mRNA_H-paniculata_contig7753.15781.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: D7G614_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G614_ECTSI) HSP 1 Score: 414 bits (1064), Expect = 3.320e-139 Identity = 219/236 (92.80%), Postives = 226/236 (95.76%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGV+LAVEKRLTSPLLEPSSVEKIMEVD+HIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGG SKTMSRPFGVALLMAG DDRGAQLFFSDPSG+FVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKIN +NVEVASVT + G+ VY EQL E+LQRL
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPLLEPSSVEKIMEVDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGFDDRGAQLFFSDPSGMFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINPDNVEVASVT-EKGYSVYTPEQLTEVLQRL 239
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A6V1KK02_HETAK (Proteasome subunit alpha type n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KK02_HETAK) HSP 1 Score: 380 bits (975), Expect = 9.060e-126 Identity = 192/236 (81.36%), Postives = 215/236 (91.10%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
R+EYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGI+T EGV+LAVEKRLTSPLLEPSSVEKIME+D+HIGAAMSGLIADARTL+DHARVEAQNHRFTYDEP+R+EALTQA+CDLALSFGEGG K MSRPFGVALLMAGCDD+G QLFFS+PSG FV YK KAIG+GSEGAQSTL+E YS+S T+ EAE LAV+ LKQVMEEKIN ENVEVASVT +G++VY A+QL ++ R+
Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIKTNEGVVLAVEKRLTSPLLEPSSVEKIMEIDSHIGAAMSGLIADARTLIDHARVEAQNHRFTYDEPVRIEALTQAICDLALSFGEGGKEKKMSRPFGVALLMAGCDDKGPQLFFSEPSGTFVEYKAKAIGAGSEGAQSTLEESYSESFTMEEAENLAVTVLKQVMEEKINSENVEVASVTEANGYQVYTADQLSTIIGRV 240
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A835Z048_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z048_9STRA) HSP 1 Score: 367 bits (943), Expect = 5.740e-121 Identity = 195/236 (82.63%), Postives = 210/236 (88.98%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSV KIMEVD HI AAMSGLIADARTLVDHARVEAQNH FTYDEPMRVEALTQAVCD+ALSFGE G K MSRPFGVALL+AG DD+G QLFFSDPSG+F RYK KAIGSGSEGAQ+ LQE +S++ TL EAEALAV TLKQVMEEKI+ +NVEVASVT +DG+ VY+A L ++ RL
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVVKIMEVDKHIAAAMSGLIADARTLVDHARVEAQNHTFTYDEPMRVEALTQAVCDVALSFGEDGGGKKMSRPFGVALLIAGFDDQGPQLFFSDPSGMFTRYKAKAIGSGSEGAQTNLQESFSENFTLLEAEALAVQTLKQVMEEKISKDNVEVASVT-KDGYTVYDAAMLQTIIDRL 239
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A7S2V165_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V165_9STRA) HSP 1 Score: 360 bits (923), Expect = 5.860e-118 Identity = 184/236 (77.97%), Postives = 209/236 (88.56%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYA+EAIKLGSTAVGIQTK+G+ILAVEKRLTSPL+EPSS+EKI E+D+HIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMR EALTQA+CD+ALSFGEGG K MSRPFGVALL+AG D+ G QLFFSDPSG FV YK KAIG+GSEGA++TL+E YS+S TL EAE LA++ LKQVMEEK+N NVEVA++T GF +YN E+L ++ RL
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYALEAIKLGSTAVGIQTKDGIILAVEKRLTSPLMEPSSMEKIFEIDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRPEALTQAICDVALSFGEGGKEKKMSRPFGVALLIAGHDESGPQLFFSDPSGTFVPYKAKAIGAGSEGAKATLEESYSESFTLEEAETLAMTVLKQVMEEKVNAGNVEVAAITS-SGFNMYNTEKLEAIIGRL 239
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A4D9D6B9_9STRA (Proteasome subunit alpha type n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B9_9STRA) HSP 1 Score: 352 bits (903), Expect = 5.940e-115 Identity = 184/236 (77.97%), Postives = 206/236 (87.29%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDSKTMSRPFGVALLMAGCDDRGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVG+ TK GVILAVEKR++SPLLEP+SVEKIMEVDTHIGAAMSGL+ DARTLVDHARVEAQNHRF+Y+EP+RVEALTQ +CDLAL+F E GD K MSRPFGVALL+AG DD+G QLFFSDPSG + ++K KAIGSGSEGAQ+ LQE YSDS TL EAE LA+STLKQVMEEKI+ E VEV SVT ++GFK Y E L +L R+
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGVCTKHGVILAVEKRISSPLLEPTSVEKIMEVDTHIGAAMSGLMPDARTLVDHARVEAQNHRFSYNEPIRVEALTQGICDLALNFAEDGDEKKMSRPFGVALLLAGYDDKGPQLFFSDPSGTYAQFKAKAIGSGSEGAQTNLQESYSDSFTLEEAEDLALSTLKQVMEEKISAEYVEVCSVT-KEGFKSYGKEALTAVLARI 239
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A7S4KBM8_9STRA (Proteasome subunit alpha type n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4KBM8_9STRA) HSP 1 Score: 348 bits (893), Expect = 2.250e-113 Identity = 183/240 (76.25%), Postives = 207/240 (86.25%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGD---SKTMSRPFGVALLMAGCDDR-GAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVG+QTK G +LAVEKRLTSPLL+P+SVEKI E+D+HIGAAMSGL+ADARTLVDHARVEA NH FTYDEP+ VEALTQAVCDLALSFGEG D SK MSRPFGVALL+AG D+ G QLFFSDPSG FV+YK KAIG+GSEGAQS L E YS+ +TL EAE LA++TLKQVMEEKI+ EN+E+A VT + GF + E++GE+L RL
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKTGCVLAVEKRLTSPLLDPASVEKIAEIDSHIGAAMSGLVADARTLVDHARVEAVNHTFTYDEPIGVEALTQAVCDLALSFGEGSDGSSSKRMSRPFGVALLLAGVDELDGPQLFFSDPSGTFVQYKAKAIGAGSEGAQSNLSESYSEEMTLEEAEELALATLKQVMEEKISTENIELARVTKEKGFHIATVEEVGEVLGRL 244
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A1E7FH86_9STRA (Proteasome subunit alpha type n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH86_9STRA) HSP 1 Score: 348 bits (892), Expect = 3.410e-113 Identity = 185/240 (77.08%), Postives = 208/240 (86.67%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGD---SKTMSRPFGVALLMAGCDD-RGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEG +LAVEKRLTSPLL+P SVEKI E+D+HIGAAMSGL+ADA+TLVDHARVEAQNH FTYDEP+ VE LTQAVCDLALSFGEG D +K MSRPFGVALL+AG DD G+QL+FSDPSG FVRYK KAIG+GSEGAQS L+E YSDS+TL EAE LA+STLKQVMEEKI+ EN+EVA T GFK+ + + + +L+RL
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGCVLAVEKRLTSPLLDPESVEKIAEIDSHIGAAMSGLVADAKTLVDHARVEAQNHSFTYDEPIGVEPLTQAVCDLALSFGEGSDGDSAKRMSRPFGVALLLAGWDDLEGSQLYFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSDSMTLKEAEELALSTLKQVMEEKISTENIEVARATPA-GFKIVSHDDVAIVLERL 243
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: B8CCQ3_THAPS (Proteasome subunit alpha type n=2 Tax=Thalassiosira TaxID=35127 RepID=B8CCQ3_THAPS) HSP 1 Score: 345 bits (884), Expect = 5.060e-112 Identity = 184/240 (76.67%), Postives = 205/240 (85.42%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDS---KTMSRPFGVALLMAGCDD-RGAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVG+QTK G ILAVEKRLTSPLLEPSSVEKI E+D HIGAAMSGL+ADARTLVDHARVEAQNHRFTYDE + VEALTQ VCDLALSFGEG D K MSRPFGVALL+AG DD +G QLFFSDPSG FV+YK KAIG+GSEGAQS+L E Y++ +TL EAE LA+S LKQVMEEKI+ ENVE+A VT + G+ E++G +L+RL
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKSGSILAVEKRLTSPLLEPSSVEKIAEIDVHIGAAMSGLVADARTLVDHARVEAQNHRFTYDEAIGVEALTQGVCDLALSFGEGSDGDKDKRMSRPFGVALLIAGHDDLKGHQLFFSDPSGTFVQYKAKAIGAGSEGAQSSLMESYNEDMTLEEAEELALSVLKQVMEEKISTENVELARVTEERGYHSATVEEVGVVLERL 244
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A7S3LEV1_9STRA (Proteasome subunit alpha type (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEV1_9STRA) HSP 1 Score: 344 bits (882), Expect = 1.050e-111 Identity = 183/227 (80.62%), Postives = 203/227 (89.43%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEG--GDSKT-MSRPFGVALLMAGCDDR-GAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKV 669
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTA+G+QTKEG +LAVEKRLTSPLL+PSSVEKI E+D+HIGAAMSGL+ADARTLVDHARVEAQNH FTYDEP+ VEALTQAVCDLALSFGEG GDSK MSRPFGVALL+AG D+ G QLFFSDPSG FVR+K KAIG+GSEGAQS L+E YS+S+TL EAE LA+STLKQVMEEKI+ EN+E+A VT + GF V
Sbjct: 16 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLQTKEGCVLAVEKRLTSPLLDPSSVEKIAEIDSHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGQDGDSKKRMSRPFGVALLLAGYDELDGCQLFFSDPSGTFVRFKAKAIGAGSEGAQSNLEEAYSESMTLQEAENLALSTLKQVMEEKISTENIELARVTPEKGFHV 242
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Match: A0A6U3XD30_9STRA (Proteasome subunit alpha type n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U3XD30_9STRA) HSP 1 Score: 342 bits (878), Expect = 4.020e-111 Identity = 186/240 (77.50%), Postives = 203/240 (84.58%), Query Frame = 1
Query: 1 RSEYDRGVITFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVILAVEKRLTSPLLEPSSVEKIMEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGDS---KTMSRPFGVALLMAGCDDR-GAQLFFSDPSGLFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLKQVMEEKINVENVEVASVTMQDGFKVYNAEQLGELLQRL 708
RSEYDRGV TFSPEGRLFQVEYAIEAIKLGSTAVGIQTK G +LAVEKRLTS LLEPSSVEKI E+DTHIGAAMSGL+ADARTLVDHARVEAQNH FTYDEP+ VEALTQAVCDLALSFGEG D K MSRPFGVALL+AG D+ G QLFFSDPSG FVRYK KAIG+GSEGAQS L E YS+ ++L +AE LA+STLKQVMEEKI+ ENVE+A VT GF E++G +L RL
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKHGCVLAVEKRLTSTLLEPSSVEKIAEIDTHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGQDGDKDKRMSRPFGVALLLAGYDELDGPQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLGESYSEDMSLEDAEELALSTLKQVMEEKISTENVELARVTPGKGFHSATEEEVGIVLGRL 244 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7753.15781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7753.15781.1 >prot_H-paniculata_contig7753.15781.1 ID=prot_H-paniculata_contig7753.15781.1|Name=mRNA_H-paniculata_contig7753.15781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp MEVDTHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMRVEALTQAVCback to top mRNA from alignment at H-paniculata_contig7753:2728..9008+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7753.15781.1 ID=mRNA_H-paniculata_contig7753.15781.1|Name=mRNA_H-paniculata_contig7753.15781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6281bp|location=Sequence derived from alignment at H-paniculata_contig7753:2728..9008+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7753:2728..9008+ >mRNA_H-paniculata_contig7753.15781.1 ID=mRNA_H-paniculata_contig7753.15781.1|Name=mRNA_H-paniculata_contig7753.15781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig7753:2728..9008+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |