mRNA_H-paniculata_contig7753.15781.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7753.15781.1
Unique NamemRNA_H-paniculata_contig7753.15781.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: D7G614_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G614_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 3.320e-139
Identity = 219/236 (92.80%), Postives = 226/236 (95.76%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGV+LAVEKRLTSPLLEPSSVEKIMEVD+HIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGG SKTMSRPFGVALLMAG DDRGAQLFFSDPSG+FVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKIN +NVEVASVT + G+ VY  EQL E+LQRL
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPLLEPSSVEKIMEVDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGFDDRGAQLFFSDPSGMFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINPDNVEVASVT-EKGYSVYTPEQLTEVLQRL 239          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A6V1KK02_HETAK (Proteasome subunit alpha type n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KK02_HETAK)

HSP 1 Score: 380 bits (975), Expect = 9.060e-126
Identity = 192/236 (81.36%), Postives = 215/236 (91.10%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            R+EYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGI+T EGV+LAVEKRLTSPLLEPSSVEKIME+D+HIGAAMSGLIADARTL+DHARVEAQNHRFTYDEP+R+EALTQA+CDLALSFGEGG  K MSRPFGVALLMAGCDD+G QLFFS+PSG FV YK KAIG+GSEGAQSTL+E YS+S T+ EAE LAV+ LKQVMEEKIN ENVEVASVT  +G++VY A+QL  ++ R+
Sbjct:    5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIKTNEGVVLAVEKRLTSPLLEPSSVEKIMEIDSHIGAAMSGLIADARTLIDHARVEAQNHRFTYDEPVRIEALTQAICDLALSFGEGGKEKKMSRPFGVALLMAGCDDKGPQLFFSEPSGTFVEYKAKAIGAGSEGAQSTLEESYSESFTMEEAENLAVTVLKQVMEEKINSENVEVASVTEANGYQVYTADQLSTIIGRV 240          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A835Z048_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z048_9STRA)

HSP 1 Score: 367 bits (943), Expect = 5.740e-121
Identity = 195/236 (82.63%), Postives = 210/236 (88.98%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSV KIMEVD HI AAMSGLIADARTLVDHARVEAQNH FTYDEPMRVEALTQAVCD+ALSFGE G  K MSRPFGVALL+AG DD+G QLFFSDPSG+F RYK KAIGSGSEGAQ+ LQE +S++ TL EAEALAV TLKQVMEEKI+ +NVEVASVT +DG+ VY+A  L  ++ RL
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVVKIMEVDKHIAAAMSGLIADARTLVDHARVEAQNHTFTYDEPMRVEALTQAVCDVALSFGEDGGGKKMSRPFGVALLIAGFDDQGPQLFFSDPSGMFTRYKAKAIGSGSEGAQTNLQESFSENFTLLEAEALAVQTLKQVMEEKISKDNVEVASVT-KDGYTVYDAAMLQTIIDRL 239          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A7S2V165_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V165_9STRA)

HSP 1 Score: 360 bits (923), Expect = 5.860e-118
Identity = 184/236 (77.97%), Postives = 209/236 (88.56%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYA+EAIKLGSTAVGIQTK+G+ILAVEKRLTSPL+EPSS+EKI E+D+HIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMR EALTQA+CD+ALSFGEGG  K MSRPFGVALL+AG D+ G QLFFSDPSG FV YK KAIG+GSEGA++TL+E YS+S TL EAE LA++ LKQVMEEK+N  NVEVA++T   GF +YN E+L  ++ RL
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYALEAIKLGSTAVGIQTKDGIILAVEKRLTSPLMEPSSMEKIFEIDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRPEALTQAICDVALSFGEGGKEKKMSRPFGVALLIAGHDESGPQLFFSDPSGTFVPYKAKAIGAGSEGAKATLEESYSESFTLEEAETLAMTVLKQVMEEKVNAGNVEVAAITS-SGFNMYNTEKLEAIIGRL 239          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A4D9D6B9_9STRA (Proteasome subunit alpha type n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B9_9STRA)

HSP 1 Score: 352 bits (903), Expect = 5.940e-115
Identity = 184/236 (77.97%), Postives = 206/236 (87.29%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVG+ TK GVILAVEKR++SPLLEP+SVEKIMEVDTHIGAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+RVEALTQ +CDLAL+F E GD K MSRPFGVALL+AG DD+G QLFFSDPSG + ++K KAIGSGSEGAQ+ LQE YSDS TL EAE LA+STLKQVMEEKI+ E VEV SVT ++GFK Y  E L  +L R+
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVT-KEGFKSYGKEALTAVLARI 239          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A7S4KBM8_9STRA (Proteasome subunit alpha type n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4KBM8_9STRA)

HSP 1 Score: 348 bits (893), Expect = 2.250e-113
Identity = 183/240 (76.25%), Postives = 207/240 (86.25%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGD---SKTMSRPFGVALLMAGCDDR-GAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVG+QTK G +LAVEKRLTSPLL+P+SVEKI E+D+HIGAAMSGL+ADARTLVDHARVEA NH FTYDEP+ VEALTQAVCDLALSFGEG D   SK MSRPFGVALL+AG D+  G QLFFSDPSG FV+YK KAIG+GSEGAQS L E YS+ +TL EAE LA++TLKQVMEEKI+ EN+E+A VT + GF +   E++GE+L RL
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKTGCVLAVEKRLTSPLLDPASVEKIAEIDSHIGAAMSGLVADARTLVDHARVEAVNHTFTYDEPIGVEALTQAVCDLALSFGEGSDGSSSKRMSRPFGVALLLAGVDELDGPQLFFSDPSGTFVQYKAKAIGAGSEGAQSNLSESYSEEMTLEEAEELALATLKQVMEEKISTENIELARVTKEKGFHIATVEEVGEVLGRL 244          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A1E7FH86_9STRA (Proteasome subunit alpha type n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH86_9STRA)

HSP 1 Score: 348 bits (892), Expect = 3.410e-113
Identity = 185/240 (77.08%), Postives = 208/240 (86.67%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGD---SKTMSRPFGVALLMAGCDD-RGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEG +LAVEKRLTSPLL+P SVEKI E+D+HIGAAMSGL+ADA+TLVDHARVEAQNH FTYDEP+ VE LTQAVCDLALSFGEG D   +K MSRPFGVALL+AG DD  G+QL+FSDPSG FVRYK KAIG+GSEGAQS L+E YSDS+TL EAE LA+STLKQVMEEKI+ EN+EVA  T   GFK+ + + +  +L+RL
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGCVLAVEKRLTSPLLDPESVEKIAEIDSHIGAAMSGLVADAKTLVDHARVEAQNHSFTYDEPIGVEPLTQAVCDLALSFGEGSDGDSAKRMSRPFGVALLLAGWDDLEGSQLYFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSDSMTLKEAEELALSTLKQVMEEKISTENIEVARATPA-GFKIVSHDDVAIVLERL 243          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: B8CCQ3_THAPS (Proteasome subunit alpha type n=2 Tax=Thalassiosira TaxID=35127 RepID=B8CCQ3_THAPS)

HSP 1 Score: 345 bits (884), Expect = 5.060e-112
Identity = 184/240 (76.67%), Postives = 205/240 (85.42%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDS---KTMSRPFGVALLMAGCDD-RGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVG+QTK G ILAVEKRLTSPLLEPSSVEKI E+D HIGAAMSGL+ADARTLVDHARVEAQNHRFTYDE + VEALTQ VCDLALSFGEG D    K MSRPFGVALL+AG DD +G QLFFSDPSG FV+YK KAIG+GSEGAQS+L E Y++ +TL EAE LA+S LKQVMEEKI+ ENVE+A VT + G+     E++G +L+RL
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKSGSILAVEKRLTSPLLEPSSVEKIAEIDVHIGAAMSGLVADARTLVDHARVEAQNHRFTYDEAIGVEALTQGVCDLALSFGEGSDGDKDKRMSRPFGVALLIAGHDDLKGHQLFFSDPSGTFVQYKAKAIGAGSEGAQSSLMESYNEDMTLEEAEELALSVLKQVMEEKISTENVELARVTEERGYHSATVEEVGVVLERL 244          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A7S3LEV1_9STRA (Proteasome subunit alpha type (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEV1_9STRA)

HSP 1 Score: 344 bits (882), Expect = 1.050e-111
Identity = 183/227 (80.62%), Postives = 203/227 (89.43%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEG--GDSKT-MSRPFGVALLMAGCDDR-GAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKV 669
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTA+G+QTKEG +LAVEKRLTSPLL+PSSVEKI E+D+HIGAAMSGL+ADARTLVDHARVEAQNH FTYDEP+ VEALTQAVCDLALSFGEG  GDSK  MSRPFGVALL+AG D+  G QLFFSDPSG FVR+K KAIG+GSEGAQS L+E YS+S+TL EAE LA+STLKQVMEEKI+ EN+E+A VT + GF V
Sbjct:   16 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLQTKEGCVLAVEKRLTSPLLDPSSVEKIAEIDSHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGQDGDSKKRMSRPFGVALLLAGYDELDGCQLFFSDPSGTFVRFKAKAIGAGSEGAQSNLEEAYSESMTLQEAENLALSTLKQVMEEKISTENIELARVTPEKGFHV 242          
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A6U3XD30_9STRA (Proteasome subunit alpha type n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U3XD30_9STRA)

HSP 1 Score: 342 bits (878), Expect = 4.020e-111
Identity = 186/240 (77.50%), Postives = 203/240 (84.58%), Query Frame = 1
Query:    1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDS---KTMSRPFGVALLMAGCDDR-GAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
            RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTK G +LAVEKRLTS LLEPSSVEKI E+DTHIGAAMSGL+ADARTLVDHARVEAQNH FTYDEP+ VEALTQAVCDLALSFGEG D    K MSRPFGVALL+AG D+  G QLFFSDPSG FVRYK KAIG+GSEGAQS L E YS+ ++L +AE LA+STLKQVMEEKI+ ENVE+A VT   GF     E++G +L RL
Sbjct:    5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKHGCVLAVEKRLTSTLLEPSSVEKIAEIDTHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGQDGDKDKRMSRPFGVALLLAGYDELDGPQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLGESYSEDMSLEDAEELALSTLKQVMEEKISTENVELARVTPGKGFHSATEEEVGIVLGRL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G614_ECTSI3.320e-13992.80Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
A0A6V1KK02_HETAK9.060e-12681.36Proteasome subunit alpha type n=1 Tax=Heterosigma ... [more]
A0A835Z048_9STRA5.740e-12182.63Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A7S2V165_9STRA5.860e-11877.97Proteasome subunit alpha type n=1 Tax=Fibrocapsa j... [more]
A0A4D9D6B9_9STRA5.940e-11577.97Proteasome subunit alpha type n=1 Tax=Nannochlorop... [more]
A0A7S4KBM8_9STRA2.250e-11376.25Proteasome subunit alpha type n=9 Tax=Bacillarioph... [more]
A0A1E7FH86_9STRA3.410e-11377.08Proteasome subunit alpha type n=1 Tax=Fragilariops... [more]
B8CCQ3_THAPS5.060e-11276.67Proteasome subunit alpha type n=2 Tax=Thalassiosir... [more]
A0A7S3LEV1_9STRA1.050e-11180.62Proteasome subunit alpha type (Fragment) n=1 Tax=A... [more]
A0A6U3XD30_9STRA4.020e-11177.50Proteasome subunit alpha type n=3 Tax=Bacillarioph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7753contigH-paniculata_contig7753:2728..9008 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue8.2e-80
Seed eggNOG ortholog2880.D7G614
Preferred namePSMA5
KEGG koko:K02729,ko:K12388
KEGG TC9.A.63.1.3
KEGG Pathwayko03050,ko04142,ko04722,ko04979,map03050,map04142,map04722,map04979
KEGG ModuleM00337,M00340
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005839,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0030071,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042175,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0090068,GO:0097708,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0176@2759
Ec32 ortholog descriptionProteasome alpha-subunit, N-terminal domain
Ec32 orthologEc-11_004720.1
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko02000,ko03051
Exons6
Model size1895
Cds size522
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7753.15781.1prot_H-paniculata_contig7753.15781.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7753 4185..7824 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930963.29991-UTR-H-paniculata_contig7753:2727..27841622930963.29991-UTR-H-paniculata_contig7753:2727..2784Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 2728..2784 +
1691481529.5285518-UTR-H-paniculata_contig7753:2727..27841691481529.5285518-UTR-H-paniculata_contig7753:2727..2784Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 2728..2784 +
1622930963.323347-UTR-H-paniculata_contig7753:3672..38011622930963.323347-UTR-H-paniculata_contig7753:3672..3801Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 3673..3801 +
1691481529.5421298-UTR-H-paniculata_contig7753:3672..38011691481529.5421298-UTR-H-paniculata_contig7753:3672..3801Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 3673..3801 +
1622930963.3402145-UTR-H-paniculata_contig7753:4181..41841622930963.3402145-UTR-H-paniculata_contig7753:4181..4184Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 4182..4184 +
1691481529.5512002-UTR-H-paniculata_contig7753:4181..41841691481529.5512002-UTR-H-paniculata_contig7753:4181..4184Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 4182..4184 +
1622930963.4312074-UTR-H-paniculata_contig7753:7824..90081622930963.4312074-UTR-H-paniculata_contig7753:7824..9008Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 7825..9008 +
1691481529.6079948-UTR-H-paniculata_contig7753:7824..90081691481529.6079948-UTR-H-paniculata_contig7753:7824..9008Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7753 7825..9008 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930963.3600185-CDS-H-paniculata_contig7753:4184..43581622930963.3600185-CDS-H-paniculata_contig7753:4184..4358Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 4185..4358 +
1691481529.560608-CDS-H-paniculata_contig7753:4184..43581691481529.560608-CDS-H-paniculata_contig7753:4184..4358Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 4185..4358 +
1622930963.3788114-CDS-H-paniculata_contig7753:5144..52221622930963.3788114-CDS-H-paniculata_contig7753:5144..5222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 5145..5222 +
1691481529.5703738-CDS-H-paniculata_contig7753:5144..52221691481529.5703738-CDS-H-paniculata_contig7753:5144..5222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 5145..5222 +
1622930963.3974652-CDS-H-paniculata_contig7753:5618..57741622930963.3974652-CDS-H-paniculata_contig7753:5618..5774Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 5619..5774 +
1691481529.5878892-CDS-H-paniculata_contig7753:5618..57741691481529.5878892-CDS-H-paniculata_contig7753:5618..5774Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 5619..5774 +
1622930963.4149928-CDS-H-paniculata_contig7753:7710..78241622930963.4149928-CDS-H-paniculata_contig7753:7710..7824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 7711..7824 +
1691481529.5997868-CDS-H-paniculata_contig7753:7710..78241691481529.5997868-CDS-H-paniculata_contig7753:7710..7824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7753 7711..7824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7753.15781.1

>prot_H-paniculata_contig7753.15781.1 ID=prot_H-paniculata_contig7753.15781.1|Name=mRNA_H-paniculata_contig7753.15781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
MEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVC
DLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCK
AIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVA
SVTMQDGFKVYNAEQLGELLQRL*
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mRNA from alignment at H-paniculata_contig7753:2728..9008+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7753.15781.1 ID=mRNA_H-paniculata_contig7753.15781.1|Name=mRNA_H-paniculata_contig7753.15781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6281bp|location=Sequence derived from alignment at H-paniculata_contig7753:2728..9008+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGAGTGAGTACGACCGCGGAGTGATCACCTTCTCACCGGAAGGTCGGCT ATTCCAGGTAGGCACATGCGCATGCCGTTATTCTCCATTTATTTTTTTTG CCAATCAATATAAATAAATTTGTGTGACAAATATTACGAGAAAGGTTGAA ATATGTCCTGACAACGGTGGTAAGATGGACGTCCTAAGCGCACACCACAA GCTGATTGGCCGACTCGGCAACGGCACACACCCAGGACACGAGTTCAAAC GAACCATGTCCTCACAGTGCCTTTAAAATTGTGCTCGCAGTGAAGATGGT GCCACGTGCCCATGAGAACAGGAACCACGTGCCCGGCCCAGGGGGGTGTC TGGTGTCCCTGTTCCATCACGTCGGTTGGGCTAGATCCCCAGCTGGTGCC AAGTGGCTAGTCATAGTGTGGTCTCTTCTGCTGAACAAATTCATGAGGCT GACCATAAGCGAGCCGCTCGGCAGGGAAATTGTTGGTCAAAGCCCAACGC CGAAGTACCGCAAACCCTACCCCCTGCCCTACTACTCCACACGAAGCGAA CCATTTTTTTTGCGAATGTTTGGACAATGATATTTGTTTTCTTTATTACA AGCTTATGATTTAATGGTTAACAGGTACCAAGGACCTACAACGGTTTCCC CCCCCTGTAATCTTCTTGACTTTCTGCTCTGTCAGCATATCCCCCCCCCC CACACTCTTGGCAAAGGATCCGGCCGGTCTTAATGTCGGAATAACGGCAA AAATACGAAGCTGTGTGCCCACCACAACAGACGTGATGCTTACAGCAACC CCAGCAGTTTTTTTCATCGTTTTATATCGGCTTGAGTCACACAGCCACGC AGCATACACTTTCCCGCTTCCCGGGCTCGACACGTGCCGCGTGCGCGGTT CCTTGTGTGTTTGAAACCCGCCGAAATTGAAATGGGGTCAACCAGGTGGA GTATGCCATAGAGGCCATCAAGCTGGGGTCGACGGCGGTAGGCATCCAAA CCAAGGAAGGCGTTATTCTGGCGGTGGAGAAACGTCTCACGTCGCCCCTG CTGGAGCCAAGCAGCGTCGAAAAAGTAGGTTCATTTTGATGGTTGTATCC GGCACGTTCAATTAACAGCTCATTTGTCTTCAAGCATTGTCTTCCGGTAG AATTTTCTGTAGTTCATGTATGTACATCTGTATGCGTCATCCTGGGCAGG GGTGATGTAGCTTGGGTCGCAACGTTTTGCATTTACCTGTATATAAGTGT TATCCAAAATTGAAGAGGGGGAAGGGATATGGTATTGGGGCATGCCCAAT TGTAACTGCGTTTTTTTCAGGATCACAGCGGGGGGTGTTGGTCGTTGCCC TTCTGTTTTGTGCTTCATTTGCCATGTGTGTTTTGTTGTATTATTCAATA GTAGGAAGATACACTTTTTGTAATCGTTACGTTTTTTGTTTTTGTTTTTC TCAGATCATGGAAGTGGACACCCACATCGGAGCGGCGATGAGCGGACTGA TTGCCGACGCCCGAACGCTCGTGGACCATGCTCGAGTGGAAGCGCAGAAC CACCGCTTCACCTATGATGAACCCATGCGAGTCGAGGCTCTGACGCAAGC GGTGTGCGACCTGGCGCTTAGCTTTGGAGAGGTATAATTGCGTGTGACTG TAGGCCAGTGGGCTACTGGACGTAGATCCTCCCCGCCACCTGGAGGTAGG CCGATAGCAGACTTGACCTAACACAGACGCCGCTGTGACCACTGCCATCA TCATTAGGTTGTTATATCATATGAATATGGTGGTAGTAATACGATGGGCA AGCGAGGGAATGTCCCGCCCTCAGTGCAATCTGGAATGTTGGACAATAAT GGCGATCGAGACAAGTAGTTTTATTGATGTAAACAAGCATTCAAGGATGA TGGAGGGCCTTGAGATTATGCCTGTTATATTAGAGCTCTAGTAGTGGTAG TAGCTGGACTATTTTGTTACTAATTAGGACGAGCACAGTGGGGGCTGAAG GCGGGGTTCCATTAATAATGAAACAAGTGACAATATTATTGTGGTGCAGA GGAGATGAACCCACCACGTACGGTCCTGACCCTTGAGGATGCCCGTCTAT ACCGCCGACCCACATATGACGGATCTACTGCAAAAATCAAGCAGTACTTA TTTCAAACACAACGCCTATGACACGATTTAATAGATAAAGAGCGGTCGCT ATTTAGACAGCCCAGTACGGATAGCACAACAGGAGTTATTAGCATGGTCT TGCCCCATACGATTGCAGCGCTTGCCACAATTAATACACGACGTGTTGTG TATGCACAGTTGATGATCACTATAGCACAGCTTCAATACAGGCTGACCAG AGCATGGATCCAAACGAAAGCACGTCGTTTCTGTGTCTCTCTGCGTCGCG TTTACGTCGCTTTGCAGGGAGGGGATTCCAAGACGATGAGCCGGCCGTTT GGCGTCGCTCTGCTCATGGCCGGCTGCGACGACAGGGGAGCTCAGGTACT CATATGTGCAATCTTGGTCCATATTATGTGTCCTTTCTTGCGTGCTGAAT GACCATTTGCACTGGCTGCCCCCTCTTGTAACTTATTTTCGCCTCGAATT TGCCTGTATTATTCACCATGTTTTCCGTCGATTTGGAGCTATTTACGTAC CGGTAATTTATATACCATGTACTGTATAGGGTATCGTTAATTTGCGTTCT CCTTGTATCGTTGATTTGGTTTCGCTGCTGCAGTCTTCAATACTCGGAGT TCTCCCCATCCCGTCAATCTGTCATGTGTTGTGATATGCTCGCTCTGTTG TTTCCGTATAGCATTCTCTAACGTCAGCTTCGCTAACACGCGCTCTCCCA CCCACCCTCACGACCTCATGGTCAATTAAAAAAACCAATAGCTGTTTTTC AGCGACCCATCTGGGCTGTTCGTCCGTTACAAGTGCAAGGCCATCGGCTC GGGCAGCGAAGGGGCACAGAGCACACTGCAAGAAGGTTACAGTGACTCGC TCACCTTGGCGGAGGCTGAGGCTTTGGCTGTATCTACCCTTAAACAGGTA TTTTATTAACATACAAGAGTTTTTGTCGTTGACGCGACAACGCTCGACAA GCGATAGCCAAGGTCAACGAGCAGTGACCAGATCAATCTGGCAGGGTGGG TGAGAGTGAGACACTCAAGCACTTCACTTTCTGCAGGGTAGTAGGTAATG TCTGTATTTATACCACCGTTGTTGCTGAGGCCAACAATAATTAATGGATG CATCACTAGACAAGCCATTACCACTCTGTTTCAAATGTCGGGCCAAGGAA AATCACACAGATAGCAAAACATGGGTAAGGTTGCCATACACAGAACTAAT TAGTGGCGCCTAGTCGACGAAGCTGACTTATCCCAACAGCGCCCACAACT AATCAAATGACTCGACAAACATGATTCGGAGCCACAGCCATTCGACTTGT GGAGGAATGCACTCAAACGCTGTTATTCTGTCGAGGCGTCGCCAGCTGCC GTGACGCCTGTCACAATTGCATCACCAGGAGTCTTCCCCGCTGACTCTTC AACTCCGACTGCACCACCACTCGTTATGCCAGTATCCTAACGCGGAGGTC GCGAAGTAATGCATCCAAAAACGTAGCGACTGCTTGTGCGGCCTATGGTT GCCCTTTTCTCAGCGGAGCGCGGTTCAATGTAATTCACCACAATAAAATA AACGGATGTTTATGCTCGTACAGGTTTTATACAAAGCACCACCACACAGC GGACAACGCTTTGGAAGCGCGGGATTTTTGGTGCAGTGTTGCTGTGATAA TCATGAGGCGTCCCAAGCAGGTCTCGCTGATGGGCAATGCCCGTTGCGTG CATTGCGCGCGATAATTGTGTCCGTTACATTAATTTTTACGGGGGTTTTC TCGGTAGTAATACCGAGGTAAAAATATCGCGGTATTCGGTATTCGTTTTT TTTTTTTTTTCGGTCCCCAGGAGACAGGAAGGAACCCATGCCATGCACTA CGTATACATTGCTGCTTTCGTGCGGCGCTTTGCCGGTTTCCCGGTGCGCC CCGCTTTCACCCTGTCTCGATCCCTGCGTGGGATGTCATCATAGTTGCGG TATTCGGTATTCGGTACCGACTGTAAAACACTCAATTTCCCGTTTACCGT AACGTGGAACCCCGTTACCGTACTGATGTCGTGCCTTCAAACTAGGAACT TTATAAGTCGTTGGAATGGGCTCTCGGAATAAACGAATCGCCTCCTTGTG GAACTCACCGCACACACCGTTTTCTACACGCACGGGTTTATGGCTGTATT TTGTATTTTGTGGTTGGGCAAGGCTTAGGCACCGAAATACTGTGCCAAAT GTCAGATACCGTACCGCACGATACCGAGAAGAAATAGGATCGTTCACAGA TACAGGTGTCTGAAAAATACATCGTTGCTACGGCGTGCGTAACCATTATA TGTGGATATTAAAAAACTCGCTGTGGTCATGCAATGCAAGGCTTATACCC ATTTTGCGCACAGCCTGCTCAGAGGGAGGCGGTCATCGTTGCGCGGCGGT GAGATGCATGCATCAAAGCCTTTCATGGGTGACATTACAGTAATACAATA TCAAGTGATGTATTATATTCGGATCATGACACGTTCAAAAAAAGAAATGA ATCAGGGGGCTCTGGCAGTTTTGGGGCCTAATTTTGGGGTTCTGATCAGG GTGCAGTACTGACGCCAGTTGCATTTGAACAGAACCGATTTTTTCTTGGG AGCTCATCAGTTCCTTGTAGCCATTGGATCTACTCTTTCGCAAGTTGTTC ATAGCTGAAAGCTTTCACCCTCGAGACCAAGGCGATTCTAAACTTGGGGA AGATGACCTAGCTATTTAAGTGTTGTCTTCGTGAGCATTTTTGTCTGATG GTGATACATGCAAAGCGCAAGGGTACTGACGTGCAAATTTTGAAGTTTTA TCAACAGTTGGTGACCTGTATACATGTTGTCAGGTGATGGAGGAGAAAAT CAACGTGGAAAATGTGGAGGTGGCAAGCGTTACGATGCAGGACGGGTTCA AGGTGTACAACGCAGAACAGCTAGGAGAACTACTGCAAAGATTGTGATCT ATCTTCGTTTTCTGCATTCGTTTTGTCTTCGGGGGTCTTTTTAGGGCGGT TGGTCAGTCGGTCGATTGTCCTTGAGATTTTGTTCGCTACGTTGCAAACT AGGTCTTCTTGTGTCTCATCCTTTTTTCTTCTGGCCTGGCTTCGTTTTGC TCCCAATATCAAGATAAAGACGTGCACGATGTCGAAGGACGGAGAAGCGA GGATTGGCGCGTTGGGAATAGTGTGTTTTTCTCTTTGTCGAGGATCGTCT AACCCGCGACTAATGGTGTGAGAATCGCGAGTGCTTTTCTATGAGGCAGG CGCCGGGCAGTGCTAAAACATGACAGTTTTTGAAACGTGTGCATGAAGGT TTTTTTTCGTGAACTAAAGTACGTGTCCATCTTGCGAGACGCGGCAACCG ACACAGCAGAGTATCTGCGTATGAAAAGGATGCGCAGGAGGGGATGCACT GCCAGGTATGGCAAGTAGTCAACGAGGTTATCCCCCCCCTGTCCAAGGCA GCTGCAGGACTGTTGTCGCTAGAGATGTGTGGTTGGTGTTGGAGAGCTGT TATAGTTATTCCTTATCGTTCACTTGGTAGTGCTTCTTGGCGACGTTGTG GGGTACTATGCCGTACGTACCTCTGCCCCAATCAGTATGTCTTGCATTAA TTCTGACCCATTTAGACGTTGGTGGTGCGTGCTGAGGTTCGATTTGAGCA TATCACGAAAACCTTACCCGTTTTCCACGAGTCTCTCATTCGTTCTTACC CATTCTTGTCGTGTCCTACCCGTTCCTGCGTCAGTTTTATCCTTGTCTCA TGAGCTTCTAATTCTAGATGTATGGGCTAGAAAGTCAATTTCCTCGTTGC TCCCAAGTCGTCAAATTATGCACCCTCTCTCCTCCTCTTGTCGACTGCAG GAGAGCACAACTCGACAAAATAAGTTCCTAACCGACCAAAACCAAGTGGG CAAAAGGGCTAGTGAAGACGGTACTGACACCAATTCTAGATATTATGCGT TCTTTCATCTTGACTGTTGGATTTTCTAGCTTTTCAGGCTTTCTCATTTT TTTTTGCAAGAGACAGGTCGAGGACATTTTTTGTATGAGCAATTAAGTTT TTCACTTATCGTTTTTCATGTCGAGAGGGCGGAGAAAAACTAAAAACGAG CTGGAGGATCATCGGCAAAAATCGCACTTTT
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Coding sequence (CDS) from alignment at H-paniculata_contig7753:2728..9008+

>mRNA_H-paniculata_contig7753.15781.1 ID=mRNA_H-paniculata_contig7753.15781.1|Name=mRNA_H-paniculata_contig7753.15781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig7753:2728..9008+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGTGGACACCCACATCGGAGCGGCGATGAGCGGACTGATTGCCGA
CGCCCGAACGCTCGTGGACCATGCTCGAGTGGAAGCGCAGAACCACCGCT
TCACCTATGATGAACCCATGCGAGTCGAGGCTCTGACGCAAGCGGTGTGC
GACCTGGCGCTTAGCTTTGGAGAGATGGAAGTGGACACCCACATCGGAGC
GGCGATGAGCGGACTGATTGCCGACGCCCGAACGCTCGTGGACCATGCTC
GAGTGGAAGCGCAGAACCACCGCTTCACCTATGATGAACCCATGCGAGTC
GAGGCTCTGACGCAAGCGGTGTGCGACCTGGCGCTTAGCTTTGGAGAGGG
AGGGGATTCCAAGACGATGAGCCGGCCGTTTGGCGTCGCTCTGCTCATGG
CCGGCTGCGACGACAGGGGAGCTCAGGGAGGGGATTCCAAGACGATGAGC
CGGCCGTTTGGCGTCGCTCTGCTCATGGCCGGCTGCGACGACAGGGGAGC
TCAGCTGTTTTTCAGCGACCCATCTGGGCTGTTCGTCCGTTACAAGTGCA
AGGCCATCGGCTCGGGCAGCGAAGGGGCACAGAGCACACTGCAAGAAGGT
TACAGTGACTCGCTCACCTTGGCGGAGGCTGAGGCTTTGGCTGTATCTAC
CCTTAAACAGCTGTTTTTCAGCGACCCATCTGGGCTGTTCGTCCGTTACA
AGTGCAAGGCCATCGGCTCGGGCAGCGAAGGGGCACAGAGCACACTGCAA
GAAGGTTACAGTGACTCGCTCACCTTGGCGGAGGCTGAGGCTTTGGCTGT
ATCTACCCTTAAACAGGTGATGGAGGAGAAAATCAACGTGGAAAATGTGG
AGGTGGCAAGCGTTACGATGCAGGACGGGTTCAAGGTGTACAACGCAGAA
CAGCTAGGAGAACTACTGCAAAGATTGTGAGTGATGGAGGAGAAAATCAA
CGTGGAAAATGTGGAGGTGGCAAGCGTTACGATGCAGGACGGGTTCAAGG
TGTACAACGCAGAACAGCTAGGAGAACTACTGCAAAGATTGTGA
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