mRNA_H-paniculata_contig69852.14929.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: D8LQ86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ86_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.460e-38 Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 1
Query: 1 QPDGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESE--TATQNFQILLV 225
Q GQLREATEIQNLQIGEGDVCRG+ IPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCF E+E TATQNFQILLV
Sbjct: 163 QAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFAEAEGYTATQNFQILLV 239
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: A0A6H5KT71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT71_9PHAE) HSP 1 Score: 136 bits (343), Expect = 6.910e-38 Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 1
Query: 1 QPDGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESE--TATQNFQILLV 225
Q GQLREATEIQNLQIGEGDVCRG+ IPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCF E+E TATQNFQILLV
Sbjct: 226 QAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFAEAEGYTATQNFQILLV 302
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: UPI000C6D5C96 (Down syndrome critical region protein 3-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D5C96) HSP 1 Score: 103 bits (256), Expect = 1.120e-25 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILL 222
+G R+ATEIQN+QIGEGD+CRG+AIPIYMV PRLF+CPT++T F++EFE+N++V F + T+NF I L
Sbjct: 146 EGYSRDATEIQNIQIGEGDICRGIAIPIYMVFPRLFTCPTLITNNFKIEFEVNIVVVFEDDRLITENFPIRL 217
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: T1KHU9_TETUR (Uncharacterized protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KHU9_TETUR) HSP 1 Score: 103 bits (258), Expect = 2.830e-25 Identity = 45/73 (61.64%), Postives = 60/73 (82.19%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILLV 225
+G R+ATEIQN+QIG+GD+CRG+ IPIYM+ PRLFSCPT++T F++EFE+NVIV F ++ T+NF I LV
Sbjct: 226 EGYARDATEIQNIQIGDGDICRGVPIPIYMIFPRLFSCPTLITSNFKIEFEVNVIVIFEDNHLITENFPIKLV 298
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: A0A8K1FJJ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJJ2_PYTOL) HSP 1 Score: 103 bits (256), Expect = 5.200e-25 Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILL 222
+G R+ATEIQN+QIG GDVCR M+IPIYM+ PRLF+CPTM+TPRF+VEFE NV+V F + T+NF I L
Sbjct: 223 EGVARDATEIQNVQIGWGDVCREMSIPIYMIFPRLFTCPTMLTPRFKVEFETNVVVLFEDGNMITENFPITL 294
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: UPI000BA8120E (Down syndrome critical region protein 3-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8120E) HSP 1 Score: 102 bits (253), Expect = 5.900e-25 Identity = 43/72 (59.72%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILL 222
+G R+ATEIQN+QIGEGDVCRG+ IPIYM+ PRLF+CPT++T F++EFE+N++V F + T+NF I L
Sbjct: 175 EGYSRDATEIQNIQIGEGDVCRGIVIPIYMIFPRLFACPTLITSNFKIEFEVNIVVVFEDDHLITENFPIKL 246
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: A0A3S4QC84_9ACAR (Down syndrome critical region protein 3-like protein n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S4QC84_9ACAR) HSP 1 Score: 102 bits (255), Expect = 7.420e-25 Identity = 44/73 (60.27%), Postives = 60/73 (82.19%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILLV 225
+G R+ATEIQN+QIGEGDVCRG+ IPIYMV PRLF+CPT++T F++EFE+N++V F ++ T+NF I L+
Sbjct: 224 EGYARDATEIQNIQIGEGDVCRGVPIPIYMVFPRLFTCPTLITCNFKIEFEVNIVVIFEDNHLITENFPIKLI 296
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: UPI0005CEDDC2 (Down syndrome critical region protein 3 homolog isoform X1 n=2 Tax=Ceratosolen solmsi marchali TaxID=326594 RepID=UPI0005CEDDC2) HSP 1 Score: 101 bits (252), Expect = 2.120e-24 Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILL 222
DG R+ATEIQN+QIGEG+VC G+AIPIYM+ PRLF+CPT++T F+VEFE+N+IV F T+NF I+L
Sbjct: 225 DGYSRDATEIQNIQIGEGNVCSGLAIPIYMIFPRLFTCPTLITSNFKVEFEVNLIVVFENDYLVTENFPIIL 296
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: A0A5D6XLT8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLT8_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.380e-24 Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILL 222
+G R+ATEIQN+QIG GDVCR +AIPIYM+ PRLF+CPTM+ PRF+VEFE N++V F + T+NF ++L
Sbjct: 195 EGVARDATEIQNVQIGWGDVCRQLAIPIYMIFPRLFTCPTMLAPRFKVEFEANIVVLFDDGNMITENFPLVL 266
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Match: R7U226_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7U226_CAPTE) HSP 1 Score: 100 bits (250), Expect = 3.980e-24 Identity = 40/72 (55.56%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 7 DGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFVESETATQNFQILL 222
+G ++ATEIQN+Q+ +GDVCRGMAIPIYM+ PRLF+CPT+ T F+VEFE+N+++ F + T+NF + L
Sbjct: 222 EGYAKDATEIQNIQVADGDVCRGMAIPIYMIFPRLFTCPTLTTSNFKVEFEINIVIVFTDDHLVTENFPVTL 293 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig69852.14929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig69852.14929.1 >prot_H-paniculata_contig69852.14929.1 ID=prot_H-paniculata_contig69852.14929.1|Name=mRNA_H-paniculata_contig69852.14929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp QPDGQLREATEIQNLQIGEGDVCRGMAIPIYMVLPRLFSCPTMVTPRFRVback to top mRNA from alignment at H-paniculata_contig69852:284..511+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig69852.14929.1 ID=mRNA_H-paniculata_contig69852.14929.1|Name=mRNA_H-paniculata_contig69852.14929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=228bp|location=Sequence derived from alignment at H-paniculata_contig69852:284..511+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig69852:284..511+ >mRNA_H-paniculata_contig69852.14929.1 ID=mRNA_H-paniculata_contig69852.14929.1|Name=mRNA_H-paniculata_contig69852.14929.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=456bp|location=Sequence derived from alignment at H-paniculata_contig69852:284..511+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |