mRNA_H-paniculata_contig7664.15663.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 268 bits (685), Expect = 6.560e-81 Identity = 136/333 (40.84%), Postives = 204/333 (61.26%), Query Frame = 1
Query: 223 CYVQLGGVLLVSLASGGEGNDPSAMMTTRTQEESEQQDRQRKQCWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQE-CPRC--------PDWYLVKEFLNKPVRK---ADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRAN-KIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
C + L VL + + S G + + T Q E + + CWVF+HMNKSGG TV+ M+ P++ ++G+ST L+D +W G Y ++ E T+GGYTE LR + CKWFTVFRHPVSR+VSAYFYC++ D LC + + A +VDL+TFAEHW N+GLRQ+AL+ I E V ++ E C + P WY K +L+ P + P+ G+ ++L AQ LS +YAAVGI+E++++++ LF+R L+ DW + FQ+ G KN+ + + A ALK AW ++KK++ LD+LLY+HA++ H+ Q+A+ G+
Sbjct: 9 CIIPLQAVLGMVVISLGASSSIAMNSTNPVQGAQELKPTSKCDCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 251 bits (641), Expect = 6.290e-75 Identity = 127/300 (42.33%), Postives = 183/300 (61.00%), Query Frame = 1
Query: 370 MNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGA---GQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSI--TRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECP----------RCPDWYLVKEFLNKPVRKADKVPD--------------VGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
MNK+GG TVK ML P+ + + ++ GLYD QW +G + ++L + N++ WG YTE LRP G +CKWFT+FRHP+ RLVSAYFYCK+ P D LC + AD+ DL FAEHW +FGLRQ+AL+ + PE+++A+K + CP WY +K +L + + + ++ + L+P Q +L+N+YAAVG+LEQ+ ++L LF+ AL P DW ETF G KN+ E E L +WTD ++++YL LDLLLY++AV+ H QQ+ +YGL
Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 235 bits (600), Expect = 5.760e-67 Identity = 135/304 (44.41%), Postives = 181/304 (59.54%), Query Frame = 1
Query: 349 QCWVFTHMNKSGGQTVKGMLKPYIEDR-GISTGLYDWRQWGQGTPYISEYL------DEGNTITWGGYTEALR---PHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPDWYLVKEFLNKPVRK----------------ADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
QCWVF H+ K GG TVK +L EDR G +YD +W G + +++ D+ N +T GGYTEALR P GAG C++FT+FRHP++R+VSAYFYC+ GD C S + +A +VDL+TFA+HW NF LRQ+AL +P + V QE Y +K +L +P ++ A PD +Y+ L+PA ++ + Y AVGILEQ+N+TL LFD LD P ++W E F E G + NK E E L+ AWTD ++KKY+RLDLLLYEHAV QQ +GL
Sbjct: 176 QCWVFMHLQKCGGSTVKDLL----EDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMT-GGYTEALRLSEPVGAG-CRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDV------QE-------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 235 bits (600), Expect = 5.760e-67 Identity = 134/310 (43.23%), Postives = 174/310 (56.13%), Query Frame = 1
Query: 349 QCWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEY---LDEGNT--ITWGGYTEALR---PHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPD--------WYLVKEFLNKPVRKADKVP----------------DVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
QCWVF H+ K GG TVK ML+ G +YD QW G + + L G T + GGYTEALR P AG C++FT+FRHP++R+VSAYFYC+ T GD C S + A +VDL+TFA+HW NF +RQ+AL +P + V E D WY +K +L +P + VP + +Y L+PA ++ + Y AVGILEQ+N+TLHLFD AL+ P + W F E G + NK E E LK AWTD ++KKY+RLDLLLYEHAV +Q YGL
Sbjct: 155 QCWVFMHLQKCGGSTVKYMLR---RSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAG-CRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 211 bits (537), Expect = 1.480e-58 Identity = 135/348 (38.79%), Postives = 178/348 (51.15%), Query Frame = 1
Query: 235 LGGVLLVSLASGGEGND--PSAMMTTRTQEES-----EQQDRQRKQCWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDE-----GNTITWGGYTEALRPHGAGQ-------CKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVM-----------ASKAAQECPRCPDWYLVKEFLNKPVRKADKV-PDVGMYKYL-EPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
LGG LL+ L GG P ++ +++ E R +CW+F H+ K+GG TVK +L + G + YD QW +G Y G + GGY EALR A Q C+WFTVFRHPVSRLVSAY+YC++ P D LC S + VDLVTFA HW NF LRQ+AL + +KV A++ P WY++K FLN AD P+ +Y+ P +L + YA VGILE +N+TL LFD ALD P + W E F+ G N K + + L+ A +D +I K+L LDL LY AV QQ YG+
Sbjct: 42 LGGGLLLCLLYGGHHAHVLPRPDAAEKSPQDAPALNIEDSPRSENRCWIFNHLQKAGGTTVKRLL---FDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 206 bits (523), Expect = 1.830e-57 Identity = 107/290 (36.90%), Postives = 164/290 (56.55%), Query Frame = 1
Query: 352 CWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQ-CKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPDWYLVKEFL------------NKPVRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
CWV+T MNK+GG +++ M+K Y + G + Q+ G + + LD ++ WG YTE LRP+ CKWFT+ RHP++RLVSA+ YC P D LC + I + ++ D+ FAEHW N G+ Q+AL+ ++ ++ + P WY K + + + D +V M + L+P + +L +KYAAVGILEQ+ +++ LFD AL P +W+ T N+ +K A+++ L + TD +K+ L LD+LLYEHA + HK QL+ YGL
Sbjct: 37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEV-----KSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSAS-STPRNVHDSK-AKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 191 bits (485), Expect = 5.830e-52 Identity = 106/293 (36.18%), Postives = 159/293 (54.27%), Query Frame = 1
Query: 352 CWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPDWYLVKEF----LNKPVRKA--------DKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEA-LKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGLEPD 1191
CWVFTH NK+GG TVK L+ Y E R + L + +G I + L++ + GGY E LR CKWFT+ RHP++RL+SA++YC D LC ++I + ++ D+ FA+HW N+ L Q+AL ++ ++ A + P W+ K + L P + D+ V + L+P + +L + YAAVGILE + ++ LFD AL+ P +W T + NKI E +A L A TD +++Y+ LDLLLYE+A + H++QL Y L D
Sbjct: 37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVD-----APAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNW--TVASASLSPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLALD 322
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 183 bits (465), Expect = 5.880e-47 Identity = 102/282 (36.17%), Postives = 155/282 (54.96%), Query Frame = 1
Query: 352 CWVFTHMNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPD-WYLVKEFLNKPVRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANK---IAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGLE 1185
CW+F HM+KSG G + E ++D QW +G + ++ + + GG E+LR H CKW T+FRHP++RL+SAY +C + P D +C + + LV FAE W NF +RQ+AL + P V A ++ WYLVKE+L + D+V + LEP + +LS +YAAVGI ++ +T+ LF +AL LDWS ++ G+ ++ + IAE E + A + +I LRLD+ LYEHA+ K Q+A++G+E
Sbjct: 273 CWIFMHMDKSG---ASGARRVATERWRKDELVFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEV----LESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 163 bits (413), Expect = 2.180e-42 Identity = 97/276 (35.14%), Postives = 147/276 (53.26%), Query Frame = 1
Query: 370 MNKSGGQTVKGMLKPYIEDRGISTGLYDWRQWGQGTPYISEYLDEGNTITWGGYTEALRPHGAGQCKWFTVFRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECPRCPD-WYLVKEFLNKPVRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANK---IAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGLE 1185
M+KSG G + E ++D QW +G + ++ + + GG E+LR H CKW T+FRHP++RL+SAY +C P D +C + + L FAE W NF +RQ+AL+ + P V A ++ WYLVKE+L + D+V + LEP + +LS +YAAVGI ++ +T+ LF +AL LDWS ++ G+ + + I E E + A + +I LRLD+ LYEHAV K Q+A++G+E
Sbjct: 1 MDKSG---ASGARRVATEQWRKDELVFDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEV----LGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 155 bits (393), Expect = 5.540e-40 Identity = 81/213 (38.03%), Postives = 122/213 (57.28%), Query Frame = 1
Query: 583 FRHPVSRLVSAYFYCKQTPGDHLCGSSITRADEVDLVTFAEHWTNFGLRQYALSLIPPEKVMASKAAQECP----RCPDWYLVKEFLNKP---------VRKADKVPDVGMYKYLEPAQAVLSNKYAAVGILEQYNSTLHLFDRALDFPDLDWSETFQEYGVKNNLRANKIAEHEALKIAWTDLKIKKYLRLDLLLYEHAVATHKQQLAEYGL 1182
++ P+ RLVSAYFYCKQ D LC S + +A DL TFA+HW N+GLRQ++L+ + E V A++ + P WY VKE+ +++ D+ M L+P + +LS Y+AVGILE++ +++ LF++AL P +W + G KN + E AL+ AW D + K L LD+ LY+HAVA H +Q+ E+G+
Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7664.15663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig7664.15663.1 >prot_H-paniculata_contig7664.15663.1 ID=prot_H-paniculata_contig7664.15663.1|Name=mRNA_H-paniculata_contig7664.15663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp MRVPCYVQLGGVLLVSLASGGEGNDPSAMMTTRTQEESEQQDRQRKQCWVback to top mRNA from alignment at H-paniculata_contig7664:7698..11245+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig7664.15663.1 ID=mRNA_H-paniculata_contig7664.15663.1|Name=mRNA_H-paniculata_contig7664.15663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3548bp|location=Sequence derived from alignment at H-paniculata_contig7664:7698..11245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig7664:7698..11245+ >mRNA_H-paniculata_contig7664.15663.1 ID=mRNA_H-paniculata_contig7664.15663.1|Name=mRNA_H-paniculata_contig7664.15663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at H-paniculata_contig7664:7698..11245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |