prot_H-paniculata_contig750.15476.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig750.15476.1
Unique Nameprot_H-paniculata_contig750.15476.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig750.15476.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.050e-54
Identity = 102/144 (70.83%), Postives = 120/144 (83.33%), Query Frame = 0
Query:    1 TEVSKRLEIVFPAVLRASFVLFSVIYSYSVVGFAMYCATPLGIYELDPIA-------FAFYRHAISFASLHESIAAMTDVVMLSNWPIFMDAAGDVGNSVIARIFFYSFKGLTFYFVMPVMLGFIVQSYMAAKLPGTE-ANAQP 136
            +EV++RLE VFPAVLRASFVLFSV YSYSV+ F MYCATPLG+  +D +A       +A+Y+  +SFASLH+S AAMTD+VMLSNWP+FMDAAGDVGN V A+IFFYSFK LTFYFVMPVMLGFIVQSYMAA +PG + AN +P
Sbjct:  696 SEVARRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVLSFASLHQSFAAMTDIVMLSNWPLFMDAAGDVGNVVTAKIFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSANNKP 839          
BLAST of mRNA_H-paniculata_contig750.15476.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 2.360e-54
Identity = 102/144 (70.83%), Postives = 119/144 (82.64%), Query Frame = 0
Query:    1 TEVSKRLEIVFPAVLRASFVLFSVIYSYSVVGFAMYCATPLGIYELDPIA-------FAFYRHAISFASLHESIAAMTDVVMLSNWPIFMDAAGDVGNSVIARIFFYSFKGLTFYFVMPVMLGFIVQSYMAAKLPGTE-ANAQP 136
            +EV+ RLE VFPAVLRASFVLFSV YSYSV+ F MYCATPLG+  +D +A       +A+Y+  ISFASLH+S AAMTDV+MLSNWP+FMDAAGDVGN V A++FFYSFK LTFYFVMPVMLGFIVQSYMAA +PG + AN +P
Sbjct:  563 SEVATRLEFVFPAVLRASFVLFSVTYSYSVLAFDMYCATPLGVEPVDSVADHSMMQRWAYYKDVISFASLHQSFAAMTDVIMLSNWPLFMDAAGDVGNVVTAKLFFYSFKVLTFYFVMPVMLGFIVQSYMAAHIPGADSANNKP 706          
BLAST of mRNA_H-paniculata_contig750.15476.1 vs. uniprot
Match: D7FGS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS1_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.220e-38
Identity = 79/143 (55.24%), Postives = 103/143 (72.03%), Query Frame = 0
Query:    1 TEVSKRLEIVFPAVLRASFVLFSVIYSYSVVGFAMYCATPLGIYELDPIA-------FAFYRHAISFASLHESIAAMTDVVMLSNWPIFMDAAGDVGNSVIARIFFYSFKGLTFYFVMPVMLGFIVQSYMAAKLPGTEANAQP 136
            ++V+ RLE VFPAV+RASFVLF++ Y+Y+VV +AMYC+TPLG   +  +        FA  +   +FA+L  S A+M  VVM SNWP+FMDAAG VGN V+A++FFYSFK + FYFVMPV+LGFIV SYM A +P  E   +P
Sbjct:  208 SDVATRLEFVFPAVIRASFVLFALTYTYAVVAYAMYCSTPLGGEPIGDLKDDSMVKRFAAVKEVANFATLPRSYASMMYVVMFSNWPMFMDAAGVVGNLVVAKVFFYSFKAIGFYFVMPVLLGFIVTSYMNAHVPTVEDPPKP 350          
BLAST of mRNA_H-paniculata_contig750.15476.1 vs. uniprot
Match: A0A836CJH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.970e-7
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   54 YRHAISFASLHESIAAMTDVVMLSNWPIFMDAAGDVGNSVIARIFFYSFKGLTFYFVMPVMLGFIVQSYMAAKLPGTEANAQP 136
            Y   + + S  +S+ +M D ++L NW +FMDAA  V     A  FFY FK        PV+LGF+VQ++M A++P   A + P
Sbjct:   82 YSEVVGYESFGDSLLSMLDTLLLGNWTLFMDAAF-VAIGWPAWWFFYLFK--------PVLLGFVVQAWMGARVPAAAAPSPP 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig750.15476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L0T6_9PHAE1.050e-5470.83Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FR41_ECTSI2.360e-5470.83Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
D7FGS1_ECTSI1.220e-3855.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJH6_9STRA2.970e-738.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 3..127
e-value: 6.4E-6
score: 28.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..55
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 97..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig750contigH-paniculata_contig750:446..3765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig750.15476.1mRNA_H-paniculata_contig750.15476.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig750 446..3765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig750.15476.1 ID=prot_H-paniculata_contig750.15476.1|Name=mRNA_H-paniculata_contig750.15476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
TEVSKRLEIVFPAVLRASFVLFSVIYSYSVVGFAMYCATPLGIYELDPIA
FAFYRHAISFASLHESIAAMTDVVMLSNWPIFMDAAGDVGNSVIARIFFY
SFKGLTFYFVMPVMLGFIVQSYMAAKLPGTEANAQP
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