mRNA_H-paniculata_contig124.1507.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig124.1507.1
Unique NamemRNA_H-paniculata_contig124.1507.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A6H5JQD1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQD1_9PHAE)

HSP 1 Score: 460 bits (1183), Expect = 2.780e-154
Identity = 245/363 (67.49%), Postives = 280/363 (77.13%), Query Frame = 1
Query:  379 STIKLSTEALESIASLDDHPVEDNAAARADRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRDSALTLLLKNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMYDADGSDYRLRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPKSGGAWCGRADEVLQHAASPVALEKVLEVVVSLAPSCGDQFARLGVKQRLNTLTQQCRSSATVGSEAGEAEFHEELAQKFGEIAAALR 1467
            S   LSTEAL SIA LDDHP+EDN AARADRMLAALE+IPE ER  M LD E +R+ PLA+RL +LQ LW VRQQEL+EAYDA+PKVNELLM RI++L   D+++ AL  ALTDLEDLLSDIDMARDFH++ GFP L SML  S+ E VRE+AAW +GTAVKNEP HQLWVLEDG  ++ S L LLL+N +AA T +LR+KVVY+LSA L+NN  VQL FGS  GEA LSAMYDADGSD R+R + L L+SDLL E ARGSPAAVLATMPVGST  SGGAWC R DE LQHA SP ALEK +E V S  PSC DQFA+L  K+RL  L QQCR+S   G E  E E+H+EL QK  E A ALR
Sbjct:   39 SPFDLSTEALASIADLDDHPIEDNDAARADRMLAALESIPEGERQGMDLDAEALRSKPLAERLAELQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWVLEDGPDSQPSVLALLLENAMAATTPTLRSKVVYALSACLTNNGDVQLQFGSRMGEAVLSAMYDADGSDRRVRIKTLTLMSDLLQEAARGSPAAVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSCRDQFAQLDTKRRLEGLAQQCRTSPPEGFEVAEEEYHKELTQKLEECAVALR 401          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A835Z7K3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K3_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.890e-34
Identity = 125/399 (31.33%), Postives = 187/399 (46.87%), Query Frame = 1
Query:  391 LSTEALESIASLDDHPVEDNAAARADRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDG-------------------------------------------------------AGTRD--SALTLLLKNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGG-----EAKLSAMYDADGSDYRLRTRILVLLSDLLNEGAR--GSPAAVLATMPVGSTPKSGGAWCGRADEVLQHAASP---VALEKVLEVVVSLAPSCGDQFARLGVKQRLNTLTQQCRSSA 1386
            L     +SI  +DDHPV+D   AR  RML AL  +P +E+  M LD   +  +  ++R   LQ LW  RQ ELKE Y  +P   ++L + I +L++  S ++ LL AL DLED LSD+DMARDFH+L G+  L ++L+  +  AVRE AAWVIGTAVKN      W LE G                                                       AG  D  +A+  LL+    A  + L+ K +Y+L+++L +NA+ Q  F ++GG      A  +A  D   +   L T+ + L+SD++ + A   GS    +A             WC     +L  A +      LE+ L+  + LAP CG + A + ++ RL  +  +  ++A
Sbjct:   91 LEKRTADSIRGIDDHPVQDTPEARTQRMLEALLELPREEQERMQLDA--ILALDPSERPPALQALWERRQAELKEIYAGMPTPAKILGSLIAILRSEASGDAVLLDALLDLEDHLSDVDMARDFHTLGGWHPLQALLHAERAPAVREHAAWVIGTAVKNVIEFHGWALETGPAAAADASESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVAGAGDGLNAIDRLLECVADARHAGLQGKALYALASALRHNARAQAHFVTTGGLDALRNAAATAADDGGAAARGLLTKAITLVSDIVADEAHEEGSGGGAVAAGVARDE-----RWCVLLHALLLRADAARGGTQLERALDAALVLAPLCGARPAGVALEARLAAMHTELGAAA 482          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7R9U9J5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9J5_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.640e-24
Identity = 93/292 (31.85%), Postives = 145/292 (49.66%), Query Frame = 1
Query:  457 ARADRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLE----DGAGTRDSALTLLLKNGI--AAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMYDADGSDYRLRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPKSGGA----WCGRADEVLQHAASPVALEKVLEVVVSL 1302
            A  + M  +L  +P+ E    G+   E+ T    +   ++  +W  RQQ+L+EA +++     + + RI VL A DSSE  ++  L  LED L DIDMARDFH++ G+P LT +L  S  E VR  AA V+G  V+N P  Q WV E      A   ++ +  LL + +  +A T+  ++K + +LS +L N+ +    F    G AKL A+ D D  + RL  R + ++SDL  E A      +   +        GG     WC R +++   A      +++ E V  L
Sbjct:   97 AGREMMKESLLKLPDAELARYGVTHAELSTPGAWED--RIDGIWQKRQQDLREAIESMGSHVNIFLERIMVLSAADSSEEDVMKVLLQLEDDLMDIDMARDFHTVGGWPALTGLLADSHAEDVRCQAALVVGNTVRNTPEFQAWVSEVPMGSAADVEEATMMHLLVSMMNSSASTAKEQSKALSALSGALYNHVENLQLFADLDGSAKLLALLD-DAVEDRLSLRAIRIVSDLAFEAAESGDEELKGLL--------GGIFDARWCRRTEDLASAAKGAGTDDRLSEAVSQL 377          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S2RJU1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJU1_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.550e-19
Identity = 73/206 (35.44%), Postives = 117/206 (56.80%), Query Frame = 1
Query:  574 LQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHS-LEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRD----------SALTLLLKNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMY--DADGS--DYRLRTRILVLLSDLLNE 1146
            L+ LW  RQ+ELK A +A+ +  + L + I  +++ D  E ++  AL DLE+ LSD+DMARD H+ L G+P L  +L+  Q+  +R  AA VIGTA+KNEP  Q W+LE  A + D          S+L  +L+     +   +  + +Y+L+++L +N + Q AF   GG  +L A+     DG   +  L +++  L+ D+L E
Sbjct:  121 LKVLWEQRQEELKAAMEAMQEAADTLSSIIRQIRSGD--EESVEAALADLEEHLSDVDMARDLHNALGGWPPLVRLLSSDQSPRIRAGAALVIGTAIKNEPVFQSWILESAAESVDVNPQQNETALSSLLGMLEEQGTGDVQVMHRRSMYALASALRHNLRNQAAFMELGGLERLQALLVKSCDGGLENPALVSKLAALVFDVLEE 324          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: W7TQS8_9STRA (Armadillo-like helical n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.290e-16
Identity = 107/351 (30.48%), Postives = 157/351 (44.73%), Query Frame = 1
Query:  457 ARADRMLAALEAIPEDERFHMGLDVEEMRTVP-----LAQRLVKLQE-------------LWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQ-TEAVREM---AAWVIGTAVKNEPSHQLWVLEDGAGTRDSALTLLL----KNGIAA-----ETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKL-----SAMYDADGSDYR-------LRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPKSGGAWCGRADEVLQHAASPVALEKVLEVVVSLAPSCGDQFARL--GVKQRLNTLTQQC 1374
            +R   ML  L  +P  ER  MG+D   + + P     L + +V+ +E             LW  RQ  L +AY+ + K  E L   I VL+  +  E  ++ AL +LED LSD+DMA+DF++L G+P+L S L      E  RE+   AAWV+G AVKN+   Q WVLE G     SALT LL    + G  A     E   L  K VY+++++   N  VQ      GG   L     S++  + GS ++       L  +++    DL  E  +    AV A + V                +L    SP   E +L ++  +    G + AR   GV + +  L   C
Sbjct:  174 SRRGTMLKVLSGLPPQERASMGID-SLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLK--EGGEEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALTRLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQ----AVAAALEVAEARHPPSIXXXXXXXLLAGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDC 517          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: B7FVZ2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FVZ2_PHATC)

HSP 1 Score: 94.4 bits (233), Expect = 1.480e-16
Identity = 118/414 (28.50%), Postives = 170/414 (41.06%), Query Frame = 1
Query:  469 RMLAALEAIPEDERFHMG----LDVEEMRTVPLAQR---LVKLQELWNVRQQELKEAYDAIPK-VNELLMARIEVLQ---------ATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVL----------------------TSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRDSA---------------LTLLLKNGIAAETS----SLRNKVVYSLSASLSNNAQVQLAF-----GSSGGEAKLSAMY---DADGSDY---RLRTRILVLLSDLLNEGARGSPAAVLATMPVGS----------TPKSGGAWCGRADEVLQHAASPVALEKVLEVVVSLAPSCGDQFARLGVKQRLNTLTQQCRSSATVGSEAGEAEFHEELAQKFGEIAAALR*R 1473
            +M   L ++PEDE+  MG    L    + ++   QR     ++ +LW  RQ EL+E        +  +L  RI  LQ         A D S+S ++  L DLED L D+DMARDFH+L G+PVL                      TS    S   +++  AAWV+GTAVKN      W LE+     +S+               L   L + +  ETS     L+ K +Y+L + L  NA  Q  F     G     ++++ +    D  G      +L  R++ L +DLL E    +     A+    S          T  +   WC      L+    P   E  L VVV+LA  C     RL V++ L  +  +C    T  + + E  FHEE A    E    LR R
Sbjct:  130 KMHETLTSLPEDEQARMGGIPALPGSTLSSLTPEQREAFATRMAQLWEERQAELREFQAEFEADLPAILRTRIAQLQDYLRDPSADALDPSQSIIVSVLRDLEDQLVDLDMARDFHTLGGWPVLVALVTDDAHQPPFWQQSPNQTDTSTETASHVRSIQAHAAWVLGTAVKNTGEFAPWALEELTLGNESSIARQTIATTSTLRVVLDQFLASTLPQETSPALEQLQVKTLYALGSLLRGNALAQARFLRDYHGPDQLASRVNTLLATGDVRGVSRHTTKLTNRLMALATDLLAEANAVTSQPEHASAEPQSKQRFLSDELITSFTTQPWCSSLLTALEQ---PPLQETALTVVVALAAHCDWDDLRL-VEEVLVDIRAKCHGKDTGDNASPEDSFHEERASLASEALQLLRAR 539          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S2FHY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHY2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.570e-15
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 1
Query:  472 MLAALEAIPEDERFHMGLDVEEMRTVPLAQRLVK--LQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESA----LLLALTDLEDLLSDIDMARDFH-SLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLE 897
            M+  L A+P  E+  +G      ++    +  ++  L+ LW VRQ EL+EA  A  +  + L A I+ L++   S SA    +L AL  LED LSD+DMARDFH +L G+P LT++L  +Q+  VR  AA V+GTAVKN+   Q W+LE
Sbjct:   52 MIRTLSALPVVEQDRIGFTALMDKSKASGEEALEADLRSLWEVRQVELEEAMAATEESADFLAALIKTLKSHVDSNSADDETVLDALNGLEDHLSDMDMARDFHDALGGWPSLTNLLLPTQSLQVRAAAALVMGTAVKNQDEFQGWILE 200          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S1UMA0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMA0_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.740e-14
Identity = 72/242 (29.75%), Postives = 116/242 (47.93%), Query Frame = 1
Query:  493 IPEDERFHMGLDVEEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRD--------------SALTLLLKN-GIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMY----DADGSDYRLRTRILVLLSDLLNEGARGS 1161
            +P+ E    G+   E++T    +  V   E+W  RQ +LK A +++   + +    + VLQ   +S   L+  L  + + L D+D+A DFHS+ G+P++ ++L     E VR  AA VI  +V+N P  Q WV  D  G  +              +AL LL      ++ T   + K +++LSA+L N+      F   GG AKLSA+      A   D +L  R + + +DL  E A  +
Sbjct:  175 LPDSELSRYGISSAELQTEGAWEDRVA--EVWRKRQVDLKAAMESVADTHSIFTGYLGVLQDPAASAEELVAMLDVVAEQLMDVDLANDFHSMGGWPIVAALLAEEHPEGVRAAAAAVIADSVRNVPEFQGWVGVDKLGRLEVVGDDAGGDGSGEVTALDLLTDMFSSSSSTPKEQQKALFALSAALYNHPANLDKFLDLGGAAKLSAVLAPPEGAPKQDSKLIQRAINIAADLAFEAAESA 414          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7R9ZPY5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPY5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.310e-13
Identity = 104/354 (29.38%), Postives = 153/354 (43.22%), Query Frame = 1
Query:  466 DRMLAALEAIPEDERFHMGLDVEEMRTVPLAQRLV--KLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQATDSSESALLLALT-DLEDLLSDIDMARDFHSLEGFPVLTSML----------NLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAGTRDSALTLLL---KNGIAAETSSLRNKVVYSLSASLSNNAQVQLAFGSSGGEAKLSAMYD--ADGSDY-RLRTRILVLLSDLLNEGARGSPAAVLATMPVGSTPK------SGGAWCGRADEVLQHAASPVALEKV---LEVVVSLAPSCG--DQFARLGVKQRL--NTLTQQCRSSATVGSEAGEAEFHEEL 1431
            D M   L  +P++E+   G    +    P A+++   +L  +W  RQQEL E       + E+L  RI                   DLE  LSDIDMARDFH+L G+P+L S+L          N++    ++  AAW IGT VKN      + +E         LT+ L    N    E   LR K +Y+L + L  N   QL F +    A    M++  A  SD+ +L  R+L L  D++++ A       L+     S         +   WC  A  ++    +P +   V   L+   +LAP C   D+FA+   KQ L    L  + R  A  G  A + E+ EEL
Sbjct:   91 DMMHRTLSKLPQEEQDRFGGLPRKETMSPEARKIFEERLAAIWKQRQQELLELETI--DLPEVLKMRIRXXXXXXXXXXXXXXXXXEDLEYHLSDIDMARDFHTLGGWPLLVSLLRDDAHAVNATNVTNKLRIQRYAAWAIGTMVKNTGEFASYAVESVGQHNAMDLTMALLRQSNNDNDEQLRLREKAMYALGSMLRGNRLAQLQFCN----ANTHDMHELLASTSDHPKLMQRLLALAGDIVSDVAWDQEVEGLSAQQKQSQDSLITQCFASREWCDFAHRMMTMPQAPTSTPFVVTALQTTKALAPYCWKEDKFAK---KQTLLDGILNIRARWGADTG--AFDDEYLEEL 433          
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Match: A0A7S3M316_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M316_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.470e-12
Identity = 73/244 (29.92%), Postives = 107/244 (43.85%), Query Frame = 1
Query:  460 RADRMLAALEAIPEDERFHMGLDVEEMRTV--PLAQRLVKLQELWNVRQQELKEAYD-------------------AIPKVNELLM-----------------ARIEVLQATDSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVREMAAWVIGTAVKNEPSHQLWVLEDGAG-TRDSA------LTLLLK---------NGIAAETSSLRNKVVYSLSASLSNNAQVQ 1029
            + + +L A   +P  E   + +D+ +  T   P A+ L    E W  RQ ELK+A                     A+P V   ++                 +  E  Q  D +    +  L  LE LL D+D ARDFH++ G+P L S L  SQ   VR +AA  +GTA+KN   +QLW LE  A  T DS       L LL++           IA++   L+ + +Y+LSA++  N  VQ
Sbjct:   96 KIEAILKAFHRLPGQELERLQIDLTQPVTAGTPEAELLF---EAWKRRQAELKDAMKNILNAAEYMTNITRTLNGTALPSVRYAMVHNTPIDVTLDLAPPGDASTTETKQVADLTTDDKVYLLRQLESLLDDVDNARDFHTIGGWPTLLSHLKASQPLQVRSVAALAVGTAIKNTYDYQLWTLESPASSTTDSGALVVSGLDLLIEALGTSENTAEEIASDRFELQKRALYALSAAMRGNMDVQ 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig124.1507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQD1_9PHAE2.780e-15467.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7K3_9STRA3.890e-3431.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U9J5_9STRA2.640e-2431.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2RJU1_9STRA2.550e-1935.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TQS8_9STRA1.290e-1630.48Armadillo-like helical n=2 Tax=Monodopsidaceae Tax... [more]
B7FVZ2_PHATC1.480e-1628.50Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2FHY2_9STRA2.570e-1541.61Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S1UMA0_9STRA3.740e-1429.75Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9ZPY5_9STRA6.310e-1329.38Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3M316_9STRA7.470e-1229.92Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig124contigH-paniculata_contig124:1855..5126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score461.8
Seed ortholog evalue3.3e-127
Seed eggNOG ortholog2880.D7FW70
KEGG koko:K14001,ko:K15196
KEGG Pathwayko04141,map04141
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.adenyl-nucleotide exchange factor activity
EggNOG OGsCOG0197@1,KOG2160@2759
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-01_003620.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03029
Exons3
Model size1977
Cds size1239
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig124.1507.1prot_H-paniculata_contig124.1507.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig124 2086..4619 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928959.4350698-UTR-H-paniculata_contig124:1854..20851622928959.4350698-UTR-H-paniculata_contig124:1854..2085Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig124 1855..2085 +
1691480682.2836132-UTR-H-paniculata_contig124:1854..20851691480682.2836132-UTR-H-paniculata_contig124:1854..2085Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig124 1855..2085 +
1622928959.5393362-UTR-H-paniculata_contig124:4619..51261622928959.5393362-UTR-H-paniculata_contig124:4619..5126Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig124 4620..5126 +
1691480682.3327088-UTR-H-paniculata_contig124:4619..51261691480682.3327088-UTR-H-paniculata_contig124:4619..5126Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig124 4620..5126 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928959.4543998-CDS-H-paniculata_contig124:2085..21931622928959.4543998-CDS-H-paniculata_contig124:2085..2193Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig124 2086..2193 +
1691480682.2958221-CDS-H-paniculata_contig124:2085..21931691480682.2958221-CDS-H-paniculata_contig124:2085..2193Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig124 2086..2193 +
1622928959.4738443-CDS-H-paniculata_contig124:2621..31791622928959.4738443-CDS-H-paniculata_contig124:2621..3179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig124 2622..3179 +
1691480682.3043354-CDS-H-paniculata_contig124:2621..31791691480682.3043354-CDS-H-paniculata_contig124:2621..3179Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig124 2622..3179 +
1622928959.5143282-CDS-H-paniculata_contig124:4046..46191622928959.5143282-CDS-H-paniculata_contig124:4046..4619Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig124 4047..4619 +
1691480682.3139098-CDS-H-paniculata_contig124:4046..46191691480682.3139098-CDS-H-paniculata_contig124:4046..4619Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig124 4047..4619 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig124.1507.1

>prot_H-paniculata_contig124.1507.1 ID=prot_H-paniculata_contig124.1507.1|Name=mRNA_H-paniculata_contig124.1507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=413bp
MDARCRTQALGILFLLVLAVMFVQLGSGASAADAKTGSAVAGEEKGYPDS
TIKLSTEALESIASLDDHPVEDNAAARADRMLAALEAIPEDERFHMGLDV
EEMRTVPLAQRLVKLQELWNVRQQELKEAYDAIPKVNELLMARIEVLQAT
DSSESALLLALTDLEDLLSDIDMARDFHSLEGFPVLTSMLNLSQTEAVRE
MAAWVIGTAVKNEPSHQLWVLEDGAGTRDSALTLLLKNGIAAETSSLRNK
VVYSLSASLSNNAQVQLAFGSSGGEAKLSAMYDADGSDYRLRTRILVLLS
DLLNEGARGSPAAVLATMPVGSTPKSGGAWCGRADEVLQHAASPVALEKV
LEVVVSLAPSCGDQFARLGVKQRLNTLTQQCRSSATVGSEAGEAEFHEEL
AQKFGEIAAALR*
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mRNA from alignment at H-paniculata_contig124:1855..5126+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig124.1507.1 ID=mRNA_H-paniculata_contig124.1507.1|Name=mRNA_H-paniculata_contig124.1507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3272bp|location=Sequence derived from alignment at H-paniculata_contig124:1855..5126+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCATTTTCGAACTTTGCGCACTCTCTCCTGTCTGTAATGTACCAGACTCT ACCGTGCTGTATTGTGCCTTGCCAGACAAAGCTCACAGCCTTCTCTCTCC TTTCCTTCCTGCTTTCAACACACCAGGGCCACTACGATACAAGCAAGTAT TCAACCAGTTCAGTTCTAAATCTTCTGCCCCCATCTCTGTGAGGGTCAAT CAGTTGAGCGTCGACCCCATCAACAATCGAGATGGATGCACGATGTCGAA CGCAGGCACTAGGCATCTTGTTCCTGCTGGTGCTGGCTGTGATGTTCGTC CAATTAGGCTCGGGGGCATCGGCCGCGGATGCCAAAACAGTGAGTTATTG ACCTAGAGCGGAAGCGGGGGCGAGCGGGAAACAGTATGGCCGTGTTCACG CACTTGAAGTCGTGCGTGATAAACGCGCTTTATGCTTTCGTTTTGAGAGG ACAGACGTCCGTTGTCCTACTGCGTCAAGTGTACTGTCTCTTTGAACAGC CGCAACTCACTCTGCGAAAACCACCCGAGGCCAGCAGGATGTATTTTTGG CTCTGATGTGACCATATTGTAAGAGCACCGATTGCAGGACATCGGGCACT CCTTATCTGTTGTGACTGCATCATTACAACTCTATACCGTCAAGGGTAGT CTCCAATAAATAGTCTCCAATACATCAAATCATCGCTTTGTCCTTCAAGG AATGCTTCCTAGCCCCACTTCGACTGGTGGTACCTCTACCTTTGCATTTA CTTTCGTTGCTTGGTAGGGAAGCGCAGTAGCAGGGGAAGAAAAGGGTTAC CCAGACTCGACCATTAAGCTGAGCACAGAGGCCTTGGAGTCTATTGCAAG CCTGGACGATCACCCAGTGGAAGATAACGCTGCTGCGAGGGCAGACAGGA TGCTGGCTGCTCTTGAGGCCATTCCCGAAGACGAGCGGTTCCACATGGGA CTTGATGTCGAAGAGATGCGCACTGTGCCTCTCGCACAACGTTTGGTTAA GTTGCAAGAGCTGTGGAACGTGCGGCAGCAGGAGCTGAAGGAAGCGTATG ATGCGATTCCCAAGGTTAACGAGCTCCTTATGGCGCGCATAGAAGTCCTT CAAGCCACCGACTCATCGGAATCTGCTCTTTTGCTTGCTCTGACGGACCT GGAAGACTTGTTGTCGGACATCGACATGGCCAGAGATTTTCACTCTCTCG AAGGCTTCCCCGTCCTAACTTCAATGTTAAATTTGTCCCAAACCGAGGCT GTCCGCGAGATGGCGGCGTGGGTCATTGGGACCGCGGTCAAGAATGAACC AAGTCATCAACTATGGGTTTTGGAGGTGAGAAAACATATAGTAAAATCTC GTGCCTGTCATAAGTCGTGCCACCTACGCGAGCACGCGAGATATTGTTGG GGTATGAGGAGTCCTGCCCACTTCACCCGGCGCCTGATGAAATGTCTTCA GTACGTCTTCAGCACACAAATAGATGGAAATCGTGTACCTGTTTGAAGGC ATCCGTTGCGACCAATATTGTTCCATATTCTTGTTGTGATATAGGGGAAG GGGTAGATTACACGTTGCACGTACACCACAGGGTATCCACGTACACCACA GGGTATCCACGTACACCACAGGGTATCGCAAGCTCCCTCAGCGGCGACCG ATGACTGTGTCCTGCCATACATTGACCAACTCCCGGTATATGCTGGCGAC ACTCAAACCAATGTCAACAAACAGGCGATACTCAGGATTGGGGATCAACT TTCTTGTTGGGATTGAAGTTCCGTTGAATTTTAATGGAATACTTCAAAAG TGGTGTTCACGAAAGGCACTTTCCGGGGAGCTTTTGTGTCCATCTCACTG CTATTTACTCCGCACAATGAATTTGGAAACCTTTTCATACCTTGATCCGC ACGGAAAATGCCTTTTGCTAACACCGTTTTCGAAGTATTCCGTTCAAAGT CAACGGAACGCCAATTCCAACAAGAAAGTTGATCCCCAATCCCGAGTATT GCCTGTTAAGGACGAGATCATACTCTGACCGTCTTTGGGTGGGCAACTCT TGCCGTGCCGTGTTCTTGTACAGCAGGCCACGCCCGATATTGGATCTTGA CACTGTCACTTTACCCTCACAAAAAGGCCCTCGCCCCGCCATTTGTATGC CCTCTCCTCTGTAATTGTCTGTGTGTGTGTTTCTATTTCCAGGATGGAGC CGGAACGCGGGACTCAGCCTTGACTCTCTTGCTCAAGAACGGCATTGCAG CTGAGACCTCGAGCCTGCGGAACAAAGTAGTGTACTCGTTATCCGCTAGC TTAAGTAACAACGCCCAAGTGCAGCTTGCGTTTGGCTCGTCAGGGGGTGA AGCGAAGCTGTCCGCCATGTATGACGCGGACGGATCCGATTATAGGTTGC GAACGAGGATCCTCGTCTTGTTGTCGGACTTGCTGAACGAGGGCGCCAGA GGTTCGCCGGCCGCTGTCCTGGCTACTATGCCTGTCGGTTCTACACCCAA GTCTGGGGGCGCTTGGTGTGGCCGGGCAGATGAAGTACTCCAACACGCGG CTTCCCCCGTTGCGTTGGAGAAAGTGCTTGAGGTTGTTGTGTCGTTGGCA CCGTCTTGTGGGGACCAGTTTGCACGTCTTGGCGTGAAGCAGCGTCTCAA TACCTTGACGCAGCAATGTCGTAGTTCAGCTACAGTAGGGTCTGAAGCGG GAGAGGCGGAGTTTCATGAGGAGTTAGCACAGAAATTCGGAGAGATTGCT GCAGCACTTCGATGACGTATTCGAACCATAACGAACATGTGCGTGTTTCA TATAACTTTGTGAATTTGGGCAGGTAGAGGGGAATATCATGTAAATTTAT ACTAGGTTATGTACTTTCATTCGCGTGTACGGGAGACCAACTTATATAAT TGAACATTTTTGGCTCTCCTATGGACGTGCTGACCATGTATCTGTGACGT TACACGATATCATGAAGCGCTCTGAACTGTGCACTGGCAGAGAGTTTATT TTTTGTTTTTTCTTGGGGACGATTAACAATGGTTGCCCCTATCCGGTACG CCAACACCGTTATAGCAACAAAACTGGAGAAAAGGAGCAGAAAATGTGGC GTTTTCAGCACATCCAACAAGTGATGTCAGACCTAATTATTGTTACCGGT ATGGTGATAATAACGGACCGGTTGTCTGGTAATACTAATAATGGTGTACG TCGAGCCAACCGATCCTCGACTTTCCCCCGCGTTTAACTACAGGAGAGTA TCCTAGCAAATGCTCCTTGGTC
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Coding sequence (CDS) from alignment at H-paniculata_contig124:1855..5126+

>mRNA_H-paniculata_contig124.1507.1 ID=mRNA_H-paniculata_contig124.1507.1|Name=mRNA_H-paniculata_contig124.1507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2478bp|location=Sequence derived from alignment at H-paniculata_contig124:1855..5126+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGCACGATGTCGAACGCAGGCACTAGGCATCTTGTTCCTGCTGGT
GCTGGCTGTGATGTTCGTCCAATTAGGCTCGGGGGCATCGGCCGCGGATG
CCAAAACAATGGATGCACGATGTCGAACGCAGGCACTAGGCATCTTGTTC
CTGCTGGTGCTGGCTGTGATGTTCGTCCAATTAGGCTCGGGGGCATCGGC
CGCGGATGCCAAAACAGGAAGCGCAGTAGCAGGGGAAGAAAAGGGTTACC
CAGACTCGACCATTAAGCTGAGCACAGAGGCCTTGGAGTCTATTGCAAGC
CTGGACGATCACCCAGTGGAAGATAACGCTGCTGCGAGGGCAGACAGGAT
GCTGGCTGCTCTTGAGGCCATTCCCGAAGACGAGCGGTTCCACATGGGAC
TTGATGTCGAAGAGATGCGCACTGTGCCTCTCGCACAACGTTTGGTTAAG
TTGCAAGAGCTGTGGAACGTGCGGCAGCAGGAGCTGAAGGAAGCGTATGA
TGCGATTCCCAAGGTTAACGAGCTCCTTATGGCGCGCATAGAAGTCCTTC
AAGCCACCGACTCATCGGAATCTGCTCTTTTGCTTGCTCTGACGGACCTG
GAAGACTTGTTGTCGGACATCGACATGGCCAGAGATTTTCACTCTCTCGA
AGGCTTCCCCGTCCTAACTTCAATGTTAAATTTGTCCCAAACCGAGGCTG
TCCGCGAGATGGCGGCGTGGGTCATTGGGACCGCGGTCAAGAATGAACCA
AGTCATCAACTATGGGTTTTGGAGGGAAGCGCAGTAGCAGGGGAAGAAAA
GGGTTACCCAGACTCGACCATTAAGCTGAGCACAGAGGCCTTGGAGTCTA
TTGCAAGCCTGGACGATCACCCAGTGGAAGATAACGCTGCTGCGAGGGCA
GACAGGATGCTGGCTGCTCTTGAGGCCATTCCCGAAGACGAGCGGTTCCA
CATGGGACTTGATGTCGAAGAGATGCGCACTGTGCCTCTCGCACAACGTT
TGGTTAAGTTGCAAGAGCTGTGGAACGTGCGGCAGCAGGAGCTGAAGGAA
GCGTATGATGCGATTCCCAAGGTTAACGAGCTCCTTATGGCGCGCATAGA
AGTCCTTCAAGCCACCGACTCATCGGAATCTGCTCTTTTGCTTGCTCTGA
CGGACCTGGAAGACTTGTTGTCGGACATCGACATGGCCAGAGATTTTCAC
TCTCTCGAAGGCTTCCCCGTCCTAACTTCAATGTTAAATTTGTCCCAAAC
CGAGGCTGTCCGCGAGATGGCGGCGTGGGTCATTGGGACCGCGGTCAAGA
ATGAACCAAGTCATCAACTATGGGTTTTGGAGGATGGAGCCGGAACGCGG
GACTCAGCCTTGACTCTCTTGCTCAAGAACGGCATTGCAGCTGAGACCTC
GAGCCTGCGGAACAAAGTAGTGTACTCGTTATCCGCTAGCTTAAGTAACA
ACGCCCAAGTGCAGCTTGCGTTTGGCTCGTCAGGGGGTGAAGCGAAGCTG
TCCGCCATGTATGACGCGGACGGATCCGATTATAGGTTGCGAACGAGGAT
CCTCGTCTTGTTGTCGGACTTGCTGAACGAGGGCGCCAGAGGTTCGCCGG
CCGCTGTCCTGGCTACTATGCCTGTCGGTTCTACACCCAAGTCTGGGGGC
GCTTGGTGTGGCCGGGCAGATGAAGTACTCCAACACGCGGCTTCCCCCGT
TGCGTTGGAGAAAGTGCTTGAGGTTGTTGTGTCGTTGGCACCGTCTTGTG
GGGACCAGTTTGCACGTCTTGGCGTGAAGCAGCGTCTCAATACCTTGACG
CAGCAATGTCGTAGTTCAGCTACAGTAGGGTCTGAAGCGGGAGAGGCGGA
GTTTCATGAGGAGTTAGCACAGAAATTCGGAGAGATTGCTGCAGCACTTC
GATGAGATGGAGCCGGAACGCGGGACTCAGCCTTGACTCTCTTGCTCAAG
AACGGCATTGCAGCTGAGACCTCGAGCCTGCGGAACAAAGTAGTGTACTC
GTTATCCGCTAGCTTAAGTAACAACGCCCAAGTGCAGCTTGCGTTTGGCT
CGTCAGGGGGTGAAGCGAAGCTGTCCGCCATGTATGACGCGGACGGATCC
GATTATAGGTTGCGAACGAGGATCCTCGTCTTGTTGTCGGACTTGCTGAA
CGAGGGCGCCAGAGGTTCGCCGGCCGCTGTCCTGGCTACTATGCCTGTCG
GTTCTACACCCAAGTCTGGGGGCGCTTGGTGTGGCCGGGCAGATGAAGTA
CTCCAACACGCGGCTTCCCCCGTTGCGTTGGAGAAAGTGCTTGAGGTTGT
TGTGTCGTTGGCACCGTCTTGTGGGGACCAGTTTGCACGTCTTGGCGTGA
AGCAGCGTCTCAATACCTTGACGCAGCAATGTCGTAGTTCAGCTACAGTA
GGGTCTGAAGCGGGAGAGGCGGAGTTTCATGAGGAGTTAGCACAGAAATT
CGGAGAGATTGCTGCAGCACTTCGATGA
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