mRNA_H-paniculata_contig76719.15671.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig76719.15671.1
Unique NamemRNA_H-paniculata_contig76719.15671.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: E6ZEQ6_ECTSI (Ribosomal protein S4 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ6_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 4.710e-134
Identity = 185/188 (98.40%), Postives = 185/188 (98.40%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVL   KKIGHGGFVLQKGDFVEFCPTQRAAIRA
Sbjct:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLVNGKKIGHGGFVLQKGDFVEFCPTQRAAIRA 188
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: A0A089MX47_PETFA (Ribosomal protein S4 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089MX47_PETFA)

HSP 1 Score: 337 bits (865), Expect = 1.790e-115
Identity = 157/188 (83.51%), Postives = 172/188 (91.49%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR KN+YKSCLWSRTNIWGDLL+KE+TFLRPKWDS+IAILRSQKRRHRPL+NINRYRHPICHDYR+LKPR+R NQVFKYNR+GYRNTLSLLLCL+RFYGDL HK+FK FC   FKSKD S  LLS+LEGRLD+CLYRLGFFHSIYYSRQAILHNKVL   KKIGH GF+LQKGDFVEFC +QR AI+A
Sbjct:    1 MRFKNKYKSCLWSRTNIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNINRYRHPICHDYRYLKPRSRANQVFKYNRVGYRNTLSLLLCLRRFYGDLSHKSFKNFCHPAFKSKDPSQNLLSALEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCGFILQKGDFVEFCSSQRPAIKA 188
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: A0A0U1V7R9_9PHAE (Ribosomal protein S4 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1V7R9_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 2.420e-113
Identity = 154/188 (81.91%), Postives = 171/188 (90.96%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR KN+YKSCLWSRTNIWGDLL+KE+TFLRPKWDS+IAILRSQKRRHRPL+NI+RYRHPICHDY++LKPR+R NQVFKYNRIGYRNTLS+L CL+RFYGDL HK FK FC+   KSKD S  LL+SLEGRLD+CLYRLGFFHSIYYSRQAILHNKVL   KKIGH GFVLQKGD+VEFCP+QR AI+A
Sbjct:    1 MRFKNKYKSCLWSRTNIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNIDRYRHPICHDYKYLKPRSRANQVFKYNRIGYRNTLSILFCLRRFYGDLNHKMFKNFCKPALKSKDPSQMLLNSLEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCGFVLQKGDYVEFCPSQRGAIKA 188
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: A0A0U1V7B3_SCYLO (Ribosomal protein S4 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1V7B3_SCYLO)

HSP 1 Score: 327 bits (839), Expect = 1.630e-111
Identity = 151/187 (80.75%), Postives = 172/187 (91.98%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIR 561
            MR KN+YKSCLWSRT+IWGDLL+KE+TFLRPKWDS+IAILRSQKRRHRPL+NINRYRH +CH+Y+++KPR+R NQVFKYNR+GYRNTLSLL CL+RFYGDL HK+FK FC+  FKSKD S KLLS+LEGRLD+CLYRLGFFHSIYYSRQAILHNKVL   KKIGH  FVLQKGD+VEFCP+QR+AIR
Sbjct:    1 MRFKNKYKSCLWSRTDIWGDLLAKEETFLRPKWDSMIAILRSQKRRHRPLVNINRYRHRLCHNYKYIKPRSRANQVFKYNRVGYRNTLSLLFCLRRFYGDLSHKSFKNFCRPAFKSKDPSQKLLSALEGRLDICLYRLGFFHSIYYSRQAILHNKVLINGKKIGHCCFVLQKGDYVEFCPSQRSAIR 187
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: A0A3G5FPT6_9PHAE (Ribosomal protein S4 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPT6_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 3.810e-110
Identity = 152/188 (80.85%), Postives = 167/188 (88.83%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR KNRYKSCLWSRTNIWGDLL+KE TFLRPKWD+IIAILRSQ+RRHRPL+NI RYRHPICH+Y+ LKPRTR NQVFKYNR GYRNTLSL+ CL+RFYGDL HK FK FC+  FK +D S +LLSSLEGRLDM LYRLGFFHSIYYSRQAILHNKVL   +KIG+G F+LQKGD VEFCPTQR+AIRA
Sbjct:    1 MRFKNRYKSCLWSRTNIWGDLLAKEHTFLRPKWDTIIAILRSQRRRHRPLVNIYRYRHPICHNYKLLKPRTRANQVFKYNRFGYRNTLSLVFCLRRFYGDLSHKGFKNFCKPFFKLRDPSQRLLSSLEGRLDMSLYRLGFFHSIYYSRQAILHNKVLVNGEKIGYGSFILQKGDLVEFCPTQRSAIRA 188
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: A0A1I9LW85_9PHAE (Ribosomal protein S4 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW85_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 8.920e-109
Identity = 152/188 (80.85%), Postives = 165/188 (87.77%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR K RYKSCLWSRTNIWG+LLSKEKTFLRPKWD+II+ILRSQ+RRHRPL    RYRHPICHDY++L PR R NQVFKYNR GYRNTLSLL C++RFYGDL HK+FK FC+  FK KD SLKLL +LEGRLDMCLYRLGFFHSIYYS QAILHNKVL   KKIG+GGFVLQKGD+VEFCPTQR AIRA
Sbjct:    1 MRFKKRYKSCLWSRTNIWGNLLSKEKTFLRPKWDTIISILRSQRRRHRPLGKPKRYRHPICHDYKYLSPRLRSNQVFKYNRRGYRNTLSLLFCIRRFYGDLSHKSFKKFCRPFFKFKDPSLKLLGALEGRLDMCLYRLGFFHSIYYSGQAILHNKVLVNGKKIGYGGFVLQKGDYVEFCPTQREAIRA 188
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: W5RG02_COSCS (Ribosomal protein S4 n=9 Tax=Laminariales TaxID=2886 RepID=W5RG02_COSCS)

HSP 1 Score: 320 bits (821), Expect = 8.920e-109
Identity = 149/188 (79.26%), Postives = 166/188 (88.30%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR K+RYKSCLWSRT+IWGDLLSKEKTFLRPKWDSII +L SQKRRHRPL NINRYRHP+CHDY F+KPR RPNQ+FKYNR+ YRNTLSLLLC++RFYGDL HKAFK FCQ     K  + KL+ SLEGRLD+ LYRLGFFHSIYYSRQAILHNKVL   +KIG+GGF+LQKGDFVEFCP+QR+AIRA
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANINRYRHPLCHDYNFVKPRVRPNQIFKYNRLSYRNTLSLLLCIRRFYGDLSHKAFKRFCQPLVSLKTPAQKLIGSLEGRLDISLYRLGFFHSIYYSRQAILHNKVLVNGEKIGYGGFILQKGDFVEFCPSQRSAIRA 188
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BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: Q94Z19_PYLLI (Ribosomal protein S4 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z19_PYLLI)

HSP 1 Score: 320 bits (819), Expect = 1.800e-108
Identity = 147/188 (78.19%), Postives = 166/188 (88.30%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR K++YKSCLWSRTNIWGDLL+KE TFL PKWDS+IAILRSQKRRHRPL+NINRYRHPIC DY FL+PR+R NQVFKYNRIGYRNTLS + CL+RFYGDL HK+FK  CQ  FK K+ SL LL +LEGRLD+CLYRLGFFHSIYYSRQAI HNK++   KK+GH GFVL+KGD+VEFCPTQR+AIRA
Sbjct:    1 MRFKHKYKSCLWSRTNIWGDLLAKEHTFLSPKWDSMIAILRSQKRRHRPLVNINRYRHPICRDYHFLQPRSRSNQVFKYNRIGYRNTLSSIFCLRRFYGDLSHKSFKSLCQPSFKLKNPSLDLLGTLEGRLDICLYRLGFFHSIYYSRQAIQHNKIIVNGKKMGHSGFVLKKGDYVEFCPTQRSAIRA 188
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: A0A8F0K0K8_9PHAE (Ribosomal protein S4 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0K8_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 3.620e-108
Identity = 147/188 (78.19%), Postives = 167/188 (88.83%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR K+RYKSCLWSRT+IWGDLLSK+KTFLRPKWDSII +L SQKRRHRPL NINRYR+P+CHDY FLKPR RPNQ+FKYNRI YRNTLSLLLC++RFYGDL HKAFK FC+S    K+   KL+ +LEGRLD+ LYRLGFFHSIYYSRQAILH+KVL   K+IGHGGF+LQKGDFVEFCP+QR++IRA
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKDKTFLRPKWDSIIGVLSSQKRRHRPLANINRYRYPLCHDYNFLKPRVRPNQIFKYNRISYRNTLSLLLCIRRFYGDLNHKAFKNFCKSLVSLKNPPQKLIGALEGRLDVSLYRLGFFHSIYYSRQAILHSKVLVNGKRIGHGGFILQKGDFVEFCPSQRSSIRA 188
[Close]
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Match: S4S3Q3_LAMHY (Ribosomal protein S4 n=35 Tax=Laminariales TaxID=2886 RepID=S4S3Q3_LAMHY)

HSP 1 Score: 315 bits (808), Expect = 8.480e-107
Identity = 147/188 (78.19%), Postives = 163/188 (86.70%), Query Frame = 1 
Query:    1 MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPLININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGDLGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQAILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA 564
            MR K+RYKSCLWSRT+IWGDLLSKEKTFLRPKWDSII +L SQKRRHRPL NINRYRHP+CHDY FLKPR RPNQ FKYNRI YRNTLS+LL ++RFYGDL HKAFK FCQ     K+   KL+ +LEGRLD+ LYRLGFFHSIYYSRQ+I HNKVL   KKIGHGGF+LQKGD+VEFCP+QR+AIRA
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANINRYRHPLCHDYNFLKPRVRPNQTFKYNRISYRNTLSILLSIRRFYGDLSHKAFKRFCQPLVSLKNPPQKLIGALEGRLDISLYRLGFFHSIYYSRQSIFHNKVLVNGKKIGHGGFILQKGDYVEFCPSQRSAIRA 188
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig76719.15671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZEQ6_ECTSI4.710e-13498.40Ribosomal protein S4 n=2 Tax=Ectocarpus siliculosu... [more]
A0A089MX47_PETFA1.790e-11583.51Ribosomal protein S4 n=2 Tax=Scytosiphonaceae TaxI... [more]
A0A0U1V7R9_9PHAE2.420e-11381.91Ribosomal protein S4 n=1 Tax=Colpomenia peregrina ... [more]
A0A0U1V7B3_SCYLO1.630e-11180.75Ribosomal protein S4 n=1 Tax=Scytosiphon lomentari... [more]
A0A3G5FPT6_9PHAE3.810e-11080.85Ribosomal protein S4 n=1 Tax=Cladosiphon okamuranu... [more]
A0A1I9LW85_9PHAE8.920e-10980.85Ribosomal protein S4 n=1 Tax=Pleurocladia lacustri... [more]
W5RG02_COSCS8.920e-10979.26Ribosomal protein S4 n=9 Tax=Laminariales TaxID=28... [more]
Q94Z19_PYLLI1.800e-10878.19Ribosomal protein S4 n=1 Tax=Pylaiella littoralis ... [more]
A0A8F0K0K8_9PHAE3.620e-10878.19Ribosomal protein S4 n=3 Tax=Laminariales TaxID=28... [more]
S4S3Q3_LAMHY8.480e-10778.19Ribosomal protein S4 n=35 Tax=Laminariales TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig76719contigH-paniculata_contig76719:3..566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score62.4
Seed ortholog evalue2.6e-07
Seed eggNOG ortholog1123487.KB892835_gene3665
Preferred namerpsD
KEGG koko:K02986
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EggNOG OGs1MW0U@1224,2KUIJ@206389,2VGZH@28216,COG0522@1,COG0522@2
COG Functional cat.J
Best tax levelRhodocyclales
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons1
Model size564
Cds size564
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930948.6145291-CDS-H-paniculata_contig76719:2..5661622930948.6145291-CDS-H-paniculata_contig76719:2..566Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig76719 3..566 -
1691481523.7036245-CDS-H-paniculata_contig76719:2..5661691481523.7036245-CDS-H-paniculata_contig76719:2..566Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig76719 3..566 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig76719.15671.1prot_H-paniculata_contig76719.15671.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig76719 3..566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig76719.15671.1

>prot_H-paniculata_contig76719.15671.1 ID=prot_H-paniculata_contig76719.15671.1|Name=mRNA_H-paniculata_contig76719.15671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MRLKNRYKSCLWSRTNIWGDLLSKEKTFLRPKWDSIIAILRSQKRRHRPL
ININRYRHPICHDYRFLKPRTRPNQVFKYNRIGYRNTLSLLLCLKRFYGD
LGHKAFKGFCQSGFKSKDSSLKLLSSLEGRLDMCLYRLGFFHSIYYSRQA
ILHNKVLKKEKKIGHGGFVLQKGDFVEFCPTQRAAIRA
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mRNA from alignment at H-paniculata_contig76719:3..566-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig76719.15671.1 ID=mRNA_H-paniculata_contig76719.15671.1|Name=mRNA_H-paniculata_contig76719.15671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=564bp|location=Sequence derived from alignment at H-paniculata_contig76719:3..566- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGCTTAAAAATAGATATAAATCTTGTTTATGGTCGAGAACGAATAT
TTGGGGTGATCTTTTATCAAAAGAAAAAACTTTTCTTCGTCCTAAATGGG
ATAGTATAATAGCTATTTTACGAAGTCAAAAACGTCGCCATCGTCCTCTT
ATAAATATTAATAGATATCGTCATCCTATATGTCATGATTATAGATTCCT
TAAGCCACGTACAAGACCAAATCAAGTTTTTAAGTATAATCGTATAGGTT
ATCGTAACACTTTATCGCTATTGTTATGTCTTAAACGTTTTTATGGTGAT
TTAGGTCATAAAGCTTTTAAAGGCTTTTGTCAGTCTGGTTTCAAATCAAA
AGATTCTTCTTTAAAATTATTAAGCTCGCTTGAAGGCCGTTTAGATATGT
GTTTGTATCGATTAGGTTTTTTTCATTCAATTTATTATAGCCGTCAAGCC
ATTCTGCATAATAAAGTTTTAAAAAAAGAAAAAAAAATAGGACACGGGGG
GTTTGTGTTACAAAAGGGAGATTTTGTAGAATTTTGTCCGACGCAGCGAG
CTGCTATTAGAGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig76719:3..566-

>mRNA_H-paniculata_contig76719.15671.1 ID=mRNA_H-paniculata_contig76719.15671.1|Name=mRNA_H-paniculata_contig76719.15671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig76719:3..566- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGCTTAAAAATAGATATAAATCTTGTTTATGGTCGAGAACGAATAT
TTGGGGTGATCTTTTATCAAAAGAAAAAACTTTTCTTCGTCCTAAATGGG
ATAGTATAATAGCTATTTTACGAAGTCAAAAACGTCGCCATCGTCCTCTT
ATAAATATTAATAGATATCGTCATCCTATATGTCATGATTATAGATTCCT
TAAGCCACGTACAAGACCAAATCAAGTTTTTAAGTATAATCGTATAGGTT
ATCGTAACACTTTATCGCTATTGTTATGTCTTAAACGTTTTTATGGTGAT
TTAGGTCATAAAGCTTTTAAAGGCTTTTGTCAGTCTGGTTTCAAATCAAA
AGATTCTTCTTTAAAATTATTAAGCTCGCTTGAAGGCCGTTTAGATATGT
GTTTGTATCGATTAGGTTTTTTTCATTCAATTTATTATAGCCGTCAAGCC
ATTCTGCATAATAAAGTTTTAAAAAAAGAAAAAAAAATAGGACACGGGGG
GTTTGTGTTACAAAAGGGAGATTTTGTAGAATTTTGTCCGACGCAGCGAG
CTGCTATTAGAGCTATGAGGCTTAAAAATAGATATAAATCTTGTTTATGG
TCGAGAACGAATATTTGGGGTGATCTTTTATCAAAAGAAAAAACTTTTCT
TCGTCCTAAATGGGATAGTATAATAGCTATTTTACGAAGTCAAAAACGTC
GCCATCGTCCTCTTATAAATATTAATAGATATCGTCATCCTATATGTCAT
GATTATAGATTCCTTAAGCCACGTACAAGACCAAATCAAGTTTTTAAGTA
TAATCGTATAGGTTATCGTAACACTTTATCGCTATTGTTATGTCTTAAAC
GTTTTTATGGTGATTTAGGTCATAAAGCTTTTAAAGGCTTTTGTCAGTCT
GGTTTCAAATCAAAAGATTCTTCTTTAAAATTATTAAGCTCGCTTGAAGG
CCGTTTAGATATGTGTTTGTATCGATTAGGTTTTTTTCATTCAATTTATT
ATAGCCGTCAAGCCATTCTGCATAATAAAGTTTTAAAAAAAGAAAAAAAA
ATAGGACACGGGGGGTTTGTGTTACAAAAGGGAGATTTTGTAGAATTTTG
TCCGACGCAGCGAGCTGCTATTAGAGCT
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