mRNA_H-paniculata_contig7664.15663.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig7664.15663.1
Unique NamemRNA_H-paniculata_contig7664.15663.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 6.560e-81
Identity = 136/333 (40.84%), Postives = 204/333 (61.26%), Query Frame = 1
Query:  223 CYVQLGGVLLVSLASGGEGNDPSAMMTTRTQEESEQQDRQRKQCWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQE-CPRC--------PDWYLVKEFLNKPVRK---ADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRAN-KIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
            C + L  VL + + S G  +  +   T   Q   E +   +  CWVF+HMNKSGG TV+ M+ P++ ++G+ST L+D  +W  G  Y   ++ E    T+GGYTE LR +    CKWFTVFRHPVSR+VSAYFYC++   D LC + +  A +VDL+TFAEHW N+GLRQ+AL+ I  E V  ++   E C +         P WY  K +L+ P +        P+ G+ ++L  AQ  LS +YAAVGI+E++++++ LF+R L+    DW + FQ+ G KN+  +  + A   ALK AW   ++KK++ LD+LLY+HA++ H+ Q+A+ G+
Sbjct:    9 CIIPLQAVLGMVVISLGASSSIAMNSTNPVQGAQELKPTSKCDCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 6.290e-75
Identity = 127/300 (42.33%), Postives = 183/300 (61.00%), Query Frame = 1
Query:  370 MNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGA---GQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSI--TRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECP----------RCPDWYLVKEFLNKPVRKADKVPD--------------VGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
            MNK+GG TVK ML P+ + + ++ GLYD  QW +G  +  ++L + N++ WG YTE LRP G     +CKWFT+FRHP+ RLVSAYFYCK+ P D LC +      AD+ DL  FAEHW +FGLRQ+AL+ + PE+++A+K   +             CP WY +K +L + + + ++                   +   L+P Q +L+N+YAAVG+LEQ+ ++L LF+ AL  P  DW ETF   G KN+       E E L  +WTD ++++YL LDLLLY++AV+ H QQ+ +YGL
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 5.760e-67
Identity = 135/304 (44.41%), Postives = 181/304 (59.54%), Query Frame = 1
Query:  349 QCWVFTHMNKSGGQTVKGMLKPYIEDR-GISTGLYDWRQWGQGTPYISEYL------DEGNTITWGGYTEALR---PHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPDWYLVKEFLNKPVRK----------------ADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
            QCWVF H+ K GG TVK +L    EDR G    +YD  +W  G  + +++       D+ N +T GGYTEALR   P GAG C++FT+FRHP++R+VSAYFYC+   GD  C S + +A +VDL+TFA+HW NF LRQ+AL  +P + V      QE       Y +K +L +P ++                A   PD  +Y+ L+PA  ++ + Y AVGILEQ+N+TL LFD  LD P ++W E F E G  +    NK  E E L+ AWTD ++KKY+RLDLLLYEHAV    QQ   +GL
Sbjct:  176 QCWVFMHLQKCGGSTVKDLL----EDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMT-GGYTEALRLSEPVGAG-CRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDV------QE-------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 5.760e-67
Identity = 134/310 (43.23%), Postives = 174/310 (56.13%), Query Frame = 1
Query:  349 QCWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEY---LDEGNT--ITWGGYTEALR---PHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPD--------WYLVKEFLNKPVRKADKVP----------------DVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
            QCWVF H+ K GG TVK ML+      G    +YD  QW  G    + +   L  G T  +  GGYTEALR   P  AG C++FT+FRHP++R+VSAYFYC+ T GD  C S +  A +VDL+TFA+HW NF +RQ+AL  +P + V       E     D        WY +K +L +P +    VP                +  +Y  L+PA  ++ + Y AVGILEQ+N+TLHLFD AL+ P + W   F E G +     NK  E E LK AWTD ++KKY+RLDLLLYEHAV    +Q   YGL
Sbjct:  155 QCWVFMHLQKCGGSTVKYMLR---RSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAG-CRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 1.480e-58
Identity = 135/348 (38.79%), Postives = 178/348 (51.15%), Query Frame = 1
Query:  235 LGGVLLVSLASGGEGND--PSAMMTTRTQEES-----EQQDRQRKQCWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDE-----GNTITWGGYTEALRPHGAGQ-------CKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVM-----------ASKAAQECPRCPDWYLVKEFLNKPVRKADKV-PDVGMYKYL-EPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
            LGG LL+ L  GG      P      ++ +++     E   R   +CW+F H+ K+GG TVK +L    +  G  +  YD  QW +G  Y            G +   GGY EALR   A Q       C+WFTVFRHPVSRLVSAY+YC++ P D LC S    +  VDLVTFA HW NF LRQ+AL  +  +KV                A++    P WY++K FLN     AD   P+    +Y+  P   +L + YA VGILE +N+TL LFD ALD P + W E F+  G  N     K  + + L+ A +D +I K+L LDL LY  AV    QQ   YG+
Sbjct:   42 LGGGLLLCLLYGGHHAHVLPRPDAAEKSPQDAPALNIEDSPRSENRCWIFNHLQKAGGTTVKRLL---FDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 1.830e-57
Identity = 107/290 (36.90%), Postives = 164/290 (56.55%), Query Frame = 1
Query:  352 CWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQ-CKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPDWYLVKEFL------------NKPVRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
            CWV+T MNK+GG +++ M+K Y      + G +   Q+  G   + + LD   ++ WG YTE LRP+     CKWFT+ RHP++RLVSA+ YC   P D LC + I + ++ D+  FAEHW N G+ Q+AL+      ++ ++      + P WY  K +             +  +   D   +V M + L+P + +L +KYAAVGILEQ+ +++ LFD AL  P  +W+ T        N+  +K A+++ L  + TD  +K+ L LD+LLYEHA + HK QL+ YGL
Sbjct:   37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEV-----KSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSAS-STPRNVHDSK-AKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 5.830e-52
Identity = 106/293 (36.18%), Postives = 159/293 (54.27%), Query Frame = 1
Query:  352 CWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPDWYLVKEF----LNKPVRKA--------DKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEA-LKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGLEPD 1191
            CWVFTH NK+GG TVK  L+ Y E R  +  L     + +G   I + L++   +  GGY E LR      CKWFT+ RHP++RL+SA++YC     D LC ++I + ++ D+  FA+HW N+ L Q+AL ++   ++ A +        P W+  K +    L  P   +        D+   V +   L+P + +L + YAAVGILE +  ++ LFD AL+ P  +W  T     +      NKI E +A L  A TD  +++Y+ LDLLLYE+A + H++QL  Y L  D
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVD-----APAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNW--TVASASLSPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLALD 322          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 5.880e-47
Identity = 102/282 (36.17%), Postives = 155/282 (54.96%), Query Frame = 1
Query:  352 CWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPD-WYLVKEFLNKPVRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANK---IAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGLE 1185
            CW+F HM+KSG     G  +   E       ++D  QW +G  + ++ +     +  GG  E+LR H    CKW T+FRHP++RL+SAY +C + P D +C  +    +   LV FAE W NF +RQ+AL  + P  V    A ++       WYLVKE+L +     D+V    +   LEP + +LS +YAAVGI ++  +T+ LF +AL    LDWS ++   G+   ++ +    IAE E  + A  + +I   LRLD+ LYEHA+   K Q+A++G+E
Sbjct:  273 CWIFMHMDKSG---ASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEV----LESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 2.180e-42
Identity = 97/276 (35.14%), Postives = 147/276 (53.26%), Query Frame = 1
Query:  370 MNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPD-WYLVKEFLNKPVRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANK---IAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGLE 1185
            M+KSG     G  +   E       ++D  QW +G  + ++ +     +  GG  E+LR H    CKW T+FRHP++RL+SAY +C   P D +C  +    +   L  FAE W NF +RQ+AL+ + P  V    A ++       WYLVKE+L +     D+V    +   LEP + +LS +YAAVGI ++  +T+ LF +AL    LDWS ++   G+    + +    I E E  + A  + +I   LRLD+ LYEHAV   K Q+A++G+E
Sbjct:    1 MDKSG---ASGARRVATEQWRKDELVFDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEV----LGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265          
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 5.540e-40
Identity = 81/213 (38.03%), Postives = 122/213 (57.28%), Query Frame = 1
Query:  583 FRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECP----RCPDWYLVKEFLNKP---------VRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
            ++ P+ RLVSAYFYCKQ   D LC S + +A   DL TFA+HW N+GLRQ++L+ +  E V A++  +         P WY VKE+             +++     D+ M   L+P + +LS  Y+AVGILE++ +++ LF++AL  P  +W    +  G KN  +     E  AL+ AW D  + K L LD+ LY+HAVA H +Q+ E+G+
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JY77_9PHAE6.560e-8140.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS84_ECTSI6.290e-7542.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G716_ECTSI5.760e-6744.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWQ3_ECTSI5.760e-6743.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI1.480e-5838.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQY7_9PHAE1.830e-5736.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE5.830e-5236.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM0_9PHAE5.880e-4736.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI2.180e-4235.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L061_9PHAE5.540e-4038.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7664contigH-paniculata_contig7664:7698..11245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score237.3
Seed ortholog evalue1e-59
Seed eggNOG ortholog2880.D7FWQ3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1897
Cds size987
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7664.15663.1prot_H-paniculata_contig7664.15663.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig7664 9559..10545 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930947.5226705-UTR-H-paniculata_contig7664:7697..78861622930947.5226705-UTR-H-paniculata_contig7664:7697..7886Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7664 7698..7886 +
1691481523.1425679-UTR-H-paniculata_contig7664:7697..78861691481523.1425679-UTR-H-paniculata_contig7664:7697..7886Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7664 7698..7886 +
1622930947.5360162-UTR-H-paniculata_contig7664:9537..95581622930947.5360162-UTR-H-paniculata_contig7664:9537..9558Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7664 9538..9558 +
1691481523.153374-UTR-H-paniculata_contig7664:9537..95581691481523.153374-UTR-H-paniculata_contig7664:9537..9558Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7664 9538..9558 +
1622930947.5693986-UTR-H-paniculata_contig7664:10545..112451622930947.5693986-UTR-H-paniculata_contig7664:10545..11245Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7664 10546..11245 +
1691481523.1725266-UTR-H-paniculata_contig7664:10545..112451691481523.1725266-UTR-H-paniculata_contig7664:10545..11245Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig7664 10546..11245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930947.5549595-CDS-H-paniculata_contig7664:9558..105451622930947.5549595-CDS-H-paniculata_contig7664:9558..10545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7664 9559..10545 +
1691481523.161833-CDS-H-paniculata_contig7664:9558..105451691481523.161833-CDS-H-paniculata_contig7664:9558..10545Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig7664 9559..10545 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig7664.15663.1

>prot_H-paniculata_contig7664.15663.1 ID=prot_H-paniculata_contig7664.15663.1|Name=mRNA_H-paniculata_contig7664.15663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp
MRVPCYVQLGGVLLVSLASGGEGNDPSAMMTTRTQEESEQQDRQRKQCWV
FTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGN
TITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGS
SITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPDW
YLVKEFLNKPVRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTL
HLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKY
LRLDLLLYEHAVATHKQQLAEYGLEPDT*
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mRNA from alignment at H-paniculata_contig7664:7698..11245+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig7664.15663.1 ID=mRNA_H-paniculata_contig7664.15663.1|Name=mRNA_H-paniculata_contig7664.15663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3548bp|location=Sequence derived from alignment at H-paniculata_contig7664:7698..11245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAACTTGTCTACCACCATATACCCTAGACTTGATAGGACCCCCCCCTAC TTTTTGGTGGACGGGCCGTCTGCGAAGACCAGACTACAGCAGCTGTTGAG GGAGAGAAGGCTCCTTGCTTGATTACCTCGGCTGGAGAGGCGGGACGTAG CTACCCCTGTTGGTCGTAGGAAAGGACCCGACAGATCTGGTGCGTATGCA CATACGGTTTTGCTGATTTGGTTTGCAATATTTCCGATTAATGAAAAGTC TGGGTGGGTGTGTGCGGACACTCAACTGTTCTCTTTTGGTTTTGATTTCA AATGTGAACATGAGAGTGACCGTTTTATTCTCCCATTATGCGATGGTAGT GGACATTGGGACTCAAAAAACACGATGCAGTAAAGCGATTCCGTTGTAGT ACATTACACTCAACTCTGGGTGCATTAGGCGTTGGATTCGCCTGTACGAA TGTTCATTGTACATGCCTCTGTCTGTTATACTCATCCCTTTTTCCCACCG GCCCAGCATATCAAAAAGTATGTACTGACTGAACAATCTGTTTGACAGAT GATGACGTCTTTTGAACGTACCGACTGTGTAATATTTTTCCTGATTGTGT GTGGTACTGTGACAATTCGTAACAGACATGACGCCCTCTCAACAAACAGA AATGTCAGATGATTGGGTCTAGGGTAGCTTTCACTCGTCTTCAACCACGA CGTGTTTAGAGCTATGTCGCTACCGTCCTGGAATTGAAAGCAAATGGCCT CCGGAACTTCCGCGTCAAGATATCATTTTTCGCGCTGCTGTTGGACAAAC CACAAGTAGGAAATTCAAGGGTGGTACAATAACTCCCTGCTATGTGCGGT ACTTGCACATTGATGGAGTTACTATGCACTGCTGCCTGTATGAGGTATGC GACACGGTGATGTCCAAAGAGATGTGTTTTAGATGATCACAGGTAACCGC CAACCTATTCCCAGTTCTCTGCTGCCCTGGCAGTCGACGTCTCGGTGATC CTTCCCCAGAGCTCGACACAGTCAGTACGGCATCAAAAACCCATATATTT TGAATTATTCCAAATGGTGGTTAGCCCTGTTTCCTACTCGTAACAATAAA ATCGAAAGATCTCTGCCACTTGCGATTTACGGATACCGATGACTGATAAG CCCCCAGCCCACCGATCGTGTCGGATATTCACTGCAGAGCGATGGTGCAT AGTTATATCAAGTAGTAAAACGTCCACGCATGGTTATGGATGATGGTGAT CCTAAATCGTCCAGTTCTGGATAATAAGGGATTCACCCACCCGCCGACTC TACCCACCAATGACGAATATCCTAATTTCGGGGTGGCTCCAATGGCGCAC ACAGAGCGGATTCGTCGCAAACGATTTCCTGTCGAGAGTACGTTTCCCGA GTTTCCAAACGCCTGATGCCCAACACAATTCCCACATCTGTCGCGATGTC TCCAACGCATTCATCGCTAAACCTAAAGGCTGCATGCCCTGAACCCCCCC CTCCCAACGTTTCAGCCCTCGTCAAATACGTGTGTTTTGTTTTTTTATTT TCAGGGGTGTACGTTACCACGTACATATGTAATATCGAATAGAACTCGCA AATGAATTCCAAAAATAAAGGTGGACAACGCCTTGTTGCTGGAATTTACT AAGAATCGCGATTCGGCAAGTATTACTATTTTGTCCCAAATCGCTGAAAG CTTCGAAAGTATTACTGCAGGCGCCGTTTGCATGCTTGCTCATTTTGGGC GTCAAGTTCTGTAACCGTTGTCATGTAAGTACCTGCAGTTTTGGTTCCCC TCTTTTTTTGTCGTGCTCGTTTCCCATCCGGATCCCACAGACGCGTTCTG TTGAGCGCGATATGCGGGTCCCGTGCTATGTGCAGCTTGGCGGGGTTTTG TTGGTGTCTCTGGCGAGCGGAGGCGAGGGCAACGATCCATCGGCCATGAT GACAACAAGGACACAAGAAGAGTCAGAACAACAAGATCGACAACGAAAGC AATGCTGGGTGTTCACGCATATGAACAAGTCGGGGGGGCAGACCGTAAAG GGGATGCTGAAGCCGTACATCGAGGACCGGGGAATCTCCACGGGCCTGTA CGACTGGCGGCAGTGGGGCCAGGGCACCCCGTACATCAGCGAGTACTTAG ACGAGGGTAACACTATCACTTGGGGGGGCTATACGGAGGCGCTGCGGCCG CACGGCGCGGGGCAATGCAAGTGGTTCACGGTGTTCAGGCATCCAGTTTC TCGCCTGGTCTCCGCCTACTTTTACTGCAAGCAGACTCCCGGGGATCACC TATGCGGGTCGAGCATCACGCGGGCAGACGAGGTAGACCTGGTGACCTTT GCGGAGCACTGGACGAATTTCGGGCTGAGGCAGTATGCGCTGTCCTTGAT TCCCCCCGAAAAAGTGATGGCGTCCAAAGCGGCGCAGGAATGCCCGAGGT GCCCGGACTGGTACCTGGTCAAGGAGTTCCTGAACAAACCGGTCAGGAAG GCGGACAAGGTTCCGGATGTCGGGATGTACAAGTACTTGGAACCGGCCCA GGCGGTCCTCAGTAACAAGTACGCGGCGGTGGGGATTCTGGAGCAGTACA ACTCGACCCTCCACCTGTTCGACCGTGCCCTGGATTTCCCCGACTTGGAC TGGTCGGAGACTTTCCAGGAGTACGGCGTTAAGAATAACTTGCGTGCGAA TAAGATCGCGGAGCATGAGGCGCTTAAAATCGCGTGGACGGATCTCAAGA TCAAGAAATATTTGCGCCTCGACCTGTTGTTGTACGAGCACGCGGTGGCC ACGCACAAGCAGCAGCTCGCAGAGTATGGGCTGGAACCCGATACATAGAT TCGGCAGTGATTTAATAAAAATAAGCGTGAAGATGGTTAAGTTGTTCATG TCCGCTTTTTATTTTGGTCTGAAATTGTTGCGCTTAAAAACGTTTTGTGT AGGCAATTTTCAGTACTATTCGTTTTGGTTGTTACTTTTGTGGTGTATTC AAATCCATTCCTTGGGGTTGTTTGCTTGGAATCTGTGTTTTGTCACCTGT TTTTTTTTTCATTTATTTGGGGGGGTTTTGCCTGCTGCTTGCTTGCTAGC TTCTTCGTGATTTTTTTTTTGTTTTTTCAGCGTTCCTACATGCCCTGCTG AAGTAGTAGTCGCGTGGCTGACCGTTATTCACGAGTGGCGTTCCAGGCCG TGTATATCTTGACAGTACATTTAGTCTCGACTAATATTGTAACACATTCC GTATGTTATTCCTACTATTCCCTCTCCCCCCCCTATCTGCTGTTCGTGTT GTTGTTGTGGGTTGCTGCATGGTGAGGTTTGCGCTTGGAGTTATTTTTCT ATTGCAATCAACCCTTCGCTTCGCTTTTGATGTAAGCGGAGTTGCGCAGG TGGGAGCAGGTGTATCTGCATGGCGTGGTTTCTTGTCTAAACAGAGTGTT CGTGAGATGGAGAGTCTATTTTCAAGAAGAGAACGGGAGATATTTTGAAA CCGTCCTGCAGTCCACCGATCAAAATTTTAAGTCATCAATTTTGGAGT
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Coding sequence (CDS) from alignment at H-paniculata_contig7664:7698..11245+

>mRNA_H-paniculata_contig7664.15663.1 ID=mRNA_H-paniculata_contig7664.15663.1|Name=mRNA_H-paniculata_contig7664.15663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at H-paniculata_contig7664:7698..11245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGGTCCCGTGCTATGTGCAGCTTGGCGGGGTTTTGTTGGTGTCTCT
GGCGAGCGGAGGCGAGGGCAACGATCCATCGGCCATGATGACAACAAGGA
CACAAGAAGAGTCAGAACAACAAGATCGACAACGAAAGCAATGCTGGGTG
TTCACGCATATGAACAAGTCGGGGGGGCAGACCGTAAAGGGGATGCTGAA
GCCGTACATCGAGGACCGGGGAATCTCCACGGGCCTGTACGACTGGCGGC
AGTGGGGCCAGGGCACCCCGTACATCAGCGAGTACTTAGACGAGGGTAAC
ACTATCACTTGGGGGGGCTATACGGAGGCGCTGCGGCCGCACGGCGCGGG
GCAATGCAAGTGGTTCACGGTGTTCAGGCATCCAGTTTCTCGCCTGGTCT
CCGCCTACTTTTACTGCAAGCAGACTCCCGGGGATCACCTATGCGGGTCG
AGCATCACGCGGGCAGACGAGGTAGACCTGGTGACCTTTGCGGAGCACTG
GACGAATTTCGGGCTGAGGCAGTATGCGCTGTCCTTGATTCCCCCCGAAA
AAGTGATGGCGTCCAAAGCGGCGCAGGAATGCCCGAGGTGCCCGGACTGG
TACCTGGTCAAGGAGTTCCTGAACAAACCGGTCAGGAAGGCGGACAAGGT
TCCGGATGTCGGGATGTACAAGTACTTGGAACCGGCCCAGGCGGTCCTCA
GTAACAAGTACGCGGCGGTGGGGATTCTGGAGCAGTACAACTCGACCCTC
CACCTGTTCGACCGTGCCCTGGATTTCCCCGACTTGGACTGGTCGGAGAC
TTTCCAGGAGTACGGCGTTAAGAATAACTTGCGTGCGAATAAGATCGCGG
AGCATGAGGCGCTTAAAATCGCGTGGACGGATCTCAAGATCAAGAAATAT
TTGCGCCTCGACCTGTTGTTGTACGAGCACGCGGTGGCCACGCACAAGCA
GCAGCTCGCAGAGTATGGGCTGGAACCCGATACATAGATGCGGGTCCCGT
GCTATGTGCAGCTTGGCGGGGTTTTGTTGGTGTCTCTGGCGAGCGGAGGC
GAGGGCAACGATCCATCGGCCATGATGACAACAAGGACACAAGAAGAGTC
AGAACAACAAGATCGACAACGAAAGCAATGCTGGGTGTTCACGCATATGA
ACAAGTCGGGGGGGCAGACCGTAAAGGGGATGCTGAAGCCGTACATCGAG
GACCGGGGAATCTCCACGGGCCTGTACGACTGGCGGCAGTGGGGCCAGGG
CACCCCGTACATCAGCGAGTACTTAGACGAGGGTAACACTATCACTTGGG
GGGGCTATACGGAGGCGCTGCGGCCGCACGGCGCGGGGCAATGCAAGTGG
TTCACGGTGTTCAGGCATCCAGTTTCTCGCCTGGTCTCCGCCTACTTTTA
CTGCAAGCAGACTCCCGGGGATCACCTATGCGGGTCGAGCATCACGCGGG
CAGACGAGGTAGACCTGGTGACCTTTGCGGAGCACTGGACGAATTTCGGG
CTGAGGCAGTATGCGCTGTCCTTGATTCCCCCCGAAAAAGTGATGGCGTC
CAAAGCGGCGCAGGAATGCCCGAGGTGCCCGGACTGGTACCTGGTCAAGG
AGTTCCTGAACAAACCGGTCAGGAAGGCGGACAAGGTTCCGGATGTCGGG
ATGTACAAGTACTTGGAACCGGCCCAGGCGGTCCTCAGTAACAAGTACGC
GGCGGTGGGGATTCTGGAGCAGTACAACTCGACCCTCCACCTGTTCGACC
GTGCCCTGGATTTCCCCGACTTGGACTGGTCGGAGACTTTCCAGGAGTAC
GGCGTTAAGAATAACTTGCGTGCGAATAAGATCGCGGAGCATGAGGCGCT
TAAAATCGCGTGGACGGATCTCAAGATCAAGAAATATTTGCGCCTCGACC
TGTTGTTGTACGAGCACGCGGTGGCCACGCACAAGCAGCAGCTCGCAGAG
TATGGGCTGGAACCCGATACATAG
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