prot_H-paniculata_contig687.14787.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig687.14787.1
Unique Nameprot_H-paniculata_contig687.14787.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length860
Homology
BLAST of mRNA_H-paniculata_contig687.14787.1 vs. uniprot
Match: A0A6H5L0D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D4_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 3.520e-40
Identity = 155/470 (32.98%), Postives = 213/470 (45.32%), Query Frame = 0
Query:   92 EAALNSNGAIKWNNFLAMASDIQLVPYLMDVGVLKASFHQVSAIPHVTQREVGSSSNNKLNTTRPMS--IRYPQFVEAISLLAFSTAGRLRLLYPDVAGQAPARHPSSTIEKSPGSPRERERMVNPERMVVHGQQSVTSG----------------RHAGGQGSQIAWVPGQT-VNALGGIAEMRRKKPTQAPNPSDPGTTDVGSRSNQSITSEASQPSYDLGALKAFFHHIRAAHEENRPRQHAGLNSTPAAGPRLQG-GWGNSDSLSVNEQPLPERQTTEGVGKTSAERPESNLDMSEGRSNESVECPSDTDE----------TEHSGPAQGGGKAGHRGEEMVRMRDSGQVFDQAMDWVSKLELKICRRNINERRDTRTG----SYLQPVDLPGGVGCDRDRSVST-GLGHGGNFARLVVIKEIQPIPDHAPRDVVRLLELALDHQQAGRFASALGILEKAAMLWEQ 526
            + A++    I W  FLA +SD+QLVP L+ +  LKA+  Q            G SS+     T+P +  + YPQFVE +SL+A S AGRLR LYPDVAG  P   P++      G PR R    N       G  S   G                R   G+GS  A  P Q     +     +R KK     +   PG  D      Q    E   P YD+GALKA FHH   AH+E R           +   R QG    N  S S++     +  TT+G G +    P SN   ++ +S E  E   + D            ++ G A  G  +    ++    ++S +V ++  D VS LE K+     +E      G    ++L   D    V  + +        G GG FARLVVIKE+QP+P+HAP+D  +LL+L LDH QAGR+A AL  LEK A++WE+
Sbjct:   34 QTAISKARRIHWTGFLAASSDLQLVPRLIGLDALKAAVEQG-----------GPSSDRNAAATKPSAAGMSYPQFVEVLSLVAISAAGRLRRLYPDVAGPEP---PAAV-----GDPRHRNTPTN---FTSDGTASRGGGGGGPLALEMTSEEAGRRDEAGEGSDNARSPFQRKARHVRAAMRLRMKKGRSVVDA--PGIPDAPPVDEQP---EQVPPYYDVGALKALFHHAETAHKEQR-----------SGTVRPQGFHCHNVSSSSLSPPACRDTMTTKGEGASERSSPRSNSSCTDEKS-EPSEGGGNYDRGRGEGRAISAVDYEGTAAKGPDSNIFLQKAFSPQESARVLEELRDRVSDLEAKVLPHETSEVETGANGEGSETFLPRRDDARAVVVEEEPGPEPLAPGAGGGFARLVVIKELQPVPEHAPQDASQLLDLTLDHHQAGRYALALETLEKGALMWEE 464          
BLAST of mRNA_H-paniculata_contig687.14787.1 vs. uniprot
Match: D7FM25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM25_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.800e-38
Identity = 148/472 (31.36%), Postives = 208/472 (44.07%), Query Frame = 0
Query:   92 EAALNSNGAIKWNNFLAMASDIQLVPYLMDVGVLKASFHQVSAIPHVTQREVGSSSNNKLNTTRPMS-IRYPQFVEAISLLAFSTAGRLRLLYPDVAGQAPA------RHPSSTIEKSPGSPRERERMVNPERMVVHGQQSVTSGRHAGGQGSQIAWVPGQTVNALGGIAEMRRKKPTQAPNPSDPGTTDVGSRSNQSITSEASQPSYDLGALKAFFHHIRAAHEENRPRQHAGLNSTPAAGPRLQGGWGNSDSLSVNEQPLPERQTTEGVGKTSAERPESNLDMSEGRSNESVECPSDTDETEHSGPAQGGGKA-GHRGE------------------------EMVRMRDSGQVFDQAMDWVSKLELKICRRNINERRDTRTGS----YLQPVDLPGGVGCDRDRSVST-GLGHGGNFARLVVIKEIQPIPDHAPRDVVRLLELALDHQQAGRFASALGILEKAAMLWEQ 526
            + A++    I W  FLA +SD+QLVP L+ +G LKA+  Q             SS  N   T R  + + YPQFVE +SL+A   AGRLR LYP+VAG  P       RH ++    +      R     P  + +  +++        G G++ +    +  +    +  +R KK         PGT D      Q    E   PSYD+GA KA FHH   AHEE R        +T   G   +    N  S S++     +  TT+G G +    P SN    +                E S P++GGG   G RGE                        ++   ++S +V ++  D VS LE K+     +E      G+    +L   D    V  + +        G GG FARLVVIKE+QP+P+HAP D   LL+LALDH QAGR+A AL  LEK  ++WE+
Sbjct:   35 QTAISKARRIHWAGFLAASSDLQLVPRLIGLGALKAAVEQGGP----------SSDRNAAATKRSAAGMSYPQFVEVLSLMAIPAAGRLRRLYPNVAGPEPPAAVVGPRHRNTPTNSTSDGTTSRGGGGGPLALEITSEEAGRRDEAGEGSGNERSLFQRKARHVRAAM-RLRMKKGRSVV--VAPGTPDAPPVDEQP---EQVPPSYDVGAFKALFHHAETAHEEKRS------GATRPQGFHCR----NVSSSSLSPPACRDTVTTKGEGASERSSPRSNGSCID----------------EGSEPSEGGGNDDGGRGEGRAISAVDYEGTAAEVSDSKTFPQKVFSPQESARVLEEIRDRVSDLEGKVLPHETSEVETGADGTGSETFLPRRDDARAVVVEEEPGPEPLAPGAGGGFARLVVIKELQPVPEHAPEDASHLLDLALDHHQAGRYALALETLEKGVLMWEE 464          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig687.14787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0D4_9PHAE3.520e-4032.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM25_ECTSI1.800e-3831.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 489..742

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig687contigH-paniculata_contig687:9526..15123 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig687.14787.1mRNA_H-paniculata_contig687.14787.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig687 9456..15753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig687.14787.1 ID=prot_H-paniculata_contig687.14787.1|Name=mRNA_H-paniculata_contig687.14787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=860bp
MVNVQWYALGRIEAQTLAAWCSCRYMRPLRDRRYAFACWRSTIYAVWFTS
NLWPSCRALWITGGTSPTPQVSNMKGRMIRGGSNQHKTPTREAALNSNGA
IKWNNFLAMASDIQLVPYLMDVGVLKASFHQVSAIPHVTQREVGSSSNNK
LNTTRPMSIRYPQFVEAISLLAFSTAGRLRLLYPDVAGQAPARHPSSTIE
KSPGSPRERERMVNPERMVVHGQQSVTSGRHAGGQGSQIAWVPGQTVNAL
GGIAEMRRKKPTQAPNPSDPGTTDVGSRSNQSITSEASQPSYDLGALKAF
FHHIRAAHEENRPRQHAGLNSTPAAGPRLQGGWGNSDSLSVNEQPLPERQ
TTEGVGKTSAERPESNLDMSEGRSNESVECPSDTDETEHSGPAQGGGKAG
HRGEEMVRMRDSGQVFDQAMDWVSKLELKICRRNINERRDTRTGSYLQPV
DLPGGVGCDRDRSVSTGLGHGGNFARLVVIKEIQPIPDHAPRDVVRLLEL
ALDHQQAGRFASALGILEKAAMLWEQALYMGTNRPAPARQSSEEGQQNVG
GRSRRLDVADQVKLYIMEAGIYQTAGKDVAALSTLLRASAPLGLIPACSL
SLKDALMAAVLSEMGVVTYYLGRPALALHCFRLAFILRHNILEHEQRNPD
NVEYPALRGLKGTHDLPFEARQDHSDSFVSIFAIAEAAAALTLNNVGTCL
ASVGEKGSAAESLTIASSVTTTALGIQHPRSAVVARNLALVRTAGSNNGS
CSNERNRVKTGNSAIAGPRHVAIMKDEVELWASLGSRLWKNGKTEGGTPC
ASPSKRLQPGGMSTSRILSGGFFFSGKLPPGAEGASVRLVRKKKKGTKKK
HGKSPTKTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf