prot_H-paniculata_contig6672.14558.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 4.990e-142 Identity = 201/299 (67.22%), Postives = 235/299 (78.60%), Query Frame = 0
Query: 37 SDLKVLYSDEDIVVLDKPPGLRTVPGSIKSTEGSKSINRAQTEWHSGNKRSRQDFWIDVVHKACNSMLEDEQIAGNTELQGHLQRLTRENNVPRKRSKFANYAAVTLGLHGEEGEAISSRIWNAVDSRLKVEAGPGTDCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
SD+ V++SD DIVVL+KP GLRTVPG E R EWHSG KR RQ+FW DVVH AC S+L DE+ G E + HL+RLT+ENNVPRKRSKF NY AVTLGL GEEG+ +S+R+W+ VD LK E GPG DCLLTRV+ RWPEARHVHRLDQ TSG++VMALT EAA+E+ RQFRERV SKTY AVLEGRMAK+PKSG V AK+RPD ++RP+Q+ E+ GN A T WE + R+ DR+ V+FTPVTGRTHQIRMHA+ LGHP+MGDSLYGT EG AKSERLLLHA R+ F H
Sbjct: 22 SDVDVIFSDPDIVVLNKPTGLRTVPGKAVGPEAE---TRVHVEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIRMHAVHLGHPVMGDSLYGTPEGTAKSERLLLHARRISFPH 317
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A1H9I0B1_9GAMM (Pseudouridine synthase n=1 Tax=Amphritea atlantica TaxID=355243 RepID=A0A1H9I0B1_9GAMM) HSP 1 Score: 161 bits (407), Expect = 1.230e-44 Identity = 83/162 (51.23%), Postives = 109/162 (67.28%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
DCL RV+ +P AR VHRLD TSGVMV+AL+ + + LS QF+ER T K+Y A++ GR+AK+ SGTV +R D +RP QI+D + G +A+T W L+ + D S V TP+TGR+HQ+R+H LGHPI+GD Y T +SERLLLHA L F H
Sbjct: 38 DCLWRRVQQHYPTARIVHRLDYATSGVMVLALSATSHRHLSIQFQERKTDKSYQAIVAGRLAKN--SGTVNQPLRCDWENRPLQIIDHQQGKSAQTHWRLIEQLDDASRVELTPITGRSHQLRVHMQFLGHPILGDRFYATPRQIERSERLLLHAHSLSFSH 197
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2Z4UKY3_9HYPH (Ribosomal large subunit pseudouridine synthase A n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UKY3_9HYPH) HSP 1 Score: 159 bits (403), Expect = 6.490e-44 Identity = 81/162 (50.00%), Postives = 110/162 (67.90%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
DCL TR ++ +P A VHRLD TSG++VMA+TP A + L QF +R T KTY A + G+M + GTVVA I D +RPRQ++D + G +AETRW++L REA S V P TGR+HQ+R+H LSLGHPI+GD++Y ++ ++RL LH+T L H
Sbjct: 48 DCLETRARIEFPTATIVHRLDMDTSGILVMAMTPNAHRHLGLQFEKRKTKKTYTARVWGKMTED--EGTVVAPIITDWPNRPRQMIDFEKGRSAETRWQVLDREAGASRVALYPHTGRSHQLRVHMLSLGHPILGDNIYAHDDAFNAADRLQLHSTSLTLHH 207
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2E0XYT5_9BACT (Pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E0XYT5_9BACT) HSP 1 Score: 159 bits (401), Expect = 1.020e-43 Identity = 77/162 (47.53%), Postives = 112/162 (69.14%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
DCL R + +P AR VHRLD+ TSG++VMA +A +ELSRQF++R K Y AV+ G +A GT+ A IR D+++ PRQ++D+ +G + T WE++ R+ DR+ + P+TGR+HQ+R+H LS+GHPI+GD LY E+ + + RL+LHAT LG H
Sbjct: 40 DCLAARAERAYPGARIVHRLDRDTSGLIVMARDADAHRELSRQFQDREVDKNYEAVVGGLVAID--EGTIDAPIRKDMDNPPRQLIDDVHGRPSVTHWEVIERQGDRTRLKLHPITGRSHQLRLHLLSIGHPILGDDLYAPEDLRDAATRLMLHATLLGLKH 199
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A7W2BME3_9HYPH (RNA pseudouridine synthase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W2BME3_9HYPH) HSP 1 Score: 159 bits (402), Expect = 1.090e-43 Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
DCL+TR+ R+P+AR VHRLD TSGVMV+A+ P A + L QF R KTYIA+++G +A SG V IR D +RPRQ++D G +A T W++L+RE DRS + P+TGR+HQ+R+H LGHPI+GD+LY E + RL LHA L H
Sbjct: 54 DCLITRLHKRYPQARIVHRLDLDTSGVMVIAMNPAAHRHLGLQFERRHVEKTYIALVDGNVAAD--SGRVDLPIRVDWPNRPRQMIDHAEGRSAVTDWQVLAREDDRSRIALRPLTGRSHQLRLHMRELGHPILGDTLYAPEAARKAMPRLCLHALNLSLYH 213
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A6N0HZW1_9GAMM (Pseudouridine synthase n=2 Tax=Gammaproteobacteria incertae sedis TaxID=118884 RepID=A0A6N0HZW1_9GAMM) HSP 1 Score: 158 bits (400), Expect = 1.200e-43 Identity = 82/164 (50.00%), Postives = 112/164 (68.29%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKS--GTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
DC+++R+ + +PEA VHRLD TSG+MV+A EA +ELSRQF++R K YI+++ G SP G++ +R D +RPRQ+VD K G AA T W +LSR+ DRS + TPVTGR+HQ+R+H LS+ +PI+GD LY EE + RL+LHAT L F H
Sbjct: 35 DCVVSRLAIDYPEALIVHRLDWETSGLMVLARNREAHRELSRQFQDREVEKQYISIVYG----SPPEDHGSIDLPLRCDWPNRPRQMVDHKQGKAALTHWRVLSRDNDRSRIELTPVTGRSHQLRVHLLSIDNPILGDQLYAHEEALQMANRLMLHATSLSFRH 194
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: UPI001A8EBC93 (pseudouridine synthase n=1 Tax=Motiliproteus sp. SC1-56 TaxID=2799565 RepID=UPI001A8EBC93) HSP 1 Score: 158 bits (399), Expect = 1.600e-43 Identity = 80/162 (49.38%), Postives = 110/162 (67.90%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
DCL RV+ ++P AR VHRLD TSGVMV+AL ++ + LSRQF+ER T K Y+ +++GR+ ++G V +R D ++RP Q+VD G AA T W +L R AD + + TP+TGR+HQ+R+H SLGHPI+GD+ Y +A S RLLLHA RL +H
Sbjct: 32 DCLWHRVQQQFPTARIVHRLDCATSGVMVLALNADSHRALSRQFQERQTDKRYVCIVDGRVV--AETGHVALPLRCDWDNRPLQMVDFAQGKAALTHWRVLERAADHTRLALTPITGRSHQLRVHMKSLGHPILGDAFYAPPRVQAVSPRLLLHAERLRLIH 191
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A1G3AV14_9BACT (Pseudouridine synthase n=2 Tax=unclassified Planctomycetes TaxID=473814 RepID=A0A1G3AV14_9BACT) HSP 1 Score: 158 bits (400), Expect = 1.920e-43 Identity = 86/180 (47.78%), Postives = 112/180 (62.22%), Query Frame = 0
Query: 161 VDSRLKVEAGPGT-----DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
VD + + PG DCL+ RV+ R+P+AR VHRLD TSG+MV+A PE+ +ELSRQF+ R T KTY+A + G SG V +R DL RP QI+D + G A+T W++L R D + TPVTGRTHQ+R+H +LGHPI+GD LY E A ++RL LHA L H
Sbjct: 31 VDKPANILSVPGRTPEKQDCLIHRVQKRFPKARIVHRLDFSTSGLMVIAQNPESHRELSRQFQNRETEKTYVAKVYG--CPDEPSGEVNLPLRCDLERRPLQIIDYQQGKTAQTFWQILERYEDSCRMELTPVTGRTHQLRVHMQALGHPILGDELYAHETAFAMADRLFLHAQELIITH 208
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2E8J4A8_9GAMM (Pseudouridine synthase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8J4A8_9GAMM) HSP 1 Score: 158 bits (399), Expect = 2.270e-43 Identity = 75/162 (46.30%), Postives = 117/162 (72.22%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
D +L R++ +P+ VHRLD TSG++V++L+ A+ +L+RQFRERV K Y+A+++G +A+ +G V I D ++RPRQ++DE+NG +A TR+++L+RE + + + PVTGR+HQ+R+H ++GHPI+G LY TE +++RLLLHA RLGF H
Sbjct: 44 DSVLLRMRAEYPDVAIVHRLDLDTSGLLVLSLSQRASSDLNRQFRERVIDKEYVALVDGLVAED--TGEVALPIASDPDNRPRQVIDEENGRSALTRFQVLTREDNCTRLQLVPVTGRSHQLRIHMAAVGHPILGCDLYATENAFQRADRLLLHAVRLGFCH 203
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Match: A0A2D5B3Y4_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B3Y4_9BACT) HSP 1 Score: 158 bits (399), Expect = 2.950e-43 Identity = 80/162 (49.38%), Postives = 111/162 (68.52%), Query Frame = 0
Query: 174 DCLLTRVKLRWPEARHVHRLDQGTSGVMVMALTPEAAKELSRQFRERVTSKTYIAVLEGRMAKSPKSGTVVAKIRPDLNDRPRQIVDEKNGNAAETRWELLSREADRSVVNFTPVTGRTHQIRMHALSLGHPIMGDSLYGTEEGKAKSERLLLHATRLGFVH 335
DCL +R + +P AR VHRLD+ TSGV+VMA + +ELSRQF +R K Y AV+ GR+A G + A +R DL+D PRQI+D++ G +A+T + ++ R DR+ + +PVTGR+HQ+R+H +S+GHPI+GD LY T E + S RLLLHAT L H
Sbjct: 53 DCLASRAEAAFPGARIVHRLDRDTSGVIVMARDADTHRELSRQFHDREVDKQYEAVVGGRLAVD--DGVIDAPMRKDLDDPPRQIIDDEQGRSAKTGFRVIERMDDRTRMELSPVTGRSHQLRVHMMSIGHPILGDDLYATPELLSMSRRLLLHATLLTITH 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6672.14558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig6672.14558.1 ID=prot_H-paniculata_contig6672.14558.1|Name=mRNA_H-paniculata_contig6672.14558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=338bpback to top |