mRNA_H-paniculata_contig72700.15242.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A2K3JST4_TRIPR (Uncharacterized protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JST4_TRIPR) HSP 1 Score: 82.4 bits (202), Expect = 2.950e-18 Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 34 DADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQ------------SKGSSA----HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 279
D+D+A D++DRKST+GYVF + G +SW SKKQ + S A H R KHI+VR+H +R+ ++EG++ L Y ++ +Q+ADILTK L
Sbjct: 2 DSDYAGDLDDRKSTSGYVFLLSGAAVSWSSKKQPVVTLSTTEAEFIAAASCACQVLHGRSKHIDVRFHFLRDLTKEGVVELSYCKSDEQIADILTKPL 99
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 87.8 bits (216), Expect = 3.720e-18 Identity = 50/138 (36.23%), Postives = 65/138 (47.10%), Query Frame = 1
Query: 19 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 279
L G+VDADWA DV DR+S +GY F + GG +SW SKKQ + S+ H R KHI+VR+H +RE + G + L+YV TGDQ+AD+LTKGL
Sbjct: 983 LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGL 1120
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: UPI001BE4CD41 (secreted RxLR effector protein 161-like n=1 Tax=Anopheles merus TaxID=30066 RepID=UPI001BE4CD41) HSP 1 Score: 83.6 bits (205), Expect = 6.620e-18 Identity = 51/139 (36.69%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 19 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKG-----------SSAHC----------------------------------------RIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLS 282
LE F DADWA D+ DR+S TGYVF V GG +SW +KKQ + S+A C R+KH++VR IRE Q G +A++YV TG+Q+AD++TKGLS
Sbjct: 42 LEAFADADWANDLVDRRSITGYVFRVCGGAVSWLTKKQSTISLSSTEAELVALSTAVCHGVWLVRLLKELSMEPEGPVVYYEDNQSTIRVVEEERDTARLKHVDVRHRFIREEIQRGRVAVRYVPTGEQVADMMTKGLS 180
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: H3H839_PHYRM (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H839_PHYRM) HSP 1 Score: 86.7 bits (213), Expect = 9.380e-18 Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 16 GLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQS------------------------------------KGSSA-------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSRV 288
GL+G+ DADWA D+E R+ST+GY F + GG ISW SKKQ++ +GS A H R KHI++R+H +RE ++G + L+YV T D LAD++TK ++ V
Sbjct: 781 GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEALGEMASDEAVNIYEDHQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAV 914
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A2Z6NN11_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NN11_TRISU) HSP 1 Score: 86.7 bits (213), Expect = 9.440e-18 Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 19 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQ-------------------SKGSSAHCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLS 282
L G+ D++W DVEDRKST GY+F ISWCSKK+ +K AH R KHIE+R+H +RE G L L+Y ++G+Q+AD+ TK ++
Sbjct: 976 LMGYTDSNWCGDVEDRKSTAGYIFYFGEAPISWCSKKEPVVVLSSFTLKVDNVSAINLAKNPIAHGRSKHIEMRFHYLREQVNNGNLTLEYCKSGEQVADLFTKAVA 1082
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A182G3D4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3D4_AEDAL) HSP 1 Score: 83.2 bits (204), Expect = 1.240e-17 Identity = 48/141 (34.04%), Postives = 67/141 (47.52%), Query Frame = 1
Query: 19 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKG-SSAHC--------------------------------------------------RIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSRV 288
LEGF DADWA D+ DRKS +GYVF+V+G +SWC++KQ S SSA R+KH++VR+H ++ G + L YV + DQ+AD++TKGL R+
Sbjct: 59 LEGFADADWAGDIVDRKSLSGYVFKVRGATVSWCTRKQVSVALSSAEAEYASLTMAVTEAIWLRGLLRDLGQRVADPTIIHEDNQACIRVAESDKPTRRMKHVDVRFHFVKNEIDAGTVRLLYVPSEDQVADVMTKGLPRI 199
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 84.7 bits (208), Expect = 1.840e-17 Identity = 49/138 (35.51%), Postives = 64/138 (46.38%), Query Frame = 1
Query: 19 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 279
L G+VDADWA DV DR+S +GY F + GG ISW SKKQ + S+ H R KHI++R+H +RE + G + L+YV TGDQ+AD+L KGL
Sbjct: 177 LTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGL 314
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM) HSP 1 Score: 81.6 bits (200), Expect = 2.360e-17 Identity = 48/140 (34.29%), Postives = 68/140 (48.57%), Query Frame = 1
Query: 16 GLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQS---------------------------------------------KGSSA-------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 279
GL+G+ DADWA D+E R+ST+GY F + GG ISW SKKQ++ +GS A H R KHI++R+H +RE ++G + L+YV T D LAD++TK +
Sbjct: 24 GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAI 163
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 85.5 bits (210), Expect = 2.420e-17 Identity = 49/140 (35.00%), Postives = 65/140 (46.43%), Query Frame = 1
Query: 19 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSR 285
L G+VD+DWA D DR+S +GYVF + G ISW SKKQQS S+ H KHI+VR H +R+ ++G +A +Y+ T DQ+AD+LTKGLSR
Sbjct: 1253 LTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSR 1392
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9YHS6_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9YHS6_9AGAM) HSP 1 Score: 85.5 bits (210), Expect = 2.420e-17 Identity = 53/145 (36.55%), Postives = 66/145 (45.52%), Query Frame = 1
Query: 4 SNGHGLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSR 285
S G L + DADWA DV DR+S +GYVF + +SW SKKQ S S+ H R KHI+VR H +RE +EGIL L+YV TG+Q+AD+LTKGL R
Sbjct: 1268 SKGSELTCYTDADWASDVNDRRSISGYVFMMCRAAVSWSSKKQPSTALSSTEAEYIAGAHAAKEAIWMRGFLAELWQPRSGPTILLMDNQSAMAIARNPAFHARTKHIDVRHHFLREKVEEGILDLEYVPTGEQVADVLTKGLPR 1412 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig72700.15242.1 >prot_H-paniculata_contig72700.15242.1 ID=prot_H-paniculata_contig72700.15242.1|Name=mRNA_H-paniculata_contig72700.15242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp KSNGHGLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSback to top mRNA from alignment at H-paniculata_contig72700:26..316+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig72700.15242.1 ID=mRNA_H-paniculata_contig72700.15242.1|Name=mRNA_H-paniculata_contig72700.15242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=291bp|location=Sequence derived from alignment at H-paniculata_contig72700:26..316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig72700:26..316+ >mRNA_H-paniculata_contig72700.15242.1 ID=mRNA_H-paniculata_contig72700.15242.1|Name=mRNA_H-paniculata_contig72700.15242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at H-paniculata_contig72700:26..316+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |