prot_H-paniculata_contig1240.1513.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1240.1513.1
Unique Nameprot_H-paniculata_contig1240.1513.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length35
Homology
BLAST of mRNA_H-paniculata_contig1240.1513.1 vs. uniprot
Match: D7G2I9_ECTSI (Coiled-coil domain-containing protein 86 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 5.640e-11
Identity = 29/32 (90.62%), Postives = 32/32 (100.00%), Query Frame = 0
Query:    1 MSKKQLRQIKKRQVNSRTGEIEFVSPWGGGQK 32
            MSKKQLRQIKKRQ+NSRTGE+EFVSPWGGG+K
Sbjct:  232 MSKKQLRQIKKRQINSRTGEVEFVSPWGGGKK 263          
BLAST of mRNA_H-paniculata_contig1240.1513.1 vs. uniprot
Match: A0A7S2SQP8_9STRA (Coiled-coil domain-containing protein 86 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQP8_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 2.920e-6
Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 0
Query:    1 MSKKQLRQIKKRQVNSRTGEIEFVSPW 27
            M+KKQLRQIKK QVNSRTG++E VSPW
Sbjct:   87 MNKKQLRQIKKTQVNSRTGQVELVSPW 113          
BLAST of mRNA_H-paniculata_contig1240.1513.1 vs. uniprot
Match: A0A836C9I7_9STRA (Coiled-coil domain-containing protein 86 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I7_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 3.760e-6
Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 0
Query:    1 MSKKQLRQIKKRQVNSRTGEIEFVSPW 27
            MSKKQLRQIKK QVNS+TG++E VSPW
Sbjct:  102 MSKKQLRQIKKMQVNSKTGQVELVSPW 128          
BLAST of mRNA_H-paniculata_contig1240.1513.1 vs. uniprot
Match: A0A7S2SQR5_9STRA (Coiled-coil domain-containing protein 86 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQR5_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 8.720e-6
Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 0
Query:    1 MSKKQLRQIKKRQVNSRTGEIEFVSPW 27
            M+KKQLRQIKK QVNSRTG++E VSPW
Sbjct:  167 MNKKQLRQIKKTQVNSRTGQVELVSPW 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1240.1513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2I9_ECTSI5.640e-1190.63Coiled-coil domain-containing protein 86 n=2 Tax=E... [more]
A0A7S2SQP8_9STRA2.920e-681.48Coiled-coil domain-containing protein 86 n=1 Tax=R... [more]
A0A836C9I7_9STRA3.760e-681.48Coiled-coil domain-containing protein 86 (Fragment... [more]
A0A7S2SQR5_9STRA8.720e-681.48Coiled-coil domain-containing protein 86 n=1 Tax=R... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1240contigH-paniculata_contig1240:27755..27859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1240.1513.1mRNA_H-paniculata_contig1240.1513.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1240 27755..27886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1240.1513.1 ID=prot_H-paniculata_contig1240.1513.1|Name=mRNA_H-paniculata_contig1240.1513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=35bp
MSKKQLRQIKKRQVNSRTGEIEFVSPWGGGQKHK*
back to top