mRNA_H-paniculata_contig6970.14912.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A6H5J7C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7C3_9PHAE) HSP 1 Score: 163 bits (413), Expect = 7.820e-49 Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 1
Query: 1 QVLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELARALPSTAGVGATG 282
QVL +VQEGKLD+GGNSPQKLCLVAICYHN+AVEQLILRH GEACMSSQNARRLARLCLSYSNRWL SFEGTHKLALAEL+R+L +T G GA G
Sbjct: 90 QVLAMVQEGKLDVGGNSPQKLCLVAICYHNMAVEQLILRHAGEACMSSQNARRLARLCLSYSNRWLHSFEGTHKLALAELSRSLSTTGGDGAGG 183
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: D8LGQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ9_ECTSI) HSP 1 Score: 163 bits (413), Expect = 2.280e-48 Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 1
Query: 1 QVLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELARALPSTAGVGATG 282
QVL +VQEGKLD+GGNSPQKLCLVAICYHN+AVEQLILRH GEACMSSQNARRLARLCLSYSNRWL SFEGTHKLALAEL+R+L +T G GA G
Sbjct: 127 QVLAMVQEGKLDVGGNSPQKLCLVAICYHNMAVEQLILRHAGEACMSSQNARRLARLCLSYSNRWLHSFEGTHKLALAELSRSLSTTGGDGAGG 220
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A7S4DBW1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBW1_HETAK) HSP 1 Score: 132 bits (333), Expect = 2.290e-37 Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 1 QVLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELA 243
QVL +V+ G+LD+GG SPQKLCLVA+ YHNIAVEQL LRHV AC +SQNARRLARLCLSYSNRWL++FE THK+ALAELA
Sbjct: 56 QVLHLVEAGRLDVGGQSPQKLCLVAVAYHNIAVEQLALRHVAGACTASQNARRLARLCLSYSNRWLKNFEATHKIALAELA 136
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A7S2AIR5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIR5_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.960e-36 Identity = 61/81 (75.31%), Postives = 73/81 (90.12%), Query Frame = 1
Query: 1 QVLVIVQEGKLDIG-GNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAEL 240
QVL +V+ G+L++G G PQKLCL+A+CYHNIAVEQLILRHV EAC+SSQNARRLARLCLSYSNRW++SFE TH++AL EL
Sbjct: 48 QVLAMVESGQLEVGQGQQPQKLCLIAVCYHNIAVEQLILRHVPEACISSQNARRLARLCLSYSNRWIKSFEYTHQVALGEL 128
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A7S1U6F4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6F4_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.780e-30 Identity = 59/81 (72.84%), Postives = 71/81 (87.65%), Query Frame = 1
Query: 1 QVLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELA 243
Q+L +V++ KLDIGG +PQKLCLVA+ YHNIAVEQL LRHV EAC+SSQNARRLARLCLSYSNR++ F+ TH+ ALA+LA
Sbjct: 791 QILTLVEDRKLDIGGLAPQKLCLVAVTYHNIAVEQLALRHVSEACISSQNARRLARLCLSYSNRFISQFDRTHRAALADLA 871
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A7S2WRN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRN3_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.430e-26 Identity = 46/80 (57.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 QVLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAEL 240
Q+L +V++ +L IGG + QK+CL+A+ YHNI +EQ+ +R EAC+SSQN RRLARL LSY+NRW+ +FE THK AL +L
Sbjct: 60 QILQMVEDERLQIGGTNAQKICLIAVAYHNITIEQIFMRRPAEACVSSQNGRRLARLSLSYANRWINNFESTHKFALRKL 139
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A2R5GTB3_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTB3_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.240e-25 Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 1 QVLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELA 243
Q+L +V + +L +GG + QK+C+VA+CYHNIAVEQL+LR EAC+SSQNARRLARL LS++NRW+ FE TH+ AL LA
Sbjct: 313 QILDMVDDERLQVGGTNAQKICMVAVCYHNIAVEQLVLRRPAEACVSSQNARRLARLSLSFANRWINWFERTHQYALQRLA 393
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A812XAI2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XAI2_9DINO) HSP 1 Score: 102 bits (253), Expect = 3.840e-25 Identity = 51/84 (60.71%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 4 VLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELARALP 255
VL +V E +L+ GG S QK+C+VA+CYHN+AVE L L EAC+ SQNARRLARL LSYSNR+LR FE TH AL L+ + P
Sbjct: 64 VLQLVDEERLETGGASAQKICMVAVCYHNVAVEHLALHQPQEACVDSQNARRLARLSLSYSNRYLRHFETTHAAALEALSLSKP 147
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A835Z279_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z279_9STRA) HSP 1 Score: 103 bits (257), Expect = 7.720e-25 Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 4 VLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELA 243
VL +V+ G N+ Q+LC+VA+CYHNIA EQL+ EAC SSQNAR+LARLCLSYSNRWL FEGTHKLAL+ LA
Sbjct: 152 VLAMVRRGSGGSSSNA-QQLCMVAVCYHNIAAEQLMAGRFAEACASSQNARKLARLCLSYSNRWLHHFEGTHKLALSGLA 230
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Match: A0A3R6XSZ9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XSZ9_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.470e-24 Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 4 VLVIVQEGKLDI---GGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNARRLARLCLSYSNRWLRSFEGTHKLALAELARAL 252
+L +V+E KL+ GG S QKLCLVA+CY+N+A+EQL L+ V A SSQNARRLARLCLSYSNRWL FE THK + +A L
Sbjct: 117 ILALVEEAKLEEDGGGGASAQKLCLVAVCYNNLALEQLHLKDVDGAATSSQNARRLARLCLSYSNRWLAQFENTHKAVIRAMATLL 202 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6970.14912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6970.14912.1 >prot_H-paniculata_contig6970.14912.1 ID=prot_H-paniculata_contig6970.14912.1|Name=mRNA_H-paniculata_contig6970.14912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp QVLVIVQEGKLDIGGNSPQKLCLVAICYHNIAVEQLILRHVGEACMSSQNback to top mRNA from alignment at H-paniculata_contig6970:1779..2963- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6970.14912.1 ID=mRNA_H-paniculata_contig6970.14912.1|Name=mRNA_H-paniculata_contig6970.14912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1185bp|location=Sequence derived from alignment at H-paniculata_contig6970:1779..2963- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6970:1779..2963- >mRNA_H-paniculata_contig6970.14912.1 ID=mRNA_H-paniculata_contig6970.14912.1|Name=mRNA_H-paniculata_contig6970.14912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig6970:1779..2963- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |