mRNA_H-paniculata_contig6672.14558.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig6672.14558.1
Unique Name	mRNA_H-paniculata_contig6672.14558.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 3.600e-141
Identity = 201/299 (67.22%), Postives = 235/299 (78.60%), Query Frame = 2

Query:  269 SDLKVLYSDEDIVVLDKPPGLRTVPGSIKSTEGSKSINRAQTEWHSGNKRSRQDFWIDVVHKACNSMLEDEQIAGNTELQGHLQRLTRENNVPRKRSKFANYAAVTLGLHGEEGEAISSRIWNAVDSRLKVEAGPGTDCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            SD+ V++SD DIVVL+KP GLRTVPG     E      R   EWHSG KR RQ+FW DVVH AC S+L DE+  G  E + HL+RLT+ENNVPRKRSKF NY AVTLGL GEEG+ +S+R+W+ VD  LK E GPG DCLLTRV+ RWPEARHVHRLDQ TSG++VMALT EAA+E+ RQFRERV SKTY AVLEGRMAK+PKSG V AK+RPD ++RP+Q+  E+ GN A T WE + R+ DR+ V+FTPVTGRTHQIRMHA+ LGHP+MGDSLYGT EG AKSERLLLHA R+ F H
Sbjct:   22 SDVDVIFSDPDIVVLNKPTGLRTVPGKAVGPEAE---TRVHVEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGTAKSERLLLHARRISFPH 317

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A1H9I0B1_9GAMM (Pseudouridine synthase n=1 Tax=Amphritea atlantica TaxID=355243 RepID=A0A1H9I0B1_9GAMM)

HSP 1 Score: 161 bits (407), Expect = 4.770e-44
Identity = 83/162 (51.23%), Postives = 109/162 (67.28%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            DCL  RV+  +P AR VHRLD  TSGVMV+AL+  + + LS QF+ER T K+Y A++ GR+AK+  SGTV   +R D  +RP QI+D + G +A+T W L+ +  D S V  TP+TGR+HQ+R+H   LGHPI+GD  Y T     +SERLLLHA  L F H
Sbjct:   38 DCLWRRVQQHYPTARIVHRLDYATSGVMVLALSATSHRHLSIQFQERKTDKSYQAIVAGRLAKN--SGTVNQPLRCDWENRPLQIIDHQQGKSAQTHWRLIEQLDDASRVELTPITGRSHQLRVHMQFLGHPILGDRFYATPRQIERSERLLLHAHSLSFSH 197

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2Z4UKY3_9HYPH (Ribosomal large subunit pseudouridine synthase A n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UKY3_9HYPH)

HSP 1 Score: 159 bits (403), Expect = 2.490e-43
Identity = 81/162 (50.00%), Postives = 110/162 (67.90%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            DCL TR ++ +P A  VHRLD  TSG++VMA+TP A + L  QF +R T KTY A + G+M +    GTVVA I  D  +RPRQ++D + G +AETRW++L REA  S V   P TGR+HQ+R+H LSLGHPI+GD++Y  ++    ++RL LH+T L   H
Sbjct:   48 DCLETRARIEFPTATIVHRLDMDTSGILVMAMTPNAHRHLGLQFEKRKTKKTYTARVWGKMTED--EGTVVAPIITDWPNRPRQMIDFEKGRSAETRWQVLDREAGASRVALYPHTGRSHQLRVHMLSLGHPILGDNIYAHDDAFNAADRLQLHSTSLTLHH 207

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2E0XYT5_9BACT (Pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E0XYT5_9BACT)

HSP 1 Score: 159 bits (401), Expect = 3.900e-43
Identity = 77/162 (47.53%), Postives = 112/162 (69.14%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            DCL  R +  +P AR VHRLD+ TSG++VMA   +A +ELSRQF++R   K Y AV+ G +A     GT+ A IR D+++ PRQ++D+ +G  + T WE++ R+ DR+ +   P+TGR+HQ+R+H LS+GHPI+GD LY  E+ +  + RL+LHAT LG  H
Sbjct:   40 DCLAARAERAYPGARIVHRLDRDTSGLIVMARDADAHRELSRQFQDREVDKNYEAVVGGLVAID--EGTIDAPIRKDMDNPPRQLIDDVHGRPSVTHWEVIERQGDRTRLKLHPITGRSHQLRLHLLSIGHPILGDDLYAPEDLRDAATRLMLHATLLGLKH 199

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A7W2BME3_9HYPH (RNA pseudouridine synthase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W2BME3_9HYPH)

HSP 1 Score: 159 bits (402), Expect = 4.170e-43
Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            DCL+TR+  R+P+AR VHRLD  TSGVMV+A+ P A + L  QF  R   KTYIA+++G +A    SG V   IR D  +RPRQ++D   G +A T W++L+RE DRS +   P+TGR+HQ+R+H   LGHPI+GD+LY  E  +    RL LHA  L   H
Sbjct:   54 DCLITRLHKRYPQARIVHRLDLDTSGVMVIAMNPAAHRHLGLQFERRHVEKTYIALVDGNVAAD--SGRVDLPIRVDWPNRPRQMIDHAEGRSAVTDWQVLAREDDRSRIALRPLTGRSHQLRLHMRELGHPILGDTLYAPEAARKAMPRLCLHALNLSLYH 213

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A6N0HZW1_9GAMM (Pseudouridine synthase n=2 Tax=Gammaproteobacteria incertae sedis TaxID=118884 RepID=A0A6N0HZW1_9GAMM)

HSP 1 Score: 158 bits (400), Expect = 4.590e-43
Identity = 82/164 (50.00%), Postives = 112/164 (68.29%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKS--GTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            DC+++R+ + +PEA  VHRLD  TSG+MV+A   EA +ELSRQF++R   K YI+++ G    SP    G++   +R D  +RPRQ+VD K G AA T W +LSR+ DRS +  TPVTGR+HQ+R+H LS+ +PI+GD LY  EE    + RL+LHAT L F H
Sbjct:   35 DCVVSRLAIDYPEALIVHRLDWETSGLMVLARNREAHRELSRQFQDREVEKQYISIVYG----SPPEDHGSIDLPLRCDWPNRPRQMVDHKQGKAALTHWRVLSRDNDRSRIELTPVTGRSHQLRVHLLSIDNPILGDQLYAHEEALQMANRLMLHATSLSFRH 194

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: UPI001A8EBC93 (pseudouridine synthase n=1 Tax=Motiliproteus sp. SC1-56 TaxID=2799565 RepID=UPI001A8EBC93)

HSP 1 Score: 158 bits (399), Expect = 6.080e-43
Identity = 80/162 (49.38%), Postives = 110/162 (67.90%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            DCL  RV+ ++P AR VHRLD  TSGVMV+AL  ++ + LSRQF+ER T K Y+ +++GR+    ++G V   +R D ++RP Q+VD   G AA T W +L R AD + +  TP+TGR+HQ+R+H  SLGHPI+GD+ Y     +A S RLLLHA RL  +H
Sbjct:   32 DCLWHRVQQQFPTARIVHRLDCATSGVMVLALNADSHRALSRQFQERQTDKRYVCIVDGRVV--AETGHVALPLRCDWDNRPLQMVDFAQGKAALTHWRVLERAADHTRLALTPITGRSHQLRVHMKSLGHPILGDAFYAPPRVQAVSPRLLLHAERLRLIH 191

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A1G3AV14_9BACT (Pseudouridine synthase n=2 Tax=unclassified Planctomycetes TaxID=473814 RepID=A0A1G3AV14_9BACT)

HSP 1 Score: 158 bits (400), Expect = 7.330e-43
Identity = 86/180 (47.78%), Postives = 112/180 (62.22%), Query Frame = 2

Query:  641 VDSRLKVEAGPGT-----DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            VD    + + PG      DCL+ RV+ R+P+AR VHRLD  TSG+MV+A  PE+ +ELSRQF+ R T KTY+A + G       SG V   +R DL  RP QI+D + G  A+T W++L R  D   +  TPVTGRTHQ+R+H  +LGHPI+GD LY  E   A ++RL LHA  L   H
Sbjct:   31 VDKPANILSVPGRTPEKQDCLIHRVQKRFPKARIVHRLDFSTSGLMVIAQNPESHRELSRQFQNRETEKTYVAKVYG--CPDEPSGEVNLPLRCDLERRPLQIIDYQQGKTAQTFWQILERYEDSCRMELTPVTGRTHQLRVHMQALGHPILGDELYAHETAFAMADRLFLHAQELIITH 208

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BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2E8J4A8_9GAMM (Pseudouridine synthase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8J4A8_9GAMM)

HSP 1 Score: 158 bits (399), Expect = 8.650e-43
Identity = 75/162 (46.30%), Postives = 117/162 (72.22%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            D +L R++  +P+   VHRLD  TSG++V++L+  A+ +L+RQFRERV  K Y+A+++G +A+   +G V   I  D ++RPRQ++DE+NG +A TR+++L+RE + + +   PVTGR+HQ+R+H  ++GHPI+G  LY TE    +++RLLLHA RLGF H
Sbjct:   44 DSVLLRMRAEYPDVAIVHRLDLDTSGLLVLSLSQRASSDLNRQFRERVIDKEYVALVDGLVAED--TGEVALPIASDPDNRPRQVIDEENGRSALTRFQVLTREDNCTRLQLVPVTGRSHQLRIHMAAVGHPILGCDLYATENAFQRADRLLLHAVRLGFCH 203

[Close]

BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2D5B3Y4_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B3Y4_9BACT)

HSP 1 Score: 158 bits (399), Expect = 1.120e-42
Identity = 80/162 (49.38%), Postives = 111/162 (68.52%), Query Frame = 2

Query:  680 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 1165
            DCL +R +  +P AR VHRLD+ TSGV+VMA   +  +ELSRQF +R   K Y AV+ GR+A     G + A +R DL+D PRQI+D++ G +A+T + ++ R  DR+ +  +PVTGR+HQ+R+H +S+GHPI+GD LY T E  + S RLLLHAT L   H
Sbjct:   53 DCLASRAEAAFPGARIVHRLDRDTSGVIVMARDADTHRELSRQFHDREVDKQYEAVVGGRLAVD--DGVIDAPMRKDLDDPPRQIIDDEQGRSAKTGFRVIERMDDRTRMELSPVTGRSHQLRVHMMSIGHPILGDDLYATPELLSMSRRLLLHATLLTITH 212

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G4R0_ECTSI	3.600e-141	67.22	Ribosomal large subunit pseudouridine synthase A n...	[more]
A0A1H9I0B1_9GAMM	4.770e-44	51.23	Pseudouridine synthase n=1 Tax=Amphritea atlantica...	[more]
A0A2Z4UKY3_9HYPH	2.490e-43	50.00	Ribosomal large subunit pseudouridine synthase A n...	[more]
A0A2E0XYT5_9BACT	3.900e-43	47.53	Pseudouridine synthase n=1 Tax=Phycisphaerae bacte...	[more]
A0A7W2BME3_9HYPH	4.170e-43	49.38	RNA pseudouridine synthase n=1 Tax=Hyphomicrobiale...	[more]
A0A6N0HZW1_9GAMM	4.590e-43	50.00	Pseudouridine synthase n=2 Tax=Gammaproteobacteria...	[more]
UPI001A8EBC93	6.080e-43	49.38	pseudouridine synthase n=1 Tax=Motiliproteus sp. S...	[more]
A0A1G3AV14_9BACT	7.330e-43	47.78	Pseudouridine synthase n=2 Tax=unclassified Planct...	[more]
A0A2E8J4A8_9GAMM	8.650e-43	46.30	Pseudouridine synthase n=1 Tax=Gammaproteobacteria...	[more]
A0A2D5B3Y4_9BACT	1.120e-42	49.38	RNA pseudouridine synthase n=1 Tax=Phycisphaerae b...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6672	contig	H-paniculata_contig6672:7069..12076 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	419.9
Seed ortholog evalue	1.2e-114
Seed eggNOG ortholog	2880.D7G4R0
Hectar predicted targeting category	other localisation
EggNOG free text desc.	pseudouridine synthase activity
EggNOG OGs	COG0564@1,KOG1919@2759
Ec32 ortholog description	Pseudouridine synthase, RsuA/RluB/C/D/E/F
Ec32 ortholog	Ec-20_000700.1
COG Functional cat.	J
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	8
Model size	1174
Cds size	1014
Stop	0
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930788.9491892-UTR-H-paniculata_contig6672:7068..7228	1622930788.9491892-UTR-H-paniculata_contig6672:7068..7228	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6672 7069..7228 +
1691481452.7872474-UTR-H-paniculata_contig6672:7068..7228	1691481452.7872474-UTR-H-paniculata_contig6672:7068..7228	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6672 7069..7228 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6672.14558.1	prot_H-paniculata_contig6672.14558.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig6672 7229..12076 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig6672:7069..12076+
coding sequence from alignment at H-paniculata_contig6672:7069..12076+

protein sequence of mRNA_H-paniculata_contig6672.14558.1

>prot_H-paniculata_contig6672.14558.1 ID=prot_H-paniculata_contig6672.14558.1|Name=mRNA_H-paniculata_contig6672.14558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=338bp
MSDVDESVGEVSQSSKTAGVRGSPSAQPEGTATAISSDLKVLYSDEDIVV
LDKPPGLRTVPGSIKSTEGSKSINRAQTEWHSGNKRSRQDFWIDVVHKAC
NSMLEDEQIAGNTELQGHLQRLTRENNVPRKRSKFANYAAVTLGLHGEEG
EAISSRIWNAVDSRLKVEAGPGTDCLLTRVKLRWPEARHVHRLDQGTSGV
MVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPD
LNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHAL
SLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVHVSL

mRNA from alignment at H-paniculata_contig6672:7069..12076+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig6672.14558.1 ID=mRNA_H-paniculata_contig6672.14558.1|Name=mRNA_H-paniculata_contig6672.14558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5008bp|location=Sequence derived from alignment at H-paniculata_contig6672:7069..12076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTCGCTTAGAAATATCATCCTACTTTGTGGTTCATCAAACACCACTACA
CTGTATTTCATCGCCACCCTCTGCCCTCTAATACTGTCCGTAGGAGTACA
CGCGAATATCTGAAAGGAGTGTTGCCTGCTGTCTGTACTGACTGAACGAC
ATCAAACAGAATGTCAGACGTCGATGAGAGTGTGGGAGAAGTATCTCAGT
CGAGTAAGACGGCTGGAGTTAGAGGTAGCCCTTCAGCGCAACCTGAAGGT
ACTGCTACTGCGATATCGAGTGACCTGAAGGTGTTGTACAGCGATGAAGA
TATAGTAGTGCTGGATAAGCCACCGGGATTGCGAACTGTACCCGGATCGA
TCAAATCCACGGAAGGATCTAAGTCCATCAACAGGGCTCAGGTATGTAAG
AGTCAGCATACCCATGTGTGTCTGTGGTACTCAGTAGTAGTGTAATAGTA
CCAAGACGTCACGCCATCTTGGTAGCCTAATGGTGAGGACTGGCGCTGCT
GGATGCGTTCAATTATCATGAACGTGACGGTTGAAGGTCCAATTTCCAGC
GGACATGGACACCGTTGTTATGTGCCATACGGAATGCAGGTGGCGAATTA
TTGTTGGAGACCTCGTGAGCCGGGGTGGCGGCCACACGGTTGAGTATAAG
GCATTTGGCATTCTCCGAAGGTGACTGTAGACAGGTATACTCGAAAGATA
CGCTTGGATTTCTTTAACCTGTGTGGCAGGAGACAGACACTCCCAACAAC
CGACTTCAAGAGAGATAAATTTACAAAACACCGACTACAGGGAGTTATAG
TAGCCTCTCGGCAGTACCTTGATCGGTCGTAGAAAATGAACGAACAGAGT
CGTGCTAGTCGCAACCCTTGTTTATATCACAAACACTTCGCACGTAGTGT
CTGCTGTGCTATCTTACCACAGTACTGGTGACAATAACAACAGGGCTGAA
GGATAACTCATACCCTCAAGTGTCACGAGCTATTTCGGAACAAAAAGTAC
GCCTGAAAGTCTCGTCAGGAATGAGAAGAGGGGGTACTCATGTTTCTCAT
GTCGTTTGTGTTAAACCATTGGCAAGGTGTCCTCGAGAGATCGTGTTGTA
TAGGGGGGCGGGAGGGATGCCCGTTTGGCTCTGGATTATAATCAAGAAAT
CTCCATTTGTGGCGAAGGTTGTGACCAATGACAGACGGTAATAGCGCATG
TGCTCTGTTCTGTGCTATGTGCTCTGTTTTGTGCTATGTGCTATCCGGGT
TTCGCTGTCATAGACCACATGATGTGTCTATGAGGAGCGGTCATACCATG
TCGATAGCACGCACCACTTGCCGTCCTCCCTGTGAAGTCAAGCGGCGTCG
GGCTAGGTTAATGCTACGGTGGGAAATCATGTGGGAAGCCCCAGTGATCA
CCCTTTTTATTATCGTGTGGTACCAAATACTTTTTTTGTTTCATCGCGCC
TGTCCTTCGCGTTTCCTCGACAATTCTCAGGTCCCCGATTTGTCATCTCG
TTTGCGTTGGGCGATTTGAGTATCGTTGACGTGTCGAATCGGTTTATGAC
GGAAGACTATTGGTCCTGCACAGCATGCCGTTTAATGATCATATATGAAT
TTATCAAGTGCTGCATTAATGTTACGCAGCAGAACCGTGCCAAGTTCGTA
TCTGCGGCGGCCTTTGCGGAGCATTTTCAACAGCGACATCTCCTTATCCA
TGCTGCATGTCATTGGGCATTCTGTCGGGAAAGAAACAGATGGTTTCTTT
CCTACTTTTTTCAGTAGGTCATATGTAGAGGTCATCTGCGTTTAGTGGCG
TCGAAGGCGTTAACCTGCAATTCTGATACTCATATATTCACGTGAATTAG
ATTGTGGAATTGTGCTTACGTAGACAAATAATAGTGTTCAGTGATGTATT
CTGTGCGTCTACTCTCCTCGGGTTGATTTGTTACTCGTACTTACTAACCC
ATGTTTTTCATCTTGGGTGTGTTGAATGCTGCGACCTGTTCCTCCATGAT
CGACGGGAGCTGACGCAGTCCAGAACGAGCGTAATGGCGAAAGAAGTTTC
GAACAGCCGTAACCTCACCGCATATCGTGAGTTCAAATACAATCAATTCA
CACTAAAATCCCTCGTCCAATCTCTGTATGTACACAGACGGAATGGCACT
CCGGGAACAAGCGCTCTCGACAGGACTTCTGGATAGGTAAGTCATTCAAC
AACAGAGAGGGTAAGGGGTTCCAGTTGGCATATAGTAGGGTGCAACAGAC
TGCGGAGGTGATGCTCTAGTTTTGCTTAAATAGGATTTGACGACGTCGTA
TGTGTCCCGCACAGTGCTATTATTTAGTTAGGTAGGTAATATATCTAAGT
TGCTTATGGGGGAGGGCAGCAAAACCGTCCCATTGGATATGGCGGGGAAA
TACATTACTGCACTATACGTGTCTTTTGCCATAAGCATGTTCGGATTCTA
ACACCTTACTCCCCCGATGCCTGGGCATCCGGGTCGTTCAACGATTCAGA
CGTCGTGCATAAGGCATGCAATTCCATGTTAGAGGACGAGCAAATAGCAG
GGAACACGGAGCTCCAAGGTCACTTGCAGCGGTTGACCAGGGAGAATAAC
GTACCGAGAAAGAGGTGAGTGTTCATGTTCATGACCTATTCCTTTGTATT
GTAGACAAAGAATATACTGTACCTTCGTTAATGCATCTGTTGGACTGTCA
CAAAATCCTCTATATCATGGCATATGTACTGCATGTGCCTCTCTTGTTGC
CAAAACCAAAACCAATATTATTTCAACGCCCGTGAGGATGAATAACGCTC
ACTATTACAACTCTACAACTCGATCGCACCCATGCACTCTTCATCGACTT
GAACGAACGCTCTCAGGAGCAAGTTCGCGAATTACGCAGCCGTGACACTT
GGGCTCCATGGCGAGGAAGGAGAGGCCATCTCGTCTCGCATCTGGAACGC
AGTCGACAGTCGGCTCAAAGTTGAGGCTGGGCCTGGCACCGATTGTCTGC
TTACACGCGTCAAATTGAGGTGCATCTCCAATGGAATAATTCCCTGTTTA
GTCTCCCCCGCCACAGTACGTTTTCCCACATGATATTCGTGTCGTGAGGC
GTGAGGCCGTGAGATTCATGAGTAAGAGCGGTGTTGACACCATGTGCTAC
CTGTTGCTCAGTCTCGAATCGGGTCTCACATCACATCCTTGAATTCGCGG
TATAGGGAGGTTACACGGCTCTGGGCTGGCAGCGACCCGGACTGGATTTG
CACGGCTGACCTCGAATGTCGACCCTCTGCTTCAATGTTTTCCACTATTC
CACAAAGGTGGCCGGAGGCACGACATGTGCATCGTCTGGACCAAGGTACA
TCAGGAGTGATGGTGATGGCGCTCACGCCAGAGGCAGCAAAGGAACTTTC
CCGACAATTCCGTGAGCGAGGTGGGATAATGCTAACACTATAAATAGGTT
GCTGGTGATGTCATAAACGTATCGCCGCCCTCCAGTGCGCGGGCAGGGAT
CCCCAAAGAGCGTGGTGCGAGCAGTCATTCACCCACCAACCGTCAAACTC
CAGGCGCGACTGATGGGAAACCACCGATCCATCGTTGCATTTCGTCCACC
GTCGCCGCAGTAACTTCGAAGACCTATATCGCTGTCTTAGAAGGAAGGAT
GGCTAAATCCCCCAAAAGCGGCACGGTGGTTGCAAAAATTAGGCCGGACC
TTAACGATCGTCCCCGACAGGTGTGTCAATCTTGGTGTTCAAATATCACA
CGGTTGAATGGTTAGACGTGTTGGGAGCGACAGCCGTCAAGCCCAGATGC
ACCTCTTCAACTAGACCAGAGCTTATGGCTTGCATACTACCATAGCCAGC
ATACCTGCAGAGATACGAACCAACCACGTCTCATGAGCGCAGTGTCTTAT
GTATCGACTACTCAATTCTAGAGTAGGATCACATTCTATCGATCGAAATG
CTTGTACAGGCAACGCTGGAGCTAGGTAAACTCCACTTCTGTCTTGTTTG
AATTGCAAATGGCCCCTAAGGCAGAGTATCAGTTGGCCGTTCAGTTAAAA
CCAACTGCATTATCCCGCACCTGAATATCATGACAGGAATTGTGAGTGTA
GTCGCCATGTGAACCCCATGCAATTAGCAGACTGCAAAAAATATGTTGTA
TATGGGTTCATACAGCGGGGTTTATTTACCATCTTGGGCGCCCTTTCTCA
TGTAGGGTTTTACTTGGATTAAGTATTGATTGCTGAGTCCTGGGAGCAGG
TTCAGCACCTGAATTTAGCGCACACGGCGCTCCGCTCTACCAGCGCAGTT
AAGTCAGAGCGTCTTCCAGTGGTCCTATGTAGCCCTGCCTACGCAAACCA
AGGTATATGTGTTCAGAGTCAGAGTTAGGGGCTGATTGGTCGGGTCGGGT
TGGGTTTGATTGGTTGGTGTGATGTGTAAATGGAAGAAGACGCCCGAGAT
GTGAACTGGCCTCGCATTCACCACTCTGGGAACATTGGCAGATAGTAGAC
GAGAAGAATGGAAATGCGGCGGAGACACGATGGGAGCTGTTGAGCAGAGA
GGCAGATCGCTCTGTGGTAAATTTCACGCCTGTCACGGGTCGAACACACC
AGGTATGTTGCGTCGGACGTATCTATCATCGTGCTGCCCGCCGTTTTCTG
ATTGGTCGAAAAGTTGCAGACACCTTTTCCCTTTCTCCCTAGTGGGTATC
GGCTTCGAGACTCAGCATTGCCAGTAGCGAACCCTCTATCCACGGAACGT
TCGTGCGGCTGCAATCCTGCCGTGACCATCATGTCACGACATTTTGCAGA
AGTTGGTGGCGTCGACGGTGTGGATGGGAGCTTTTGCAAACGCGAGAGAA
TCTGACGGCGTTTTTTCCCCCGACAGATTCGAATGCACGCGTTGAGCCTG
GGGCACCCGATCATGGGAGACTCCCTGTACGGCACGGAGGAAGGCAAGGC
AAAATCGGAGAGGCTCCTTCTTCACGCAACTCGACTGGGTTTTGTACATG
TGAGTCTT

Coding sequence (CDS) from alignment at H-paniculata_contig6672:7069..12076+

>mRNA_H-paniculata_contig6672.14558.1 ID=mRNA_H-paniculata_contig6672.14558.1|Name=mRNA_H-paniculata_contig6672.14558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2028bp|location=Sequence derived from alignment at H-paniculata_contig6672:7069..12076+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAGACGTCGATGAGAGTGTGGGAGAAGTATCTCAGTCGAGTAAGAC
GGCTGGAGTTAGAGGTAGCCCTTCAGCGCAACCTGAAGGTACTGCTACTG
CGATATCGAGTGACCTGAAGGTGTTGTACAGCGATGAAGATATAGTAGTG
CTGGATAAGCCACCGGGATTGCGAACTGTACCCGGATCGATCAAATCCAC
GGAAGGATCTAAGTCCATCAACAGGGCTCAGATGTCAGACGTCGATGAGA
GTGTGGGAGAAGTATCTCAGTCGAGTAAGACGGCTGGAGTTAGAGGTAGC
CCTTCAGCGCAACCTGAAGGTACTGCTACTGCGATATCGAGTGACCTGAA
GGTGTTGTACAGCGATGAAGATATAGTAGTGCTGGATAAGCCACCGGGAT
TGCGAACTGTACCCGGATCGATCAAATCCACGGAAGGATCTAAGTCCATC
AACAGGGCTCAGACGGAATGGCACTCCGGGAACAAGCGCTCTCGACAGGA
CTTCTGGATAGACGGAATGGCACTCCGGGAACAAGCGCTCTCGACAGGAC
TTCTGGATAGACGTCGTGCATAAGGCATGCAATTCCATGTTAGAGGACGA
GCAAATAGCAGGGAACACGGAGCTCCAAGGTCACTTGCAGCGGTTGACCA
GGGAGAATAACGTACCGAGAAAGAGACGTCGTGCATAAGGCATGCAATTC
CATGTTAGAGGACGAGCAAATAGCAGGGAACACGGAGCTCCAAGGTCACT
TGCAGCGGTTGACCAGGGAGAATAACGTACCGAGAAAGAGGAGCAAGTTC
GCGAATTACGCAGCCGTGACACTTGGGCTCCATGGCGAGGAAGGAGAGGC
CATCTCGTCTCGCATCTGGAACGCAGTCGACAGTCGGCTCAAAGTTGAGG
CTGGGCCTGGCACCGATTGTCTGCTTACACGCGTCAAATTGAGGAGCAAG
TTCGCGAATTACGCAGCCGTGACACTTGGGCTCCATGGCGAGGAAGGAGA
GGCCATCTCGTCTCGCATCTGGAACGCAGTCGACAGTCGGCTCAAAGTTG
AGGCTGGGCCTGGCACCGATTGTCTGCTTACACGCGTCAAATTGAGGTGG
CCGGAGGCACGACATGTGCATCGTCTGGACCAAGGTACATCAGGAGTGAT
GGTGATGGCGCTCACGCCAGAGGCAGCAAAGGAACTTTCCCGACAATTCC
GTGAGCGAGGTGGCCGGAGGCACGACATGTGCATCGTCTGGACCAAGGTA
CATCAGGAGTGATGGTGATGGCGCTCACGCCAGAGGCAGCAAAGGAACTT
TCCCGACAATTCCGTGAGCGAGTAACTTCGAAGACCTATATCGCTGTCTT
AGAAGGAAGGATGGCTAAATCCCCCAAAAGCGGCACGGTGGTTGCAAAAA
TTAGGCCGGACCTTAACGATCGTCCCCGACAGTAACTTCGAAGACCTATA
TCGCTGTCTTAGAAGGAAGGATGGCTAAATCCCCCAAAAGCGGCACGGTG
GTTGCAAAAATTAGGCCGGACCTTAACGATCGTCCCCGACAGATAGTAGA
CGAGAAGAATGGAAATGCGGCGGAGACACGATGGGAGCTGTTGAGCAGAG
AGGCAGATCGCTCTGTGGTAAATTTCACGCCTGTCACGGGTCGAACACAC
CAGATAGTAGACGAGAAGAATGGAAATGCGGCGGAGACACGATGGGAGCT
GTTGAGCAGAGAGGCAGATCGCTCTGTGGTAAATTTCACGCCTGTCACGG
GTCGAACACACCAGATTCGAATGCACGCGTTGAGCCTGGGGCACCCGATC
ATGGGAGACTCCCTGTACGGCACGGAGGAAGGCAAGGCAAAATCGGAGAG
GCTCCTTCTTCACGCAACTCGACTGGGTTTTGTACATGTGAGTCTTATTC
GAATGCACGCGTTGAGCCTGGGGCACCCGATCATGGGAGACTCCCTGTAC
GGCACGGAGGAAGGCAAGGCAAAATCGGAGAGGCTCCTTCTTCACGCAAC
TCGACTGGGTTTTGTACATGTGAGTCTT