prot_H-paniculata_contig72700.15242.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig72700.15242.1
Unique Nameprot_H-paniculata_contig72700.15242.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A2K3JST4_TRIPR (Uncharacterized protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JST4_TRIPR)

HSP 1 Score: 82.4 bits (202), Expect = 2.950e-18
Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   12 DADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQ------------SKGSSA----HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 93
            D+D+A D++DRKST+GYVF + G  +SW SKKQ             +  S A    H R KHI+VR+H +R+ ++EG++ L Y ++ +Q+ADILTK L
Sbjct:    2 DSDYAGDLDDRKSTSGYVFLLSGAAVSWSSKKQPVVTLSTTEAEFIAAASCACQVLHGRSKHIDVRFHFLRDLTKEGVVELSYCKSDEQIADILTKPL 99          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 87.8 bits (216), Expect = 3.720e-18
Identity = 50/138 (36.23%), Postives = 65/138 (47.10%), Query Frame = 0
Query:    7 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 93
            L G+VDADWA DV DR+S +GY F + GG +SW SKKQ +   S+                                                   H R KHI+VR+H +RE  + G + L+YV TGDQ+AD+LTKGL
Sbjct:  983 LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGL 1120          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: UPI001BE4CD41 (secreted RxLR effector protein 161-like n=1 Tax=Anopheles merus TaxID=30066 RepID=UPI001BE4CD41)

HSP 1 Score: 83.6 bits (205), Expect = 6.620e-18
Identity = 51/139 (36.69%), Postives = 67/139 (48.20%), Query Frame = 0
Query:    7 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKG-----------SSAHC----------------------------------------RIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLS 94
            LE F DADWA D+ DR+S TGYVF V GG +SW +KKQ +             S+A C                                        R+KH++VR   IRE  Q G +A++YV TG+Q+AD++TKGLS
Sbjct:   42 LEAFADADWANDLVDRRSITGYVFRVCGGAVSWLTKKQSTISLSSTEAELVALSTAVCHGVWLVRLLKELSMEPEGPVVYYEDNQSTIRVVEEERDTARLKHVDVRHRFIREEIQRGRVAVRYVPTGEQVADMMTKGLS 180          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: H3H839_PHYRM (Integrase catalytic domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H839_PHYRM)

HSP 1 Score: 86.7 bits (213), Expect = 9.380e-18
Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 0
Query:    6 GLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQS------------------------------------KGSSA-------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSRV 96
            GL+G+ DADWA D+E R+ST+GY F + GG ISW SKKQ++                                    +GS A       H R KHI++R+H +RE  ++G + L+YV T D LAD++TK ++ V
Sbjct:  781 GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEALGEMASDEAVNIYEDHQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAV 914          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A2Z6NN11_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NN11_TRISU)

HSP 1 Score: 86.7 bits (213), Expect = 9.440e-18
Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    7 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQ-------------------SKGSSAHCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLS 94
            L G+ D++W  DVEDRKST GY+F      ISWCSKK+                    +K   AH R KHIE+R+H +RE    G L L+Y ++G+Q+AD+ TK ++
Sbjct:  976 LMGYTDSNWCGDVEDRKSTAGYIFYFGEAPISWCSKKEPVVVLSSFTLKVDNVSAINLAKNPIAHGRSKHIEMRFHYLREQVNNGNLTLEYCKSGEQVADLFTKAVA 1082          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A182G3D4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G3D4_AEDAL)

HSP 1 Score: 83.2 bits (204), Expect = 1.240e-17
Identity = 48/141 (34.04%), Postives = 67/141 (47.52%), Query Frame = 0
Query:    7 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKG-SSAHC--------------------------------------------------RIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSRV 96
            LEGF DADWA D+ DRKS +GYVF+V+G  +SWC++KQ S   SSA                                                    R+KH++VR+H ++     G + L YV + DQ+AD++TKGL R+
Sbjct:   59 LEGFADADWAGDIVDRKSLSGYVFKVRGATVSWCTRKQVSVALSSAEAEYASLTMAVTEAIWLRGLLRDLGQRVADPTIIHEDNQACIRVAESDKPTRRMKHVDVRFHFVKNEIDAGTVRLLYVPSEDQVADVMTKGLPRI 199          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM)

HSP 1 Score: 84.7 bits (208), Expect = 1.840e-17
Identity = 49/138 (35.51%), Postives = 64/138 (46.38%), Query Frame = 0
Query:    7 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 93
            L G+VDADWA DV DR+S +GY F + GG ISW SKKQ +   S+                                                   H R KHI++R+H +RE  + G + L+YV TGDQ+AD+L KGL
Sbjct:  177 LTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGL 314          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM)

HSP 1 Score: 81.6 bits (200), Expect = 2.360e-17
Identity = 48/140 (34.29%), Postives = 68/140 (48.57%), Query Frame = 0
Query:    6 GLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQS---------------------------------------------KGSSA-------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGL 93
            GL+G+ DADWA D+E R+ST+GY F + GG ISW SKKQ++                                             +GS A       H R KHI++R+H +RE  ++G + L+YV T D LAD++TK +
Sbjct:   24 GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAI 163          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 85.5 bits (210), Expect = 2.420e-17
Identity = 49/140 (35.00%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    7 LEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSR 95
            L G+VD+DWA D  DR+S +GYVF + G  ISW SKKQQS   S+                                                   H   KHI+VR H +R+  ++G +A +Y+ T DQ+AD+LTKGLSR
Sbjct: 1253 LTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSR 1392          
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Match: A0A4Y9YHS6_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9YHS6_9AGAM)

HSP 1 Score: 85.5 bits (210), Expect = 2.420e-17
Identity = 53/145 (36.55%), Postives = 66/145 (45.52%), Query Frame = 0
Query:    2 SNGHGLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSSA---------------------------------------------------HCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSR 95
            S G  L  + DADWA DV DR+S +GYVF +    +SW SKKQ S   S+                                                   H R KHI+VR H +RE  +EGIL L+YV TG+Q+AD+LTKGL R
Sbjct: 1268 SKGSELTCYTDADWASDVNDRRSISGYVFMMCRAAVSWSSKKQPSTALSSTEAEYIAGAHAAKEAIWMRGFLAELWQPRSGPTILLMDNQSAMAIARNPAFHARTKHIDVRHHFLREKVEEGILDLEYVPTGEQVADVLTKGLPR 1412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig72700.15242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2K3JST4_TRIPR2.950e-1843.88Uncharacterized protein (Fragment) n=1 Tax=Trifoli... [more]
A0A4Y9ZY34_9AGAM3.720e-1836.23Integrase catalytic domain-containing protein n=1 ... [more]
UPI001BE4CD416.620e-1836.69secreted RxLR effector protein 161-like n=1 Tax=An... [more]
H3H839_PHYRM9.380e-1836.57Integrase catalytic domain-containing protein n=4 ... [more]
A0A2Z6NN11_TRISU9.440e-1841.12Integrase catalytic domain-containing protein n=1 ... [more]
A0A182G3D4_AEDAL1.240e-1734.04Uncharacterized protein n=1 Tax=Aedes albopictus T... [more]
A0A4Y9ZSL8_9AGAM1.840e-1735.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G5T8_PHYRM2.360e-1734.29Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A4Y9ZJA2_9AGAM2.420e-1735.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9YHS6_9AGAM2.420e-1736.55Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..46
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig72700contigH-paniculata_contig72700:26..316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig72700.15242.1mRNA_H-paniculata_contig72700.15242.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig72700 26..316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig72700.15242.1 ID=prot_H-paniculata_contig72700.15242.1|Name=mRNA_H-paniculata_contig72700.15242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
KSNGHGLEGFVDADWAEDVEDRKSTTGYVFEVKGGVISWCSKKQQSKGSS
AHCRIKHIEVRWHGIREWSQEGILALKYVQTGDQLADILTKGLSRV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like