mRNA_H-paniculata_contig124.1507.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A6H5JQD1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE) HSP 1 Score: 460 bits (1183), Expect = 2.780e-154 Identity = 245/363 (67.49%), Postives = 280/363 (77.13%), Query Frame = 1 Query: 379 STIKLSTEALESIASLDDHPVEDNAAARADRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRDSALTLLLKNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMYDADGSDYRLRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPKSGGAWCGRADEVLQHAASPVALEKVLEVVVSLAPSCGDQFARLGVKQRLNTLTQQCRSSATVGSEAGEAEFHEELAQKFGEIAAALR 1467 S LSTEAL SIA LDDHP+EDN AARADRMLAALE+IPE ER M LD E +R+ PLA+RL +LQ LW VRQQEL+EAYDA+PKVNELLM RI++L D+++ AL ALTDLEDLLSDIDMARDFH++ GFP L SML S+ E VRE+AAW +GTAVKNEP HQLWVLEDG ++ S L LLL+N +AA T +LR+KVVY+LSA L+NN VQL FGS GEA LSAMYDADGSD R+R + L L+SDLL E ARGSPAAVLATMPVGST SGGAWC R DE LQHA SP ALEK +E V S PSC DQFA+L K+RL L QQCR+S G E E E+H+EL QK E A ALR Sbjct: 39 SPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRIKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEYHKELTQKLEECAVALR 401
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A835Z7K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.890e-34 Identity = 125/399 (31.33%), Postives = 187/399 (46.87%), Query Frame = 1 Query: 391 LSTEALESIASLDDHPVEDNAAARADRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDG-------------------------------------------------------AGTRD--SALTLLLKNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGG-----EAKLSAMYDADGSDYRLRTRILVLLSDLLNEGAR--GSPAAVLATMPVGSTPKSGGAWCGRADEVLQHAASP---VALEKVLEVVVSLAPSCGDQFARLGVKQRLNTLTQQCRSSA 1386 L +SI +DDHPV+D AR RML AL +P +E+ M LD + + ++R LQ LW RQ ELKE Y +P ++L + I +L++ S ++ LL AL DLED LSD+DMARDFH+L G+ L ++L+ + AVRE AAWVIGTAVKN W LE G AG D +A+ LL+ A + L+ K +Y+L+++L +NA+ Q F ++GG A +A D + L T+ + L+SD++ + A GS +A WC +L A + LE+ L+ + LAP CG + A + ++ RL + + ++A Sbjct: 91 LEKRTADSIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLDA--ILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILRSEASGDAVLLDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAADASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAGAGDGLNAIDRLLECVADARHAGLQGKALYALASALRHNARAQAHFVTTGGLDALRNAAATAADDGGAAARGLLTKAITLVSDIVADEAHEEGSGGGAVAAGVARDE-----RWCVLLHALLLRADAARGGTQLERALDAALVLAPLCGARPAGVALEARLAAMHTELGAAA 482
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7R9U9J5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.640e-24 Identity = 93/292 (31.85%), Postives = 145/292 (49.66%), Query Frame = 1 Query: 457 ARADRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLE----DGAGTRDSALTLLLKNGI--AAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMYDADGSDYRLRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPKSGGA----WCGRADEVLQHAASPVALEKVLEVVVSL 1302 A + M +L +P+ E G+ E+ T + ++ +W RQQ+L+EA +++ + + RI VL A DSSE ++ L LED L DIDMARDFH++ G+P LT +L S E VR AA V+G V+N P Q WV E A ++ + LL + + +A T+ ++K + +LS +L N+ + F G AKL A+ D D + RL R + ++SDL E A + + GG WC R +++ A +++ E V L Sbjct: 97 AGREMMKESLLKLPDAELARYGVTHAELSTPGAWED--RIDGIWQKRQQDLREAIESMGSHVNIFLERIMVLSAADSSEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSASTAKEQSKALSALSGALYNHVENLQLFADLDGSAKLLALLD-DAVEDRLSLRAIRIVSDLAFEAAESGDEELKGLL--------GGIFDARWCRRTEDLASAAKGAGTDDRLSEAVSQL 377
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S2RJU1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU1_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.550e-19 Identity = 73/206 (35.44%), Postives = 117/206 (56.80%), Query Frame = 1 Query: 574 LQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHS-LEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRD----------SALTLLLKNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMY--DADGS--DYRLRTRILVLLSDLLNE 1146 L+ LW RQ+ELK A +A+ + + L + I +++ D E ++ AL DLE+ LSD+DMARD H+ L G+P L +L+ Q+ +R AA VIGTA+KNEP Q W+LE A + D S+L +L+ + + + +Y+L+++L +N + Q AF GG +L A+ DG + L +++ L+ D+L E Sbjct: 121 LKVLWEQRQEELKAAMEAMQEAADTLSSIIRQIRSGD--EESVEAALADLEEHLSDVDMARDLHNALGGWPPLVRLLSSDQSPRIRAGAALVIGTAIKNEPVFQSWILESAAESVDVNPQQNETALSSLLGMLEEQGTGDVQVMHRRSMYALASALRHNLRNQAAFMELGGLERLQALLVKSCDGGLENPALVSKLAALVFDVLEE 324
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: W7TQS8_9STRA (Armadillo-like helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.290e-16 Identity = 107/351 (30.48%), Postives = 157/351 (44.73%), Query Frame = 1 Query: 457 ARADRMLAALEAIPEDERFHMGLDVEEMRTVP-----LAQRLVKLQE-------------LWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQ-TEAVREM---AAWVIGTAVKNEPSHQLWVLEDGAGTRDSALTLLL----KNGIAA-----ETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKL-----SAMYDADGSDYR-------LRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPKSGGAWCGRADEVLQHAASPVALEKVLEVVVSLAPSCGDQFARL--GVKQRLNTLTQQC 1374 +R ML L +P ER MG+D + + P L + +V+ +E LW RQ L +AY+ + K E L I VL+ + E ++ AL +LED LSD+DMA+DF++L G+P+L S L E RE+ AAWV+G AVKN+ Q WVLE G SALT LL + G A E L K VY+++++ N VQ GG L S++ + GS ++ L +++ DL E + AV A + V +L SP E +L ++ + G + AR GV + + L C Sbjct: 174 SRRGTMLKVLSGLPPQERASMGID-SLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLK--EGGEEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ----AVAAALEVAEARHPPSIXXXXXXXLLAGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDC 517
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: B7FVZ2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVZ2_PHATC) HSP 1 Score: 94.4 bits (233), Expect = 1.480e-16 Identity = 118/414 (28.50%), Postives = 170/414 (41.06%), Query Frame = 1 Query: 469 RMLAALEAIPEDERFHMG----LDVEEMRTVPLAQR---LVKLQELWNVRQQELKEAYDAIPK-VNELLMARIEVLQ---------ATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVL----------------------TSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRDSA---------------LTLLLKNGIAAETS----SLRNKVVYSLSASLSNNAQVQLAF-----GSSGGEAKLSAMY---DADGSDY---RLRTRILVLLSDLLNEGARGSPAAVLATMPVGS----------TPKSGGAWCGRADEVLQHAASPVALEKVLEVVVSLAPSCGDQFARLGVKQRLNTLTQQCRSSATVGSEAGEAEFHEELAQKFGEIAAALR*R 1473 +M L ++PEDE+ MG L + ++ QR ++ +LW RQ EL+E + +L RI LQ A D S+S ++ L DLED L D+DMARDFH+L G+PVL TS S +++ AAWV+GTAVKN W LE+ +S+ L L + + ETS L+ K +Y+L + L NA Q F G ++++ + D G +L R++ L +DLL E + A+ S T + WC L+ P E L VVV+LA C RL V++ L + +C T + + E FHEE A E LR R Sbjct: 130 KMHETLTSLPEDEQARMGGIPALPGSTLSSLTPEQREAFATRMAQLWEERQAELREFQAEFEADLPAILRTRIAQLQDYLRDPSADALDPSQSIIVSVLRDLEDQLVDLDMARDFHTLGGWPVLVALVTDDAHQPPFWQQSPNQTDTSTETASHVRSIQAHAAWVLGTAVKNTGEFAPWALEELTLGNESSIARQTIATTSTLRVVLDQFLASTLPQETSPALEQLQVKTLYALGSLLRGNALAQARFLRDYHGPDQLASRVNTLLATGDVRGVSRHTTKLTNRLMALATDLLAEANAVTSQPEHASAEPQSKQRFLSDELITSFTTQPWCSSLLTALEQ---PPLQETALTVVVALAAHCDWDDLRL-VEEVLVDIRAKCHGKDTGDNASPEDSFHEERASLASEALQLLRAR 539
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S2FHY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHY2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.570e-15 Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 472 MLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVK--LQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESA----LLLALTDLEDLLSDIDMARDFH-SLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLE 897 M+ L A+P E+ +G ++ + ++ L+ LW VRQ EL+EA A + + L A I+ L++ S SA +L AL LED LSD+DMARDFH +L G+P LT++L +Q+ VR AA V+GTAVKN+ Q W+LE Sbjct: 52 MIRTLSALPVVEQDRIGFTALMDKSKASGEEALEADLRSLWEVRQVELEEAMAATEESADFLAALIKTLKSHVDSNSADDETVLDALNGLEDHLSDMDMARDFHDALGGWPSLTNLLLPTQSLQVRAAAALVMGTAVKNQDEFQGWILE 200
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S1UMA0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMA0_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.740e-14 Identity = 72/242 (29.75%), Postives = 116/242 (47.93%), Query Frame = 1 Query: 493 IPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRD--------------SALTLLLKN-GIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMY----DADGSDYRLRTRILVLLSDLLNEGARGS 1161 +P+ E G+ E++T + V E+W RQ +LK A +++ + + + VLQ +S L+ L + + L D+D+A DFHS+ G+P++ ++L E VR AA VI +V+N P Q WV D G + +AL LL ++ T + K +++LSA+L N+ F GG AKLSA+ A D +L R + + +DL E A + Sbjct: 175 LPDSELSRYGISSAELQTEGAWEDRVA--EVWRKRQVDLKAAMESVADTHSIFTGYLGVLQDPAASAEELVAMLDVVAEQLMDVDLANDFHSMGGWPIVAALLAEEHPEGVRAAAAAVIADSVRNVPEFQGWVGVDKLGRLEVVGDDAGGDGSGEVTALDLLTDMFSSSSSTPKEQQKALFALSAALYNHPANLDKFLDLGGAAKLSAVLAPPEGAPKQDSKLIQRAINIAADLAFEAAESA 414
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7R9ZPY5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPY5_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.310e-13 Identity = 104/354 (29.38%), Postives = 153/354 (43.22%), Query Frame = 1 Query: 466 DRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLV--KLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALT-DLEDLLSDIDMARDFHSLEGFPVLTSML----------NLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRDSALTLLL---KNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMYD--ADGSDY-RLRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPK------SGGAWCGRADEVLQHAASPVALEKV---LEVVVSLAPSCG--DQFARLGVKQRL--NTLTQQCRSSATVGSEAGEAEFHEEL 1431 D M L +P++E+ G + P A+++ +L +W RQQEL E + E+L RI DLE LSDIDMARDFH+L G+P+L S+L N++ ++ AAW IGT VKN + +E LT+ L N E LR K +Y+L + L N QL F + A M++ A SD+ +L R+L L D++++ A L+ S + WC A ++ +P + V L+ +LAP C D+FA+ KQ L L + R A G A + E+ EEL Sbjct: 91 DMMHRTLSKLPQEEQDRFGGLPRKETMSPEARKIFEERLAAIWKQRQQELLELETI--DLPEVLKMRIRXXXXXXXXXXXXXXXXXEDLEYHLSDIDMARDFHTLGGWPLLVSLLRDDAHAVNATNVTNKLRIQRYAAWAIGTMVKNTGEFASYAVESVGQHNAMDLTMALLRQSNNDNDEQLRLREKAMYALGSMLRGNRLAQLQFCN----ANTHDMHELLASTSDHPKLMQRLLALAGDIVSDVAWDQEVEGLSAQQKQSQDSLITQCFASREWCDFAHRMMTMPQAPTSTPFVVTALQTTKALAPYCWKEDKFAK---KQTLLDGILNIRARWGADTG--AFDDEYLEEL 433
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S3M316_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 7.470e-12 Identity = 73/244 (29.92%), Postives = 107/244 (43.85%), Query Frame = 1 Query: 460 RADRMLAALEAIPEDERFHMGLDVEEMRTV--PLAQRLVKLQELWNVRQQELKEAYD-------------------AIPKVNELLM-----------------ARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAG-TRDSA------LTLLLK---------NGIAAETSSLRNKVVYSLSASLSNNAQVQ 1029 + + +L A +P E + +D+ + T P A+ L E W RQ ELK+A A+P V ++ + E Q D + + L LE LL D+D ARDFH++ G+P L S L SQ VR +AA +GTA+KN +QLW LE A T DS L LL++ IA++ L+ + +Y+LSA++ N VQ Sbjct: 96 KIEAILKAFHRLPGQELERLQIDLTQPVTAGTPEAELLF---EAWKRRQAELKDAMKNILNAAEYMTNITRTLNGTALPSVRYAMVHNTPIDVTLDLAPPGDASTTETKQVADLTTDDKVYLLRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTSENTAEEIASDRFELQKRALYALSAAMRGNMDVQ 336 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig124.1507.1 >prot_H-paniculata_contig124.1507.1 ID=prot_H-paniculata_contig124.1507.1|Name=mRNA_H-paniculata_contig124.1507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=413bp MDARCRTQALGILFLLVLAVMFVQLGSGASAADAKTGSAVAGEEKGYPDSback to top mRNA from alignment at H-paniculata_contig124:1855..5126+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig124.1507.1 ID=mRNA_H-paniculata_contig124.1507.1|Name=mRNA_H-paniculata_contig124.1507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3272bp|location=Sequence derived from alignment at H-paniculata_contig124:1855..5126+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig124:1855..5126+ >mRNA_H-paniculata_contig124.1507.1 ID=mRNA_H-paniculata_contig124.1507.1|Name=mRNA_H-paniculata_contig124.1507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2478bp|location=Sequence derived from alignment at H-paniculata_contig124:1855..5126+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |