prot_H-paniculata_contig6880.14802.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6880.14802.1
Unique Nameprot_H-paniculata_contig6880.14802.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
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BLAST of mRNA_H-paniculata_contig6880.14802.1 vs. uniprot
Match: A0A7S2RZ48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ48_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.320e-5
Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 0 
Query:    3 ARAFLHLSDELRDAFAQGQDDENLRYLKVEVVDGDTLINTGFRQKGTSLEADFDSLSQEVQDGTPALFLLALDADE 78
            ARA L +S+ELR++F   QDD ++R+L+   +D +T+     R    S++ADFD+LS  +Q+   +  L   D D+
Sbjct:    4 ARANLFVSEELRNSFVAAQDDRSVRWLRA-TIDRETIALLEQRAGSPSVDADFDALSDVLQENGASFVLFCEDEDQ 78
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6880.14802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2RZ48_9STRA1.320e-536.84Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6880contigH-paniculata_contig6880:3860..7269 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6880.14802.1mRNA_H-paniculata_contig6880.14802.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6880 3860..7322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6880.14802.1 ID=prot_H-paniculata_contig6880.14802.1|Name=mRNA_H-paniculata_contig6880.14802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
MTARAFLHLSDELRDAFAQGQDDENLRYLKVEVVDGDTLINTGFRQKGTS
LEADFDSLSQEVQDGTPALFLLALDADELRLVTGRGVAAAVGGGG
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