mRNA_H-paniculata_contig7673.15673.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: D7FPJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ1_ECTSI) HSP 1 Score: 433 bits (1114), Expect = 3.350e-147 Identity = 219/298 (73.49%), Postives = 242/298 (81.21%), Query Frame = 1
Query: 475 GLIPRGLATDAGVGGLGEVSFVVNEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
G P AG G V FV E A RN+DP VAFVTGANRGIGLE+ RQLLE+ GTV+AACRDPSSA +LR LG +GNE+RLD+VK+D+ DQ S+E AEH + + RVDLLFNVAG+LGDGK TPGPERS+R MDR+WLRHTLEVNT+GPMMLV+ALTPLLESP AK G + PS+VVNFSARVGSIGDN LGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTT+TGLSEPF+ANVKPEKLFTP YTVSQVLGIVD M E LSGGF+AFDGSRI W
Sbjct: 4 GSNPAMATAAAGEPSGGVVKFVKTEAAARRNADPGSVAFVTGANRGIGLEVTRQLLERAKGTVVAACRDPSSAADLRALGRIAGNEKRLDMVKMDIEDQTSLETAAEHVRSTYGRVDLLFNVAGVLGDGKNTPGPERSVRAMDRDWLRHTLEVNTIGPMMLVAALTPLLESP------AKKGDDGAKPPSVVVNFSARVGSIGDNGLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTDTGLSEPFQANVKPEKLFTPDYTVSQVLGIVDSMTEDLSGGFYAFDGSRIVW 295
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A836C8A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A3_9STRA) HSP 1 Score: 303 bits (777), Expect = 1.950e-96 Identity = 152/270 (56.30%), Postives = 198/270 (73.33%), Query Frame = 1
Query: 562 RNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHR-RVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
RN+D V +T A+RG+GLE+A+QL +T G VIA+CR PS A L+ L +S R+ V++LDVTDQASV+ A H H R+D LFNVAG+LGDG+ TPGPERSL + R+WLRH++EVN +GP+ML A+ P L + +G+AK PS+VVNFSARVGSI DN LGGWHSYRMSKSALN ATK +++EL+R+ WAF+YHPGTT+T LS PF+ANVKPEKLFTPA+TV ++L + D MD+ +GGF+ + G+ + W
Sbjct: 32 RNADTGAVFLLTAASRGLGLELAKQLASRTQGHVIASCRQPSKALELQALAQSHPG--RMTVLELDVTDQASVDAAAAHVAALHNGRLDALFNVAGLLGDGRATPGPERSLGAIQRDWLRHSMEVNVIGPVMLAQAMAPHLRT--TGQGRAKT-------PSVVVNFSARVGSISDNRLGGWHSYRMSKSALNQATKCMALELKRQGTWAFAYHPGTTDTDLSRPFQANVKPEKLFTPAFTVGRMLDLCDNMDQQHTGGFYDYSGTFLLW 290
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2F9C9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9C9_9STRA) HSP 1 Score: 271 bits (693), Expect = 1.010e-84 Identity = 137/234 (58.55%), Postives = 170/234 (72.65%), Query Frame = 1
Query: 667 AACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
A CR P++A +L L E+S RL+V +LDV DQASVE A +KH+R D+L NVAGIL D PER+L+ +DREW TLEVNTVGP+ML AL PLL S +G AK + TR PS+V N SARVGSIGDN +GGW+SYR+SK+ALNMATK +S+EL+R VW + HPGTT+TGLS+PF+ NVKPEKLFT +TVSQ+LG+V+ MD +G FFA+DG IEW
Sbjct: 1 AGCRSPAAATDLHALAETSSG--RLEVAQLDVGDQASVEAFAASVAEKHQRCDMLLNVAGILHDEAHPAAPERALKSVDREWFSKTLEVNTVGPLMLAQALEPLLRS--TGRGAAKTASGETRPPSVVANLSARVGSIGDNGMGGWYSYRISKAALNMATKNMSLELKRSGVWCVTLHPGTTDTGLSKPFQKNVKPEKLFTTKFTVSQLLGVVESMDVSHTGSFFAWDGQEIEW 230
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2YRX8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX8_9STRA) HSP 1 Score: 273 bits (699), Expect = 1.790e-83 Identity = 138/272 (50.74%), Postives = 192/272 (70.59%), Query Frame = 1
Query: 562 RNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDG-KTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAG--APATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
RN DP V VTGA+RGIGL+ + LLE+T GT++A CR PS+A L +L ES + +R+D+V LD+ +Q+++E+ ++K+ RVD LFNVAG+LGDG KTTPGPERS+ MDR WL T+ VN +GP+ML L+ ++ + K+ ++K G A R ++VVN SARVGSI DN LGGW+SYRMSKSALN AT+ +++EL+R+ WA + HPGTT T LS PF+ANVK LF +TV Q+L +VD +++ SGGF+ + G + +
Sbjct: 114 RNQDPRAVFVVTGASRGIGLQFVKSLLERTKGTIVACCRSPSAATELIELRESMSSSKRIDIVALDLEEQSTIEKAGSFLREKYDRVDGLFNVAGLLGDGGKTTPGPERSISKMDRGWLEKTMAVNVIGPVMLTKELSSMIMTRR-KRQRSKEGDIADTERPIAVVVNLSARVGSIADNGLGGWYSYRMSKSALNQATRTMALELKRQSAWAVALHPGTTNTDLSRPFQANVKEGSLFPVEFTVGQLLDLVDRLEDKHSGGFYDWAGQSLSF 384
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A448YYN6_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYN6_9STRA) HSP 1 Score: 266 bits (680), Expect = 7.850e-81 Identity = 141/297 (47.47%), Postives = 191/297 (64.31%), Query Frame = 1
Query: 508 GVGGLGEVSFVV----NEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGES--SGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAP------ATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
GV +V F V + Q+ +RNSDPD V V GA+RGIGL+ +LL T G VIA CR P A L+ L + + R++V+KLDV +Q S+E A K ++ RVDLL NVAGILGDGK TPGPERS+ ++REW+ T +VN +GP+ML L PL+ + G+ KA + R +V N SARVGSI DN LGGW+SYRMSKSALN AT+ ++ EL+R+ VW + HPGTT+T LS+PF+ NV+ ++LF +TV ++ ++D M+EH SGG + + G I
Sbjct: 73 GVNVFEDVDFSVQGNPSSQSSIRNSDPDAVFLVNGASRGIGLQFVSKLLSDTKGRVIAGCRSPDDAPKLQDLLSTLDKKSRNRVEVIKLDVENQDSIELSAAEIKVQYGRVDLLLNVAGILGDGKNTPGPERSVAKIEREWMEKTFQVNVIGPVMLAKELAPLMTQAR-RTGRRKADSSDETLSEKQRAVGVVANLSARVGSISDNGLGGWYSYRMSKSALNQATRTLANELKRKSVWCIALHPGTTDTDLSKPFQKNVQKDRLFPVEFTVDSLMNVIDSMEEHNSGGLYDWAGKAI 368
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2UED2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UED2_9STRA) HSP 1 Score: 263 bits (671), Expect = 5.170e-80 Identity = 127/278 (45.68%), Postives = 189/278 (67.99%), Query Frame = 1
Query: 544 NEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGES-----SGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
+ A RN DP+ V VTGA+RGIGL+ + L+++T G ++A CR P +A L E+ S + +R++V+KLD+ DQ S++ ++ ++ + RVD+L NVAG+LGDG +TPGPERSL +DR+W+ ++ VN +GP+ML AL+PL+ SP ++GK R +++ N SARVGSI DN LGGW+SYR SK+ALN AT+ +S EL+R+ W + HPGTT+T LS+PF+ NV+ E+LF +TV ++L ++D M+E SGG + + G I
Sbjct: 59 SSNAMKRNQDPNAVHVVTGASRGIGLQFVKSLIDRTEGKIVACCRSPENAHGLHTFLETMSLTDSLDRDRIEVLKLDIEDQTSIDELSNSIRNSYNRVDVLLNVAGLLGDGTSTPGPERSLAKLDRDWIEKSMAVNVIGPVMLSQALSPLMASP--QRGKED-----KRATTLIANLSARVGSISDNGLGGWYSYRFSKAALNQATRTMSHELKRKGTWTIALHPGTTDTDLSKPFQRNVQAERLFPVEFTVEKLLDVMDSMEEQNSGGLYDWAGKAI 329
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S2HD28_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD28_9STRA) HSP 1 Score: 256 bits (655), Expect = 3.610e-77 Identity = 127/270 (47.04%), Postives = 179/270 (66.30%), Query Frame = 1
Query: 562 RNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQ-LGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPAT--RLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
RN DP+ V V G++RGIGL+ + L++++ GT++A CR P SA+ L + L S +R+ ++LDV DQAS++ AE K + RVD LFNVAGILGDGK+ PGPERSL +DR+W+ T+ VN +GP+ML AL P++ S R S++VN SARVGSI DN LGGW+SYR SKSALN AT+ ++ EL+R+ W + HPGTT T LS+PF+ NV+ +LF +TV ++L +VD M++ SGG + + G+ +
Sbjct: 95 RNGDPNAVFVVNGSSRGIGLQFVKSLVDRSQGTILACCRSPDSADKLNEFLSSSPQASQRVKTIQLDVEDQASIDAAAEEIKTSYNRVDCLFNVAGILGDGKSDPGPERSLSKLDRDWVEKTMAVNVIGPVMLSQALAPMMISKXXXXXXXXXXXXXXXXRAQSVIVNLSARVGSISDNELGGWYSYRFSKSALNQATRTMAHELKRQGTWTVALHPGTTNTDLSKPFQRNVQEGRLFPVEFTVGRLLDVVDGMEDRHSGGLYDWSGTAL 364
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S3PXF5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXF5_9STRA) HSP 1 Score: 254 bits (648), Expect = 2.360e-76 Identity = 129/276 (46.74%), Postives = 182/276 (65.94%), Query Frame = 1
Query: 541 VNEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGES-SGNEERLDVVK-LDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRI 1362
++ A RN+D D V VTGA+RGIGL+I + L +T GT++A CR P A++L +S NE R ++K LD+ +Q ++E + + +D H+RVD+L+NVAGILGDGK TPGPERSLR +DR W ++ VN +GP+ L L P++ S K + K S++VN SARVGSI DN LGGW SYR SK+ALN A + ++ EL+R+ HPGTT+TGLS+PF+ NVK E+LF +T S+++ VDCMDE +GG + + G+ +
Sbjct: 81 ISSDADKRNNDADAVFVVTGASRGIGLQILKDLATRTKGTIVACCRAPKEADHLHSFIKSLPTNESRRILLKSLDLEEQETIETLGKEIEDSHKRVDVLYNVAGILGDGKNTPGPERSLRSLDRNWAMKSMNVNYIGPVSLSQVLAPMMRSTLKKDDRGK---------SVIVNLSARVGSISDNGLGGWISYRSSKAALNQANRTMAHELKRQGTLCICLHPGTTDTGLSKPFQGNVKKERLFPVEFTASRMIDAVDCMDELNTGGLYDWSGTAL 347
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: A0A7S3L7K7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7K7_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.430e-75 Identity = 123/279 (44.09%), Postives = 182/279 (65.23%), Query Frame = 1
Query: 538 VVNEQAKLRNSDPDMVAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPAT--RLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
+V+ +++ RN DP+ V VTGA+RGIGL+ + L KT G ++A CR P A L + + N R++V+ LD+ +Q+S+E ++ + RVD+L NVAG+LGD KTTPGPERSL +DR+W +L +N +GP+M+ L PLL ++ K T R ++V N SARVGSI DN +GGW+SYR+SK+ LN AT+ +++EL R+ VW + HPGTT+T LS+PF+ANVK E LF +TV+Q+L ++D + SGG + + G + +
Sbjct: 72 LVSMESEKRNQDPEAVFVVTGASRGIGLQFVKALTTKTQGKIVACCRKPEQATQLNEFIGTLPNPSRVEVIPLDLEEQSSIEAFGTRVRNTYNRVDILLNVAGLLGDSKTTPGPERSLARVDRKWFETSLAINLIGPVMVTQELVPLLGQ---RRRPRKDNDDGTKDRPAAVVANLSARVGSISDNRIGGWYSYRISKAGLNQATRTMALELGRQSVWCVALHPGTTDTDLSKPFQANVKKESLFPVDFTVNQLLSVIDSVHAEHSGGLYDWAGKSVSF 347
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Match: B7FYH7_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYH7_PHATC) HSP 1 Score: 247 bits (631), Expect = 4.880e-75 Identity = 119/262 (45.42%), Postives = 174/262 (66.41%), Query Frame = 1
Query: 583 VAFVTGANRGIGLEIARQLLEKTAGTVIAACRDPSSAENLRQLGESSGNEERLDVVKLDVTDQASVERVAEHAKDKHRRVDLLFNVAGILGDGKTTPGPERSLRVMDREWLRHTLEVNTVGPMMLVSALTPLLESPPIKKGKAKAGAPATRLPSIVVNFSARVGSIGDNNLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTETGLSEPFRANVKPEKLFTPAYTVSQVLGIVDCMDEHLSGGFFAFDGSRIEW 1368
V VTGA+RGIGL+ + L+ + G+++A CR P AE L++ + + R+ +V LD+ DQ S+ER K+ RVD+L NVAG+LGD KTTPGPERSL ++R+W TL +NT+GP+ML L+PL+ +K K+ TR +++ + SARVGSI DN LGGW+SYRMSKSALN AT+ +++E++R W + HPGTT+T LS+PF++NVK LF +T +++ ++D M E+ SGG + + G I +
Sbjct: 1 VFVVTGASRGIGLQFVKTLILRARGSIVACCRSPEKAELLQEFIATLEDPRRIRIVSLDLEDQTSIERAGAEIKEMFGRVDMLLNVAGLLGDAKTTPGPERSLAKVERDWFEKTLAINTIGPVMLSKELSPLMMQR--RKRKSSDNDTETRAVAVIASLSARVGSISDNGLGGWYSYRMSKSALNQATRTMALEMKRCSTWCIALHPGTTDTDLSKPFQSNVKDGSLFPVDFTTEKLMNVIDSMTENNSGGLYDWAGQAISF 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7673.15673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7673.15673.1 >prot_H-paniculata_contig7673.15673.1 ID=prot_H-paniculata_contig7673.15673.1|Name=mRNA_H-paniculata_contig7673.15673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=439bp MCNVHRMMIISKRGKRIAVTSAVKYPKVLMSVRLSLLNLFGLGSGGSSFMback to top mRNA from alignment at H-paniculata_contig7673:5924..8689+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7673.15673.1 ID=mRNA_H-paniculata_contig7673.15673.1|Name=mRNA_H-paniculata_contig7673.15673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2766bp|location=Sequence derived from alignment at H-paniculata_contig7673:5924..8689+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7673:5924..8689+ >mRNA_H-paniculata_contig7673.15673.1 ID=mRNA_H-paniculata_contig7673.15673.1|Name=mRNA_H-paniculata_contig7673.15673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2634bp|location=Sequence derived from alignment at H-paniculata_contig7673:5924..8689+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |