mRNA_H-paniculata_contig7673.15673.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7673.15673.1
Unique NamemRNA_H-paniculata_contig7673.15673.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: D7FPJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ1_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 3.350e-147
Identity = 219/298 (73.49%), Postives = 242/298 (81.21%), Query Frame = 1
Query:  475 GLIPRGLATDAGVGGLGEVSFVVNEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
            G  P      AG    G V FV  E A  RN+DP  VAFVTGANRGIGLE+ RQLLE+  GTV+AACRDPSSA +LR LG  +GNE+RLD+VK+D+ DQ S+E  AEH +  + RVDLLFNVAG+LGDGK TPGPERS+R MDR+WLRHTLEVNT+GPMMLV+ALTPLLESP      AK G    + PS+VVNFSARVGSIGDN LGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTT+TGLSEPF+ANVKPEKLFTP YTVSQVLGIVD M E LSGGF+AFDGSRI W
Sbjct:    4 GSNPAMATAAAGEPSGGVVKFVKTEAAARRNADPGSVAFVTGANRGIGLEVTRQLLERAKGTVVAACRDPSSAADLRALGRIAGNEKRLDMVKMDIEDQTSLETAAEHVRSTYGRVDLLFNVAGVLGDGKNTPGPERSVRAMDRDWLRHTLEVNTIGPMMLVAALTPLLESP------AKKGDDGAKPPSVVVNFSARVGSIGDNGLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTDTGLSEPFQANVKPEKLFTPDYTVSQVLGIVDSMTEDLSGGFYAFDGSRIVW 295          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A836C8A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A3_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.950e-96
Identity = 152/270 (56.30%), Postives = 198/270 (73.33%), Query Frame = 1
Query:  562 RNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHR-RVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
            RN+D   V  +T A+RG+GLE+A+QL  +T G VIA+CR PS A  L+ L +S     R+ V++LDVTDQASV+  A H    H  R+D LFNVAG+LGDG+ TPGPERSL  + R+WLRH++EVN +GP+ML  A+ P L +    +G+AK        PS+VVNFSARVGSI DN LGGWHSYRMSKSALN ATK +++EL+R+  WAF+YHPGTT+T LS PF+ANVKPEKLFTPA+TV ++L + D MD+  +GGF+ + G+ + W
Sbjct:   32 RNADTGAVFLLTAASRGLGLELAKQLASRTQGHVIASCRQPSKALELQALAQSHPG--RMTVLELDVTDQASVDAAAAHVAALHNGRLDALFNVAGLLGDGRATPGPERSLGAIQRDWLRHSMEVNVIGPVMLAQAMAPHLRT--TGQGRAKT-------PSVVVNFSARVGSISDNRLGGWHSYRMSKSALNQATKCMALELKRQGTWAFAYHPGTTDTDLSRPFQANVKPEKLFTPAFTVGRMLDLCDNMDQQHTGGFYDYSGTFLLW 290          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2F9C9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9C9_9STRA)

HSP 1 Score: 271 bits (693), Expect = 1.010e-84
Identity = 137/234 (58.55%), Postives = 170/234 (72.65%), Query Frame = 1
Query:  667 AACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
            A CR P++A +L  L E+S    RL+V +LDV DQASVE  A    +KH+R D+L NVAGIL D      PER+L+ +DREW   TLEVNTVGP+ML  AL PLL S    +G AK  +  TR PS+V N SARVGSIGDN +GGW+SYR+SK+ALNMATK +S+EL+R  VW  + HPGTT+TGLS+PF+ NVKPEKLFT  +TVSQ+LG+V+ MD   +G FFA+DG  IEW
Sbjct:    1 AGCRSPAAATDLHALAETSSG--RLEVAQLDVGDQASVEAFAASVAEKHQRCDMLLNVAGILHDEAHPAAPERALKSVDREWFSKTLEVNTVGPLMLAQALEPLLRS--TGRGAAKTASGETRPPSVVANLSARVGSIGDNGMGGWYSYRISKAALNMATKNMSLELKRSGVWCVTLHPGTTDTGLSKPFQKNVKPEKLFTTKFTVSQLLGVVESMDVSHTGSFFAWDGQEIEW 230          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2YRX8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX8_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.790e-83
Identity = 138/272 (50.74%), Postives = 192/272 (70.59%), Query Frame = 1
Query:  562 RNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDG-KTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAG--APATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
            RN DP  V  VTGA+RGIGL+  + LLE+T GT++A CR PS+A  L +L ES  + +R+D+V LD+ +Q+++E+     ++K+ RVD LFNVAG+LGDG KTTPGPERS+  MDR WL  T+ VN +GP+ML   L+ ++ +   K+ ++K G  A   R  ++VVN SARVGSI DN LGGW+SYRMSKSALN AT+ +++EL+R+  WA + HPGTT T LS PF+ANVK   LF   +TV Q+L +VD +++  SGGF+ + G  + +
Sbjct:  114 RNQDPRAVFVVTGASRGIGLQFVKSLLERTKGTIVACCRSPSAATELIELRESMSSSKRIDIVALDLEEQSTIEKAGSFLREKYDRVDGLFNVAGLLGDGGKTTPGPERSISKMDRGWLEKTMAVNVIGPVMLTKELSSMIMTRR-KRQRSKEGDIADTERPIAVVVNLSARVGSIADNGLGGWYSYRMSKSALNQATRTMALELKRQSAWAVALHPGTTNTDLSRPFQANVKEGSLFPVEFTVGQLLDLVDRLEDKHSGGFYDWAGQSLSF 384          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A448YYN6_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYN6_9STRA)

HSP 1 Score: 266 bits (680), Expect = 7.850e-81
Identity = 141/297 (47.47%), Postives = 191/297 (64.31%), Query Frame = 1
Query:  508 GVGGLGEVSFVV----NEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGES--SGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAP------ATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
            GV    +V F V    + Q+ +RNSDPD V  V GA+RGIGL+   +LL  T G VIA CR P  A  L+ L  +    +  R++V+KLDV +Q S+E  A   K ++ RVDLL NVAGILGDGK TPGPERS+  ++REW+  T +VN +GP+ML   L PL+     + G+ KA +         R   +V N SARVGSI DN LGGW+SYRMSKSALN AT+ ++ EL+R+ VW  + HPGTT+T LS+PF+ NV+ ++LF   +TV  ++ ++D M+EH SGG + + G  I
Sbjct:   73 GVNVFEDVDFSVQGNPSSQSSIRNSDPDAVFLVNGASRGIGLQFVSKLLSDTKGRVIAGCRSPDDAPKLQDLLSTLDKKSRNRVEVIKLDVENQDSIELSAAEIKVQYGRVDLLLNVAGILGDGKNTPGPERSVAKIEREWMEKTFQVNVIGPVMLAKELAPLMTQAR-RTGRRKADSSDETLSEKQRAVGVVANLSARVGSISDNGLGGWYSYRMSKSALNQATRTLANELKRKSVWCIALHPGTTDTDLSKPFQKNVQKDRLFPVEFTVDSLMNVIDSMEEHNSGGLYDWAGKAI 368          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2UED2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UED2_9STRA)

HSP 1 Score: 263 bits (671), Expect = 5.170e-80
Identity = 127/278 (45.68%), Postives = 189/278 (67.99%), Query Frame = 1
Query:  544 NEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGES-----SGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
            +  A  RN DP+ V  VTGA+RGIGL+  + L+++T G ++A CR P +A  L    E+     S + +R++V+KLD+ DQ S++ ++   ++ + RVD+L NVAG+LGDG +TPGPERSL  +DR+W+  ++ VN +GP+ML  AL+PL+ SP  ++GK        R  +++ N SARVGSI DN LGGW+SYR SK+ALN AT+ +S EL+R+  W  + HPGTT+T LS+PF+ NV+ E+LF   +TV ++L ++D M+E  SGG + + G  I
Sbjct:   59 SSNAMKRNQDPNAVHVVTGASRGIGLQFVKSLIDRTEGKIVACCRSPENAHGLHTFLETMSLTDSLDRDRIEVLKLDIEDQTSIDELSNSIRNSYNRVDVLLNVAGLLGDGTSTPGPERSLAKLDRDWIEKSMAVNVIGPVMLSQALSPLMASP--QRGKED-----KRATTLIANLSARVGSISDNGLGGWYSYRFSKAALNQATRTMSHELKRKGTWTIALHPGTTDTDLSKPFQRNVQAERLFPVEFTVEKLLDVMDSMEEQNSGGLYDWAGKAI 329          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2HD28_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD28_9STRA)

HSP 1 Score: 256 bits (655), Expect = 3.610e-77
Identity = 127/270 (47.04%), Postives = 179/270 (66.30%), Query Frame = 1
Query:  562 RNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQ-LGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPAT--RLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
            RN DP+ V  V G++RGIGL+  + L++++ GT++A CR P SA+ L + L  S    +R+  ++LDV DQAS++  AE  K  + RVD LFNVAGILGDGK+ PGPERSL  +DR+W+  T+ VN +GP+ML  AL P++ S                 R  S++VN SARVGSI DN LGGW+SYR SKSALN AT+ ++ EL+R+  W  + HPGTT T LS+PF+ NV+  +LF   +TV ++L +VD M++  SGG + + G+ +
Sbjct:   95 RNGDPNAVFVVNGSSRGIGLQFVKSLVDRSQGTILACCRSPDSADKLNEFLSSSPQASQRVKTIQLDVEDQASIDAAAEEIKTSYNRVDCLFNVAGILGDGKSDPGPERSLSKLDRDWVEKTMAVNVIGPVMLSQALAPMMISKXXXXXXXXXXXXXXXXRAQSVIVNLSARVGSISDNELGGWYSYRFSKSALNQATRTMAHELKRQGTWTVALHPGTTNTDLSKPFQRNVQEGRLFPVEFTVGRLLDVVDGMEDRHSGGLYDWSGTAL 364          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S3PXF5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXF5_9STRA)

HSP 1 Score: 254 bits (648), Expect = 2.360e-76
Identity = 129/276 (46.74%), Postives = 182/276 (65.94%), Query Frame = 1
Query:  541 VNEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGES-SGNEERLDVVK-LDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
            ++  A  RN+D D V  VTGA+RGIGL+I + L  +T GT++A CR P  A++L    +S   NE R  ++K LD+ +Q ++E + +  +D H+RVD+L+NVAGILGDGK TPGPERSLR +DR W   ++ VN +GP+ L   L P++ S   K  + K         S++VN SARVGSI DN LGGW SYR SK+ALN A + ++ EL+R+       HPGTT+TGLS+PF+ NVK E+LF   +T S+++  VDCMDE  +GG + + G+ +
Sbjct:   81 ISSDADKRNNDADAVFVVTGASRGIGLQILKDLATRTKGTIVACCRAPKEADHLHSFIKSLPTNESRRILLKSLDLEEQETIETLGKEIEDSHKRVDVLYNVAGILGDGKNTPGPERSLRSLDRNWAMKSMNVNYIGPVSLSQVLAPMMRSTLKKDDRGK---------SVIVNLSARVGSISDNGLGGWISYRSSKAALNQANRTMAHELKRQGTLCICLHPGTTDTGLSKPFQGNVKKERLFPVEFTASRMIDAVDCMDELNTGGLYDWSGTAL 347          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S3L7K7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7K7_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.430e-75
Identity = 123/279 (44.09%), Postives = 182/279 (65.23%), Query Frame = 1
Query:  538 VVNEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPAT--RLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
            +V+ +++ RN DP+ V  VTGA+RGIGL+  + L  KT G ++A CR P  A  L +   +  N  R++V+ LD+ +Q+S+E      ++ + RVD+L NVAG+LGD KTTPGPERSL  +DR+W   +L +N +GP+M+   L PLL     ++   K     T  R  ++V N SARVGSI DN +GGW+SYR+SK+ LN AT+ +++EL R+ VW  + HPGTT+T LS+PF+ANVK E LF   +TV+Q+L ++D +    SGG + + G  + +
Sbjct:   72 LVSMESEKRNQDPEAVFVVTGASRGIGLQFVKALTTKTQGKIVACCRKPEQATQLNEFIGTLPNPSRVEVIPLDLEEQSSIEAFGTRVRNTYNRVDILLNVAGLLGDSKTTPGPERSLARVDRKWFETSLAINLIGPVMVTQELVPLLGQ---RRRPRKDNDDGTKDRPAAVVANLSARVGSISDNRIGGWYSYRISKAGLNQATRTMALELGRQSVWCVALHPGTTDTDLSKPFQANVKKESLFPVDFTVNQLLSVIDSVHAEHSGGLYDWAGKSVSF 347          
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: B7FYH7_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYH7_PHATC)

HSP 1 Score: 247 bits (631), Expect = 4.880e-75
Identity = 119/262 (45.42%), Postives = 174/262 (66.41%), Query Frame = 1
Query:  583 VAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
            V  VTGA+RGIGL+  + L+ +  G+++A CR P  AE L++   +  +  R+ +V LD+ DQ S+ER     K+   RVD+L NVAG+LGD KTTPGPERSL  ++R+W   TL +NT+GP+ML   L+PL+     +K K+      TR  +++ + SARVGSI DN LGGW+SYRMSKSALN AT+ +++E++R   W  + HPGTT+T LS+PF++NVK   LF   +T  +++ ++D M E+ SGG + + G  I +
Sbjct:    1 VFVVTGASRGIGLQFVKTLILRARGSIVACCRSPEKAELLQEFIATLEDPRRIRIVSLDLEDQTSIERAGAEIKEMFGRVDMLLNVAGLLGDAKTTPGPERSLAKVERDWFEKTLAINTIGPVMLSKELSPLMMQR--RKRKSSDNDTETRAVAVIASLSARVGSISDNGLGGWYSYRMSKSALNQATRTMALEMKRCSTWCIALHPGTTDTDLSKPFQSNVKDGSLFPVDFTTEKLMNVIDSMTENNSGGLYDWAGQAISF 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ1_ECTSI3.350e-14773.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8A3_9STRA1.950e-9656.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2F9C9_9STRA1.010e-8458.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2YRX8_9STRA1.790e-8350.74Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A448YYN6_9STRA7.850e-8147.47Uncharacterized protein n=2 Tax=Pseudo-nitzschia m... [more]
A0A7S2UED2_9STRA5.170e-8045.68Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2HD28_9STRA3.610e-7747.04Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3PXF5_9STRA2.360e-7646.74Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3L7K7_9STRA2.430e-7544.09Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7FYH7_PHATC4.880e-7545.42Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7673contigH-paniculata_contig7673:5924..8689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.1
Seed ortholog evalue7.7e-119
Seed eggNOG ortholog2880.D7FPJ1
KEGG koko:K19877
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010033,GO:0016491,GO:0042221,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0110095,GO:0110096,GO:1901700,GO:1901701,GO:1990748
EggNOG free text desc.cellular detoxification of aldehyde
EggNOG OGsCOG1028@1,KOG1611@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons4
Model size1617
Cds size1317
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7673.15673.1prot_H-paniculata_contig7673.15673.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7673 5978..8443 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930948.74943-UTR-H-paniculata_contig7673:5923..59771622930948.74943-UTR-H-paniculata_contig7673:5923..5977Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7673 5924..5977 +
1691481523.766096-UTR-H-paniculata_contig7673:5923..59771691481523.766096-UTR-H-paniculata_contig7673:5923..5977Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7673 5924..5977 +
1622930948.8428314-UTR-H-paniculata_contig7673:8443..86891622930948.8428314-UTR-H-paniculata_contig7673:8443..8689Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7673 8444..8689 +
1691481523.8182096-UTR-H-paniculata_contig7673:8443..86891691481523.8182096-UTR-H-paniculata_contig7673:8443..8689Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7673 8444..8689 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930948.7678833-CDS-H-paniculata_contig7673:5977..65781622930948.7678833-CDS-H-paniculata_contig7673:5977..6578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 5978..6578 +
1691481523.777657-CDS-H-paniculata_contig7673:5977..65781691481523.777657-CDS-H-paniculata_contig7673:5977..6578Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 5978..6578 +
1622930948.784759-CDS-H-paniculata_contig7673:6898..70591622930948.784759-CDS-H-paniculata_contig7673:6898..7059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 6899..7059 +
1691481523.7877064-CDS-H-paniculata_contig7673:6898..70591691481523.7877064-CDS-H-paniculata_contig7673:6898..7059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 6899..7059 +
1622930948.799886-CDS-H-paniculata_contig7673:7282..75911622930948.799886-CDS-H-paniculata_contig7673:7282..7591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 7283..7591 +
1691481523.8007932-CDS-H-paniculata_contig7673:7282..75911691481523.8007932-CDS-H-paniculata_contig7673:7282..7591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 7283..7591 +
1622930948.814589-CDS-H-paniculata_contig7673:8197..84431622930948.814589-CDS-H-paniculata_contig7673:8197..8443Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 8198..8443 +
1691481523.810603-CDS-H-paniculata_contig7673:8197..84431691481523.810603-CDS-H-paniculata_contig7673:8197..8443Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7673 8198..8443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7673.15673.1

>prot_H-paniculata_contig7673.15673.1 ID=prot_H-paniculata_contig7673.15673.1|Name=mRNA_H-paniculata_contig7673.15673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=439bp
MCNVHRMMIISKRGKRIAVTSAVKYPKVLMSVRLSLLNLFGLGSGGSSFM
LMTRMISGISNTPNAPCFAADSTAGREWITCSPTLTSYTRNDSSNKRFLS
CCNGRWHRDQPAMCITKLSSRSYSSKPHWGGRQCSDMRKPGLIPRGLATD
AGVGGLGEVSFVVNEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTA
GTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAK
DKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMM
LVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGW
HSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKP
EKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW*
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mRNA from alignment at H-paniculata_contig7673:5924..8689+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7673.15673.1 ID=mRNA_H-paniculata_contig7673.15673.1|Name=mRNA_H-paniculata_contig7673.15673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2766bp|location=Sequence derived from alignment at H-paniculata_contig7673:5924..8689+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAATAGTAGCAGCTTACGACATGGCTCCATTGTAACACCCAAACGATGA TCCAATGTGCAACGTGCATAGAATGATGATTATTTCGAAGAGAGGGAAAC GTATAGCTGTTACAAGTGCAGTAAAGTACCCAAAGGTCCTGATGTCCGTG CGTTTGTCTCTCTTGAATCTGTTCGGTCTTGGTAGTGGAGGTTCAAGCTT CATGTTGATGACAAGGATGATCAGCGGCATCAGCAACACACCGAATGCCC CCTGCTTCGCTGCTGATAGTACTGCTGGGCGAGAGTGGATCACCTGCTCG CCAACGTTAACGTCTTACACCCGTAATGACAGCAGTAACAAACGCTTTTT GAGCTGTTGCAACGGACGTTGGCATAGAGACCAGCCGGCAATGTGCATCA CCAAGCTGTCAAGTAGATCTTACAGTTCTAAACCCCACTGGGGTGGTCGA CAGTGCAGTGATATGAGGAAACCCGGACTTATTCCAAGGGGACTTGCAAC TGATGCTGGTGTTGGAGGTTTGGGGGAAGTGTCGTTCGTGGTAAATGAAC AAGCCAAGCTGAGGAACAGCGATCCTGACATGGTGGCCTTCGTCACAGGG GCTAACAGGGGCATCGGTCTGGAAATTGCGAGGCAGCTGCTGGAGAAGAC TGCTGGTGGGCAAGGACATGAATGAAGGATAAGACCGAGTGTGAAAGCCA TGTATGCATCCTGTTGTTTATGTTGAATAGGCCTCGCGATTCTGCTGCAC ACATGAATAGCTTTCATTCTGTCTTTCTCTTGTACATATTTCTGTACGGG AGGATTAGTTCATGATGTGTAAGGTGAGACAAGTTGCCTCATTCCCATTC TATCCAACGCAGTATATGCAAGCGGAGAGCTACTTGTACCTAACTGCACT CTCTGTACTGAGCAATCATTGTTCCACACGCACGTTCACCCAGCCCTGCA TTCAAATCTTTGCATATATCGCCAGGGACGGTGATTGCTGCATGTCGGGA CCCATCCTCGGCTGAAAACCTGCGTCAACTGGGTGAGTCAAGTGGCAACG AGGAGCGGCTAGATGTGGTTAAACTGGACGTGACGGACCAGGCTAGTGTG GAACGTGTTGCAGAGCACGCCAAAGATAAACACCGGGTGAGCAAGGGATA TCAACGAGGTTCTCCCCATAAATCAGGCTGCTGGGACAGTATTGCTTTCG TGAATATAGCGCTCCGTAGGTCCACCACACACGTACAATGCTATGCTATT CCATGCCTCGTACTGTTGCGTGTCGAGCTCATGCAATAATCAAAGCTGCT CATCTGTGCGATGGTCTGTCTTTCTTCGCTTTTGCTGCCCTATTTTCACG CTTCTGCAGCGGGTAGACCTATTGTTCAACGTAGCTGGGATATTGGGAGA CGGAAAGACTACGCCGGGCCCCGAGCGATCTCTGCGCGTGATGGATCGCG AGTGGCTGCGACACACATTGGAAGTGAATACCGTCGGGCCGATGATGTTG GTGTCAGCGTTGACGCCTCTGTTGGAAAGCCCGCCGATCAAGAAGGGGAA GGCCAAGGCTGGGGCACCGGCAACTCGATTACCGTCCATCGTTGTTAATT TCAGTGCGCGCGTGGGGTCAATTGGAGACAACAATTTGGGCGGATGGCAT TCGTACAGGATGTCCAAGGTAAAATAATTGTGTTCGCTGAATGTCAAATA CCTGGCGTAGTATCGTGATTGCATACGATGAAATAGGAGTTTGTACAAGT AACAGTAGATAATGGAAGTTTAGGACCGCTTTTGTCTCAAAGATCCCCAA CAGATCAAGATTTACTAATCCAAATGTATCCAAATTAGGTGAGTTCGATA TCTGTACAAGAGAACAAGTGCTCACATCCCTCGGCCCTTTGCGATCAGAG ATATTGCGGAGTCTTTGACCGAAATATTTTCATCCTAAGACGAAAGCGGC CCTAAACTTCTATAATTGGCTGTTAGGTGTATACCTCCTGTTTCGCTGTA GAAGGCACCCGCTACATCGACATCTATCTGGCCTGAATTATGGTTCCTCC ATGATATGGCCTAGCTTGCATTCACCCTACCTGGAATTGAGCCGTGATGT GCATCCTAGTATGCTATGTTATAACGCCTTATCGTCTAAACTGGAGCCCA GAAACCGTGCTCTCCCGCACCGCCGATTACTGGACAGTATCCGAACGAAG TGCCAACTTGACTGACGAGATTGTTTTTCGCGTCCCTTCCAATGCATTCT TGCCCTCCGCGTGGGCCCAACCAGTCCGCGCTGAATATGGCCACCAAGGG GATTTCAATCGAGCTGCGACGCCGACGTGTGTGGGCCTTCTCTTACCACC CGGGTACCACCGAAACCGGACTATCGGAGCCGTTCCGGGCGAACGTCAAG CCCGAGAAGCTCTTTACTCCAGCGTATACAGTTTCTCAAGTGTTGGGCAT TGTTGACTGCATGGACGAACACCTCTCGGGGGGATTTTTCGCTTTCGACG GTTCTAGAATCGAGTGGTGATTTTGTTGCGGTGCAGCAGGGCAAACGCGA TTGCGCTGTGAATACTCCTGTGCCAGGGGATCGAAGAGGCGTATGTAGTG CTGCATGTTTTGGTGACCCCAAGGGTATATTTTAAACTCGAAGTATACTC CCGACTATTTATTCAGCAAAGCGTCCGAAACACGTTCAAAGTTGATCATT TTAGCAGAGGGATTTTTCAAGACAACGAAGCGCCAGATATTAATTCCACT ATAGGATGGTTCGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig7673:5924..8689+

>mRNA_H-paniculata_contig7673.15673.1 ID=mRNA_H-paniculata_contig7673.15673.1|Name=mRNA_H-paniculata_contig7673.15673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2634bp|location=Sequence derived from alignment at H-paniculata_contig7673:5924..8689+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGCAACGTGCATAGAATGATGATTATTTCGAAGAGAGGGAAACGTAT
AGCTGTTACAAGTGCAGTAAAGTACCCAAAGGTCCTGATGTCCGTGCGTT
TGTCTCTCTTGAATCTGTTCGGTCTTGGTAGTGGAGGTTCAAGCTTCATG
TTGATGACAAGGATGATCAGCGGCATCAGCAACACACCGAATGCCCCCTG
CTTCGCTGCTGATAGTACTGCTGGGCGAGAGTGGATCACCTGCTCGCCAA
CGTTAACGTCTTACACCCGTAATGACAGCAGTAACAAACGCTTTTTGAGC
TGTTGCAACGGACGTTGGCATAGAGACCAGCCGGCAATGTGCATCACCAA
GCTGTCAAGTAGATCTTACAGTTCTAAACCCCACTGGGGTGGTCGACAGT
GCAGTGATATGAGGAAACCCGGACTTATTCCAAGGGGACTTGCAACTGAT
GCTGGTGTTGGAGGTTTGGGGGAAGTGTCGTTCGTGGTAAATGAACAAGC
CAAGCTGAGGAACAGCGATCCTGACATGGTGGCCTTCGTCACAGGGGCTA
ACAGGGGCATCGGTCTGGAAATTGCGAGGCAGCTGCTGGAGAAGACTGCT
GATGTGCAACGTGCATAGAATGATGATTATTTCGAAGAGAGGGAAACGTA
TAGCTGTTACAAGTGCAGTAAAGTACCCAAAGGTCCTGATGTCCGTGCGT
TTGTCTCTCTTGAATCTGTTCGGTCTTGGTAGTGGAGGTTCAAGCTTCAT
GTTGATGACAAGGATGATCAGCGGCATCAGCAACACACCGAATGCCCCCT
GCTTCGCTGCTGATAGTACTGCTGGGCGAGAGTGGATCACCTGCTCGCCA
ACGTTAACGTCTTACACCCGTAATGACAGCAGTAACAAACGCTTTTTGAG
CTGTTGCAACGGACGTTGGCATAGAGACCAGCCGGCAATGTGCATCACCA
AGCTGTCAAGTAGATCTTACAGTTCTAAACCCCACTGGGGTGGTCGACAG
TGCAGTGATATGAGGAAACCCGGACTTATTCCAAGGGGACTTGCAACTGA
TGCTGGTGTTGGAGGTTTGGGGGAAGTGTCGTTCGTGGTAAATGAACAAG
CCAAGCTGAGGAACAGCGATCCTGACATGGTGGCCTTCGTCACAGGGGCT
AACAGGGGCATCGGTCTGGAAATTGCGAGGCAGCTGCTGGAGAAGACTGC
TGGGACGGTGATTGCTGCATGTCGGGACCCATCCTCGGCTGAAAACCTGC
GTCAACTGGGTGAGTCAAGTGGCAACGAGGAGCGGCTAGATGTGGTTAAA
CTGGACGTGACGGACCAGGCTAGTGTGGAACGTGTTGCAGAGCACGCCAA
AGATAAACACCGGGGACGGTGATTGCTGCATGTCGGGACCCATCCTCGGC
TGAAAACCTGCGTCAACTGGGTGAGTCAAGTGGCAACGAGGAGCGGCTAG
ATGTGGTTAAACTGGACGTGACGGACCAGGCTAGTGTGGAACGTGTTGCA
GAGCACGCCAAAGATAAACACCGGCGGGTAGACCTATTGTTCAACGTAGC
TGGGATATTGGGAGACGGAAAGACTACGCCGGGCCCCGAGCGATCTCTGC
GCGTGATGGATCGCGAGTGGCTGCGACACACATTGGAAGTGAATACCGTC
GGGCCGATGATGTTGGTGTCAGCGTTGACGCCTCTGTTGGAAAGCCCGCC
GATCAAGAAGGGGAAGGCCAAGGCTGGGGCACCGGCAACTCGATTACCGT
CCATCGTTGTTAATTTCAGTGCGCGCGTGGGGTCAATTGGAGACAACAAT
TTGGGCGGATGGCATTCGTACAGGATGTCCAAGCGGGTAGACCTATTGTT
CAACGTAGCTGGGATATTGGGAGACGGAAAGACTACGCCGGGCCCCGAGC
GATCTCTGCGCGTGATGGATCGCGAGTGGCTGCGACACACATTGGAAGTG
AATACCGTCGGGCCGATGATGTTGGTGTCAGCGTTGACGCCTCTGTTGGA
AAGCCCGCCGATCAAGAAGGGGAAGGCCAAGGCTGGGGCACCGGCAACTC
GATTACCGTCCATCGTTGTTAATTTCAGTGCGCGCGTGGGGTCAATTGGA
GACAACAATTTGGGCGGATGGCATTCGTACAGGATGTCCAAGTCCGCGCT
GAATATGGCCACCAAGGGGATTTCAATCGAGCTGCGACGCCGACGTGTGT
GGGCCTTCTCTTACCACCCGGGTACCACCGAAACCGGACTATCGGAGCCG
TTCCGGGCGAACGTCAAGCCCGAGAAGCTCTTTACTCCAGCGTATACAGT
TTCTCAAGTGTTGGGCATTGTTGACTGCATGGACGAACACCTCTCGGGGG
GATTTTTCGCTTTCGACGGTTCTAGAATCGAGTGGTGATCCGCGCTGAAT
ATGGCCACCAAGGGGATTTCAATCGAGCTGCGACGCCGACGTGTGTGGGC
CTTCTCTTACCACCCGGGTACCACCGAAACCGGACTATCGGAGCCGTTCC
GGGCGAACGTCAAGCCCGAGAAGCTCTTTACTCCAGCGTATACAGTTTCT
CAAGTGTTGGGCATTGTTGACTGCATGGACGAACACCTCTCGGGGGGATT
TTTCGCTTTCGACGGTTCTAGAATCGAGTGGTGA
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