTGAGACATACGGCGGCGGGCGCTGGCCCCACCTCGAC
TCTTACATGAGGGGAGAGCTGCTGCCGAACGGAAACTACTATGAGACCGA
CAAGATCTCTGTCCGCCATGGTCTGTGCGGTGACCCTGGACAGTCCAAAG
GTCCCGCCGCCGTGCGCGCGCGGGCCGAGGCCAACACGGACCCGACTGAG
CTTGAGACATACGGCGGCGGGCGCTGGCCCCACCTCGACTCTTACATGAG
GGGAGAGCTGCTGCCGAACGGAAACTACTATGAGACCGACAAGATCTCTG
TCCGCCATGGTCTGTGCGGTGACCCTGGACAGACGCAGCCAGAAGGCGAC
AACAAGTACGCGCAGGACAATATCGTGTACCCCGTGCTCGAGACCTTCGC
GGAGAGCTCGGTGATCGAGATGAAGGTGGTCATGTCCACGTACCATTGGA
CGCAGCCAGAAGGCGACAACAAGTACGCGCAGGACAATATCGTGTACCCC
GTGCTCGAGACCTTCGCGGAGAGCTCGGTGATCGAGATGAAGGTGGTCAT
GTCCACGTACCATTGGGGCCACATGGAATTCTTCATCTGCAATGCCGACG
ACCTCTTCGGGGGGGCTGATGGTACCGTCACCCAGGGCTGTTTCAACAAG
TACCCGATTGACAGGGCCGCCGATGACGGTGACGCTAGCCCCATTGACCC
TAACCACCCTGGCCGTTACTACGTGGATCCTCCGTGCCGCGCGGCCGAGA
CCGACCAGTCTAAGCCAGCTGGGACCGGCACAGGAGACGTGGTGACCGCG
CGCTACCAGCTACCCGACGGCCTGACTTGCGAACGATGCATCATCCAGAT
GGTTTACTGGCCACATGGAATTCTTCATCTGCAATGCCGACGACCTCTTC
GGGGGGGCTGATGGTACCGTCACCCAGGGCTGTTTCAACAAGTACCCGAT
TGACAGGGCCGCCGATGACGGTGACGCTAGCCCCATTGACCCTAACCACC
CTGGCCGTTACTACGTGGATCCTCCGTGCCGCGCGGCCGAGACCGACCAG
TCTAAGCCAGCTGGGACCGGCACAGGAGACGTGGTGACCGCGCGCTACCA
GCTACCCGACGGCCTGACTTGCGAACGATGCATCATCCAGATGGTTTACT
ACACGGGAAACTCGTGCTACCACCCAGGATACGAAGAGTTCAACCCTTCC
TCATGGCCCAGCGAGTGCGCGCCCAGCAAAGGGGACTGGATCACCCTGGA
CCCCGGCATGTGTGGTGAAGGCGACAGCTACCCTGAGGAGTTCTGGAACT
GCGCCGACATCTCCATTACCTCCAACACGGGAAACTCGTGCTACCACCCA
GGATACGAAGAGTTCAACCCTTCCTCATGGCCCAGCGAGTGCGCGCCCAG
CAAAGGGGACTGGATCACCCTGGACCCCGGCATGTGTGGTGAAGGCGACA
GCTACCCTGAGGAGTTCTGGAACTGCGCCGACATCTCCATTACCTCCAGC
AGATCCCCGGGACCATCTCCCGAACCCAAGCCGGTCCCTCAGCCAACAGC
CCCCGAGCCGGAACCAACCACACCAGAACCATCCCCCGAGGCCGATTTCG
AACCCACGCCGACTCCCGAACAACAAGCAGATCCCCGGGACCATCTCCCG
AACCCAAGCCGGTCCCTCAGCCAACAGCCCCCGAGCCGGAACCAACCACA
CCAGAACCATCCCCCGAGGCCGATTTCGAACCCACGCCGACTCCCGAACA
ACAA
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