mRNA_H-paniculata_contig6686.14575.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6686.14575.1
Unique NamemRNA_H-paniculata_contig6686.14575.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: D8LT01_ECTSI (DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT01_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 9.750e-67
Identity = 146/222 (65.77%), Postives = 165/222 (74.32%), Query Frame = 3 
Query:   48 GGTQVQYHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQGADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQAAPSTTTTVDVGAQLWATDSEHSREMLDQSTEAGASLRSHRLSGVRCASVDDVPPPSAPTPPAQVNEESPFALRRXXXXXXXXXXXXXXXXXXXXXAPEKLKGKAIDPKDFFSGA 713
            GGTQVQY ++LEGWVLDE+KVVTFRWLALVLSVTANAAKKMLYDFCQ QG  K+SATYLVVGR+G  GG G      VEV+LV  E L+ST+K+L  VT VHVYSVQ AP +    D+  QLWATD EH++EM+++STEAGA+LR+HRLSGVRC    DVP P AP                XXXXXXXXXXXXXXXXXXX  A  K KGKAI PKDFF+ A
Sbjct:   10 GGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRSG-IGGFG-----AVEVKLVSAEGLDSTRKALETVTCVHVYSVQPAPCSQPAADMSTQLWATDLEHTKEMVEESTEAGANLRTHRLSGVRCPEGVDVPVPKAPPXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAAA 222
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: UPI00148A5E77 (DNA polymerase delta subunit 3 isoform X1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A5E77)

HSP 1 Score: 80.5 bits (197), Expect = 1.560e-14
Identity = 53/109 (48.62%), Postives = 65/109 (59.63%), Query Frame = 3 
Query:   54 TQVQYHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQGADKI--SATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQAA 374
            T   Y E+LE +V DE K+VT++WL+L L V  N AK+MLY F + Q   KI  +ATY V G   S  G  QV   T  V  +P E LE+ K SL  V S+HVYSVQ A
Sbjct:    3 TDSMYLENLEEYVNDEGKIVTYKWLSLNLHVHVNEAKQMLYTFVEEQKKRKIHVAATYFVSGMCKSVDGC-QVQTYTCTV--IPEEELETFKNSLTTVHSIHVYSVQKA 108
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: A0A210R1H9_MIZYE (DNA polymerase delta subunit 3 n=4 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210R1H9_MIZYE)

HSP 1 Score: 82.4 bits (202), Expect = 2.060e-14
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 3 
Query:   18 DLMMVDGSSEGGTQVQYHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQ----GADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQAA 374
            +++++ G+ +  T   Y E+LE +V DE K+VT+RW +  L V  N AK+MLY F Q Q      D +S TY V G T    G  Q    TV    V  E LE+ + +L+ VTS H+YSVQ A
Sbjct:   68 EVLIIAGNKKMATDTLYLENLEEYVNDENKIVTYRWFSTNLKVHVNQAKQMLYAFVQDQRNNHDNDNLSVTYFVAGLTKPVNGHQQTHKCTV----VKEEDLEAYRSTLSVVTSSHIYSVQRA 186
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3)

HSP 1 Score: 79.7 bits (195), Expect = 1.220e-13
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 3 
Query:   66 YHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQGADKISATYLVVGRTGSTGGKGQVSDATV--EVRLVPFEALESTKKSLARVTSVHVYSVQAAPSTTTTVDVGAQLWATDSEHSREMLDQSTEAGA 473
            Y E+L+ +V+DE K+VT++WL+  LSV  N AK+MLY + Q Q    +  TYLV       GG+ +  D  V  ++ LV    LE+TK SL +VTSVH+YS+         +     L+  D + ++E L QS + GA
Sbjct:    7 YLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLV-------GGEQKDGDGLVMKKLSLVRGNQLEATKCSLDKVTSVHIYSIHKC-----LLKDSNALYTVDYDITKEHLHQSNKFGA 132
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: A0A0B6ZKT8_9EUPU (DNA polymerase delta subunit 3 (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZKT8_9EUPU)

HSP 1 Score: 79.3 bits (194), Expect = 2.200e-13
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 3 
Query:   72 EDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQ----GADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQAAPSTTTTVDVGAQLWATDSEHSREMLDQSTEAGASLRSHRLSGVRCA 512
            E+++ +V DE K+VT +WL+L+L++  NAAKK LY F +H      +++I+ TY V G + S  G     D   +  +VP   L++ KKSL+ VTS H+YSVQAA      +     L+ TD +  +E LD  +         R S ++C+
Sbjct:   14 ENIDEYVNDENKIVTSKWLSLMLNLNINAAKKALYSFVEHHRKKTDSNEINLTYFVAGLSTSKSG-----DLEHKCVVVPESQLDAVKKSLSVVTSCHLYSVQAAK-----LKDYIPLYQTDYDVIKENLDHCS---------RFSSIKCS 145
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: A0A2P2I6W8_9CRUS (DNA polymerase delta subunit 3 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I6W8_9CRUS)

HSP 1 Score: 77.8 bits (190), Expect = 5.610e-13
Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 3 
Query:   66 YHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQGADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQAAPSTTTTVDVGAQLWATDSEHSREMLDQSTEAG 470
            Y ++LE ++ DE +VVT++WL++ L +  N AK++LY +   +  D +  TYLV+G + +  G  Q      ++ + P   LE+ KK L  V  VHVYS+    S +   D  A L+  D + +RE L  +TE G
Sbjct:   95 YMDNLEEYINDENRVVTYKWLSITLQIPCNTAKRLLYHYLSTKNEDDLHITYLVMGTSTTPDGIKQA-----QIHVAPSLELEAVKKLLDAVECVHVYSL----SKSKLKDQTAALYTADYDCTRENLATATEYG 220
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: UPI001457F866 (DNA polymerase delta subunit 3-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457F866)

HSP 1 Score: 77.8 bits (190), Expect = 6.810e-13
Identity = 49/111 (44.14%), Postives = 62/111 (55.86%), Query Frame = 3 
Query:   54 TQVQYHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQ----GADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQAA 374
            T   Y E+LE +V DE K+VT+RW +  L V  N AK+MLY F Q Q      D +S TY V G T    G       TV+  +V  E LE+ + +LA VTS H+YSVQ A
Sbjct:    3 TDALYLENLEEYVNDENKIVTYRWFSTNLKVHVNQAKQMLYAFVQDQRNNHDNDSLSVTYFVAGLTKPVDGH-----QTVKCTVVKEEDLEAYRSTLAVVTSSHIYSVQKA 108
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: A0A1S3HVN9_LINUN (DNA polymerase delta subunit 3 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HVN9_LINUN)

HSP 1 Score: 77.8 bits (190), Expect = 7.160e-13
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 3 
Query:   66 YHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQ----GADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQ 368
            Y E+L+ +V DE KVVT++WL+  LSV  N AK+MLY F Q Q      DK+S  Y + G   +  G G++  A V    VP E+L++ K +L  VTS HVYSVQ
Sbjct:    7 YLENLDEFVNDENKVVTYKWLSRTLSVHVNQAKQMLYTFVQQQRNKKDNDKLSVCYFLSGMAETPDG-GKILKAMV----VPEESLDTMKSTLTTVTSCHVYSVQ 106
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: A0A8B8EMJ2_CRAVI (DNA polymerase delta subunit 3 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EMJ2_CRAVI)

HSP 1 Score: 77.4 bits (189), Expect = 9.000e-13
Identity = 49/107 (45.79%), Postives = 61/107 (57.01%), Query Frame = 3 
Query:   54 TQVQYHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQGADKIS--ATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSVQ 368
            T   Y E+LE +V DE K+VT++WL+L L V  N AK+MLY F + Q   KI+  ATY V G + S  G       T    ++P E LE  K SL  V  VHVYSVQ
Sbjct:    3 TDPMYLENLEEYVNDEGKIVTYKWLSLNLHVHVNEAKQMLYTFLEQQKKKKINLTATYFVSGLSKSVNGC-----QTYTCAVIPEEDLEVYKNSLTSVNCVHVYSVQ 104
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BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Match: UPI001B88DBF9 (DNA polymerase delta subunit 3-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBF9)

HSP 1 Score: 77.4 bits (189), Expect = 9.600e-13
Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 3 
Query:   66 YHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKMLYDFCQHQ---GADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTKKSLARVTSVHVYSV 365
            Y ++L+ +V DE +VVT++WL+ VL+V  N AK+ML+ FC+ Q     D IS TY V G T +    G  S    +  +V  E LES K SLA V  VH+YS+
Sbjct:    7 YLDNLDEFVNDENRVVTYKWLSRVLTVHVNEAKRMLFAFCEQQRNKDHDDISVTYFVAGSTAA----GMHSPQEYKCAVVSEEQLESYKASLAVVNCVHIYSI 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6686.14575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT01_ECTSI9.750e-6765.77DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus ... [more]
UPI00148A5E771.560e-1448.62DNA polymerase delta subunit 3 isoform X1 n=3 Tax=... [more]
A0A210R1H9_MIZYE2.060e-1440.65DNA polymerase delta subunit 3 n=4 Tax=Mizuhopecte... [more]
UPI0001CB96C31.220e-1338.41DNA polymerase delta subunit 3-like n=1 Tax=Saccog... [more]
A0A0B6ZKT8_9EUPU2.200e-1335.76DNA polymerase delta subunit 3 (Fragment) n=1 Tax=... [more]
A0A2P2I6W8_9CRUS5.610e-1334.81DNA polymerase delta subunit 3 (Fragment) n=1 Tax=... [more]
UPI001457F8666.810e-1344.14DNA polymerase delta subunit 3-like n=1 Tax=Pecten... [more]
A0A1S3HVN9_LINUN7.160e-1345.71DNA polymerase delta subunit 3 n=1 Tax=Lingula ung... [more]
A0A8B8EMJ2_CRAVI9.000e-1345.79DNA polymerase delta subunit 3 n=1 Tax=Crassostrea... [more]
UPI001B88DBF99.600e-1343.69DNA polymerase delta subunit 3-like isoform X1 n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6686contigH-paniculata_contig6686:3729..9181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.6
Seed ortholog evalue1.9e-55
Seed eggNOG ortholog2880.D8LT01
Preferred namePOLD3
KEGG rclassRC02795
KEGG koko:K03504
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03430,ko03440,ko05166,map00230,map00240,map01100,map03030,map03410,map03420,map03430,map03440,map05166
KEGG ModuleM00262
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000278,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006273,GO:0006281,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006298,GO:0006301,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016043,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019725,GO:0019899,GO:0019985,GO:0022402,GO:0022616,GO:0030894,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0033683,GO:0034061,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0042575,GO:0042592,GO:0042769,GO:0043150,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043601,GO:0043625,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0046483,GO:0050896,GO:0051276,GO:0051606,GO:0051716,GO:0060249,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0070182,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090305,GO:0104004,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902296,GO:1902319,GO:1902494,GO:1902969,GO:1902983,GO:1903047,GO:1903459,GO:1903460,GO:1904161,GO:1990234
EggNOG free text desc.nucleotide-excision repair, DNA gap filling
EggNOG OGs28HEU@1,2QPSW@2759
Ec32 ortholog descriptionDNA polymerase subunit Cdc27
Ec32 orthologEc-08_004310.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01009,ko03032,ko03400
Exons6
Model size726
Cds size702
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930791.129311-UTR-H-paniculata_contig6686:3728..37511622930791.129311-UTR-H-paniculata_contig6686:3728..3751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6686 3729..3751 +
1691481453.820954-UTR-H-paniculata_contig6686:3728..37511691481453.820954-UTR-H-paniculata_contig6686:3728..3751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6686 3729..3751 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930791.1596768-CDS-H-paniculata_contig6686:3751..38111622930791.1596768-CDS-H-paniculata_contig6686:3751..3811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 3752..3811 +
1691481453.8321118-CDS-H-paniculata_contig6686:3751..38111691481453.8321118-CDS-H-paniculata_contig6686:3751..3811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 3752..3811 +
1622930791.188731-CDS-H-paniculata_contig6686:5595..56781622930791.188731-CDS-H-paniculata_contig6686:5595..5678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 5596..5678 +
1691481453.8409271-CDS-H-paniculata_contig6686:5595..56781691481453.8409271-CDS-H-paniculata_contig6686:5595..5678Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 5596..5678 +
1622930791.2140925-CDS-H-paniculata_contig6686:6455..65731622930791.2140925-CDS-H-paniculata_contig6686:6455..6573Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 6456..6573 +
1691481453.8503385-CDS-H-paniculata_contig6686:6455..65731691481453.8503385-CDS-H-paniculata_contig6686:6455..6573Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 6456..6573 +
1622930791.2303805-CDS-H-paniculata_contig6686:8055..81811622930791.2303805-CDS-H-paniculata_contig6686:8055..8181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 8056..8181 +
1691481453.8601308-CDS-H-paniculata_contig6686:8055..81811691481453.8601308-CDS-H-paniculata_contig6686:8055..8181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 8056..8181 +
1622930791.2461178-CDS-H-paniculata_contig6686:8669..87491622930791.2461178-CDS-H-paniculata_contig6686:8669..8749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 8670..8749 +
1691481453.8699675-CDS-H-paniculata_contig6686:8669..87491691481453.8699675-CDS-H-paniculata_contig6686:8669..8749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 8670..8749 +
1622930791.265707-CDS-H-paniculata_contig6686:8946..91811622930791.265707-CDS-H-paniculata_contig6686:8946..9181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 8947..9181 +
1691481453.8806565-CDS-H-paniculata_contig6686:8946..91811691481453.8806565-CDS-H-paniculata_contig6686:8946..9181Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6686 8947..9181 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6686.14575.1prot_H-paniculata_contig6686.14575.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6686 3752..9181 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6686.14575.1

>prot_H-paniculata_contig6686.14575.1 ID=prot_H-paniculata_contig6686.14575.1|Name=mRNA_H-paniculata_contig6686.14575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=234bp
MMVDGSSEGGTQVQYHEDLEGWVLDERKVVTFRWLALVLSVTANAAKKML
YDFCQHQGADKISATYLVVGRTGSTGGKGQVSDATVEVRLVPFEALESTK
KSLARVTSVHVYSVQAAPSTTTTVDVGAQLWATDSEHSREMLDQSTEAGA
SLRSHRLSGVRCASVDDVPPPSAPTPPAQVNEESPFALRRGGGTAGAAAN
GGPKSKAGGGGAPEKLKGKAIDPKDFFSGAAGRG
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mRNA from alignment at H-paniculata_contig6686:3729..9181+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6686.14575.1 ID=mRNA_H-paniculata_contig6686.14575.1|Name=mRNA_H-paniculata_contig6686.14575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5453bp|location=Sequence derived from alignment at H-paniculata_contig6686:3729..9181+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGCCGAGACATACATCGATCTCATGATGGTGGATGGGTCATCCGAGGGA
GGGACGCAAGTCCAATACCACGAAGATTTAGAGGTGAGATGTTCAAGAGG
AAAAAGAGGAAAGAAACTTGGCTCGATGCTGTCCAAGCAACAATTATTAT
ATTACGTCATTTGCCAAACTTGGAAAGTACAATGACTGATAGTGAATTTT
AGTACCGATTTGCACCAACTTGTACCAAGTCTACTCACCTAACTTTGAGA
GTCTTATTCTATCGTGAACTATTTATGGTTGCGGACCTCATTTTCTGTCC
TTCCCCCAGCCTCGCTGACGCTATGCCTGCAGTGGTGGTGTCACTATAGC
GTCAGTCGAAGTTGAAATTTATTTATTGTTAAATGTGCTAGTATATATTC
TGTATAGATCCTTGTCCCACTTCCTCCTTTCCCCTCCCAAGGGCGGGCTG
ACGTAAGTGCTTCCTCGATCGGAGCGAATCTGACATGGTCTGTGTATGCT
GATTTCTATGCGTAGTTTTTACCTGATGGATTATTGAACATGTTTGGTTC
ACAGGCAGCTATTGTTCATGAATGCATTTTTATACACTGTTGCATGCCCT
CAATGGTGGTCGAACCAACCCCGATTTTAGTCCGATGTTGAGCGTCTTCG
CATTGGGTGCGTGCGCGCAAGTGGATGGGGGTGAGCGCTGTTGTGTGTGC
TGTGTAGAATCATGGATCGTCGTCCGATCATATTTTTGCAAGACTCAATA
GTGTATGGGTATGATCACGATAAAAATGCCCACAAACGTTATCGCCCGAG
TTGCGATTTATTACAACGAAAACCTGTACATAATGGCGCACATTCCGAAA
CAGAAAAATGAGGGATATATCCATGTACTGAACACATGGTGTACTCACCA
CTAAAAGACTGGCCAGTCTATGGATACCCTGAGACAACACTCGGGTTATC
AGACTTGTAAAAAAAACTGTTCGAAAAAGACCATCCATTACGTTCCCTTA
CTTCGTATTCTGTGTGGGTGTGGGAATGTAACGGTCGAGTGGGACATAGT
TTTCGATGTCGTATAATAGCAATCGTGGGCAGAGCATGAACGGCGTTCGT
AATTTCACGATAAGAAGCTACCGTCGATTCGAGAGTTGCCACATGCACGT
CTGGGCCTTATTTACGTCTGCCGTGGTTGGTAGCAGGCTCAGCAGGTCTC
AAATGTATGTTAGACCACGCAGGAGATCAGAGCACTCAAGAGCCTCCCTG
ATTCATGAAGAGAACACAAAAAACAAGCCGATCTCGTGGCATCAATAGGG
CCAGTTAGTGGCCACCTCAAATCAATGCCGAGCCATGGCAGAGGAAACAA
CTACTCCAGAAAAGCTTCACCCCCCGGAAAAATACGAATATTTGCAAATG
GTTTCCACAAAAAACTGAAAGTATTCGCCTGAGTTTCAGAATGAGTTCGT
GTATTCTATGTGCTCCGGACCATCCACGTTAGTGCTCATAATATTCGTAA
ATCCAACGAATAGGGATGGGTATTTCATTCTATATGTCCGCTCATTCTGA
AACTCAGGCGAATACATTCAATTTTTGTGGAAACTATTTGGAAATATTCG
TACTTGTCTGGAGGGTGAAAATTTTCAGTATGATTGCTATCTCAGTGCTT
GTTTTTATTTCGGTTGACATTGATATCCAGGGTTGCTTGTGTCTGTGTAT
TTTCCGCCTCTTCGCCCAATCTCAACTCGTACTTGGAACTTTTCTGATAT
GGTGATACCTGACCTTGGCAATCCCTCCCCCGCCCTAGCCTCCTCCTCGC
TGTCTGTCGTCCTCGCGCTTTGGATATCATTTCGTCTAAAGTCACCCCCC
CCCCCCCCGTATTGCAGGGATGGGTACTGGACGAGAGAAAGGTGGTGACC
TTCCGCTGGCTGGCGCTGGTGCTGTCGGTTACCGCCAATGCCGCCAAAAA
GTGAGCCAGCGTTAGGGGATGACCGTACGGTGCCGTTGTCGGTCGGCGCG
TTCTCTGTCGCGAAGAAACCACAGCGTTCGTTTGGCGTGTGATGCCATAC
TTGAGTTTGATGCGCAGTTTACATTTAGGGGGACAGTTTTTGTTATGTTT
GACGGGCGTGACTGACTGACCTAAGACCTGCGCAATGGAATTTCCTCACC
CCTACTTTTGGCTAGCCCTGAAAACCGTTAACAATACTCGCTCTGCTACC
TGTGCCAGCGGAGGCAAATGTATAATCGGACGTATTCATTTTTTTTTTTT
TTTTAACCCCCGGAAGGCTGAGGCAAAAACCTTTACCGATGCTTCCATAC
TTGAGTATTTTACCAGAGTATTTCTACATTTCCTTTAACAGAACAGAGCG
TATTCATGTTATTCCCTCCAACGAGGCTCAGTCAGGTTAGTCTATTGAGG
AAAGCCCCTAGAGCATCGAAGACTTCGATAGGCACCGACGCATAGAATAA
GATCACATGCCACTTCTCTCAATTAGAAAAATGCCGGGTCGGGCCCACCA
CCCCGAAGAACCCCACCGTTCTTGAGCAATGCTTTGAGTTAGACCCAATC
GGACCGGACCGGGCCGGAACGGAACGGAACGGAACGGATCGAACAGAACA
GAACAAAACAGAACCCAATCAAATAGTTCAGACCCCAATCCACCAGGATG
ACACCCAGACGAAACGTCCATGCTCCCGCCCCTCGCTCCCCTTTTGTTTG
TTCTCTATCCCGATGCTATCCCTTCAGGATGCTGTACGATTTCTGCCAGC
ACCAGGGGGCGGATAAGATTTCGGCAACATACCTCGTCGTGGGACGGACC
GGAAGCACAGGAGGGAAAGGTCAAGTATCCGATGCTACCGTCGAGGTTAG
TTGTGGACGTGGTGCTGGCGGTGCCTATCTCTCTCCTCCTCCTCCTCCTC
CTCCTCCTCACCCTCTGCCGCTGTACAAATCAAGGAATCTTTCTTTGTCA
AAATCCTCTTTTGGTTCGATTTCAGCATAACTCGTAGGAGTATAAACATA
GAACGTGATTATTCCCAATGTAATCGAGGAAGATTGTATGATATATGTAT
GTATACGCATCTAAAAATGATGTTTTTTTATTTTGATTTATTCGAATAGC
TGTCATGGCACCCTCAAGAATGGATCGATCGCCGAATCGTATATTATGGC
AGAAGTTTTTTTTTGCTTGTTGCGCGTTTCCCACTGATGAAAAAGAAGAA
GAAAAAACTGGTTCAAGGCCGTGTTTCTAGGCTGTGCAGTACACTCTGTC
CGATTTTCTGGATCTATTTCCGCTTTAGTACTGTGTGCTGATCTGCAACT
GGGTGTTAAGTTCATGTCCTGCGGGTTGGATGTAGGACGTGGTTGGATGT
AGGTGAGGGTTGAGCTAAATAGGGTGGGTGAGTTTTTTTTGACACGCATT
TAGCAACGTAGAAAAGAACGATTGGTCATCGGAAGTCTCTCTGCTAGAAA
CAAAGCGCAGTCGTCCCGAGAACGCGTGGTCAATGGTCCAATAACCACGT
CATGCAACACATGAGTACGCCCTCCGCCTCCCGTCTCCCGTCTCCCTCTG
TGTGTTTTTTCTCTGTTGCTTTGTGCGGTCAATCCCATCTTCTGCAATAG
TTTTCCCTTGTATGCGCGAAGGTATTGTTTTCGTAATCTAGGCATTCTAT
CCTCTTTGGTGTTTCGAACACTCTTAGATCCGATCGATACTACCAAGTGT
CAGCCGATGTGCCCTCTTTTCTGCAGACTTGTGACCCGCTCCCCGCTCAT
TTGGTCGGTTCATCGACAAGTCGCTTAGGGCATTGAAGTTCATGAGCGTG
TACCTGTTTTTATTGCAGAACATTTTTCTACTCTACTGTCAAACTGAATC
GTCATCATCAAATCCGATGTATCTTTTGCTTTTTTTTTCAAACTTCCCAA
AATCGCGTACCTGTGGTGTACATGGCTGGTGGAGTTTCTCCTTGGCTAAT
GGCGTTCTTGTTGTTTGTCTTATCCTGTGCATGCATAAAATGCGTCCTCG
CCGTCACCCATTCGTGCACCATTCCTCTCGAGGACGCATGACCAACGGTT
CAAAATCTAACAAATACGCCGGCGTCGGAGGACGTCTCGTTAATGTTCAA
TCTTCTAACAGCTGAGGCATGCAAAAAATGTTAATACATACATCCCCCTC
TATCCTCGTGGTTAATTGTGCAACAACTAGGACATGTGGAACATGAGTAC
ACTACCCGCTCCTCATTAATCTAACTTTGCTGATAGTGTGTATAACTGAA
GTTGGGACTCAGTGTGTAATCCCAACATCAAAACACCCCCCCCCCCCCCC
CCGCCATTCCCCACCCTTCCTCTGTAGGTAAGGCTGGTTCCGTTCGAAGC
GTTGGAGAGCACAAAAAAGTCTTTGGCACGCGTCACGTCGGTGCATGTCT
ACAGCGTTCAGGCGGCTCCCTCAACCACCACCACGGTCGACGTCGGCGCT
CAGGTAGGTACACCTAAGGAGAAGAGAGACCCCCTCCGCCCACCCGTCAA
ACGACCAGTAAATATCATATAGCAAGACCAACATAGTAAGCGCATGTATC
TTTATAAGTGTGTTTAGTGTCTCGTTGAAAACTGTTGATAGGCAAGGGAC
AAAACGCGGCTTGCAACGAAAAGAAGGCGCGAGAAAAGATAGAAAAAAGG
AGTCAACAGCAAAATTAAGATGCGTGTTGTGTGTTTTGTGTTTTACCGGT
AGATTAGCGGTAAGCTCAAGTTCAAGCCCTGTCTTCGCTTCCCTTGTTCC
GCTGGGTGTTTCTCGTGCTGCCTGTCATAATTAAGACATAGCTTTTTGCT
TCGTCTCAACACTCTCGTGGCTTGGTTGTCCACGAATTATGTTACCCATC
CCTTCCCTGACCCTACCTGCACATCGTCTCCCCGCGTTCAGCTTCGCTTT
TTCTTCTTCTTTTACTGATTCTTTGGTGGATTTGTTCTCAGCTGTGGGCA
ACCGACTCCGAGCACTCCAGGGAGATGTTGGACCAGTCGACGGAGGCAGG
GGCCAGCTTGCGATCCCACAGGTTAGTATAGCTGCATTTGGGATTCATGA
TTACCTTCGGTATAGGAGCCAAAGGCGTAGAGTGTATGTCTAAATTTCTG
TTATCCCGGGGTAAAATTCACTGAAATGTGAAACTGTCGTCTTGCGGAGT
GCAGAATTCGCATCAAACGCCGCTACGTTATCATTCTCAAAGATTAAAAC
CTCACACCTAACAAATAGGTTAAGCGGTGTTAGGTGTGCCTCTGTGGACG
ACGTACCTCCTCCCTCGGCGCCGACCCCACCGGCCCAAGTCAACGAAGAA
TCTCCGTTCGCGCTGCGGCGCGGTGGTGGCACCGCAGGCGCCGCTGCAAA
TGGAGGCCCCAAATCGAAGGCAGGAGGCGGAGGCGCCCCGGAGAAGCTTA
AGGGCAAGGCCATCGATCCGAAGGATTTCTTTAGTGGGGCCGCGGGGAGG
GGG
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Coding sequence (CDS) from alignment at H-paniculata_contig6686:3729..9181+

>mRNA_H-paniculata_contig6686.14575.1 ID=mRNA_H-paniculata_contig6686.14575.1|Name=mRNA_H-paniculata_contig6686.14575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig6686:3729..9181+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGTGGATGGGTCATCCGAGGGAGGGACGCAAGTCCAATACCACGA
AGATTTAGAGATGATGGTGGATGGGTCATCCGAGGGAGGGACGCAAGTCC
AATACCACGAAGATTTAGAGGGATGGGTACTGGACGAGAGAAAGGTGGTG
ACCTTCCGCTGGCTGGCGCTGGTGCTGTCGGTTACCGCCAATGCCGCCAA
AAAGGATGGGTACTGGACGAGAGAAAGGTGGTGACCTTCCGCTGGCTGGC
GCTGGTGCTGTCGGTTACCGCCAATGCCGCCAAAAAGATGCTGTACGATT
TCTGCCAGCACCAGGGGGCGGATAAGATTTCGGCAACATACCTCGTCGTG
GGACGGACCGGAAGCACAGGAGGGAAAGGTCAAGTATCCGATGCTACCGT
CGAGGATGCTGTACGATTTCTGCCAGCACCAGGGGGCGGATAAGATTTCG
GCAACATACCTCGTCGTGGGACGGACCGGAAGCACAGGAGGGAAAGGTCA
AGTATCCGATGCTACCGTCGAGGTAAGGCTGGTTCCGTTCGAAGCGTTGG
AGAGCACAAAAAAGTCTTTGGCACGCGTCACGTCGGTGCATGTCTACAGC
GTTCAGGCGGCTCCCTCAACCACCACCACGGTCGACGTCGGCGCTCAGGT
AAGGCTGGTTCCGTTCGAAGCGTTGGAGAGCACAAAAAAGTCTTTGGCAC
GCGTCACGTCGGTGCATGTCTACAGCGTTCAGGCGGCTCCCTCAACCACC
ACCACGGTCGACGTCGGCGCTCAGCTGTGGGCAACCGACTCCGAGCACTC
CAGGGAGATGTTGGACCAGTCGACGGAGGCAGGGGCCAGCTTGCGATCCC
ACAGCTGTGGGCAACCGACTCCGAGCACTCCAGGGAGATGTTGGACCAGT
CGACGGAGGCAGGGGCCAGCTTGCGATCCCACAGGTTAAGCGGTGTTAGG
TGTGCCTCTGTGGACGACGTACCTCCTCCCTCGGCGCCGACCCCACCGGC
CCAAGTCAACGAAGAATCTCCGTTCGCGCTGCGGCGCGGTGGTGGCACCG
CAGGCGCCGCTGCAAATGGAGGCCCCAAATCGAAGGCAGGAGGCGGAGGC
GCCCCGGAGAAGCTTAAGGGCAAGGCCATCGATCCGAAGGATTTCTTTAG
TGGGGCCGCGGGGAGGGGGGTTAAGCGGTGTTAGGTGTGCCTCTGTGGAC
GACGTACCTCCTCCCTCGGCGCCGACCCCACCGGCCCAAGTCAACGAAGA
ATCTCCGTTCGCGCTGCGGCGCGGTGGTGGCACCGCAGGCGCCGCTGCAA
ATGGAGGCCCCAAATCGAAGGCAGGAGGCGGAGGCGCCCCGGAGAAGCTT
AAGGGCAAGGCCATCGATCCGAAGGATTTCTTTAGTGGGGCCGCGGGGAG
GGGG
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