mRNA_H-paniculata_contig6603.14479.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI) HSP 1 Score: 224 bits (570), Expect = 9.890e-67 Identity = 109/130 (83.85%), Postives = 119/130 (91.54%), Query Frame = 1
Query: 1 MHDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
MHDPN LA+FAS+ PYHADALLQL MVFAHTGQMDRASEFVGR LYVLESA M+ FRP++GA RLDA+LEVN+TY AAMFRHMQM+GM+GGARTALEVGRLLLSLDPLGDPMGCLLALD+H L SRQG F
Sbjct: 293 MHDPNFLASFASRAPYHADALLQLGMVFAHTGQMDRASEFVGRSLYVLESATMEAFRPVDGACRLDATLEVNKTYFAAMFRHMQMAGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSHALTSRQGGF 422
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE) HSP 1 Score: 219 bits (559), Expect = 1.040e-66 Identity = 110/132 (83.33%), Postives = 120/132 (90.91%), Query Frame = 1
Query: 1 MHDPNLLAAFASQVPYHADALLQLAMVFAHTGQ--MDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
MHDPN LA+FAS+ PYHADALLQL MVFAHTGQ MDRASEFVGR LYVLESA M+ FRP++GA RLDA+LEVN+TY AAMFRHMQM+GM+GGARTALEV RLLLSLDPLGDPMGCLLALD+H LASRQGEF
Sbjct: 89 MHDPNFLASFASRAPYHADALLQLGMVFAHTGQASMDRASEFVGRSLYVLESATMEAFRPVDGACRLDATLEVNKTYFAAMFRHMQMAGMVGGARTALEVCRLLLSLDPLGDPMGCLLALDSHALASRQGEF 220
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: A0A835ZGE8_9STRA (Transcriptional repressor TCF25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE8_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.060e-39 Identity = 74/128 (57.81%), Postives = 89/128 (69.53%), Query Frame = 1
Query: 7 DPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
DPN +A Q P+HADALLQL MV+AHTGQMD ASEFV RCLYVLE A ++ + +G R+D + N T A+FRH Q MMG RTA+EV LLLSLDP+GDPMG LL +D H LA ++G F
Sbjct: 297 DPNNVALLLWQAPHHADALLQLGMVYAHTGQMDHASEFVRRCLYVLECAVLEPCKLASGRVRMDVTHPPNATLFGALFRHAQQCSMMGCRRTAMEVSHLLLSLDPIGDPMGALLCVDCHALACKEGRF 424
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: A0A2D4CKE4_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CKE4_PYTIN) HSP 1 Score: 120 bits (300), Expect = 1.990e-31 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 4 HDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
HDPNL++ F + P+H DALLQ++ VF H GQMD AS+ + RC+YVLE A D F G R+D + E N + A+F + G G R+A E +LLL LDP GDPM LLA+D + +++RQ +F
Sbjct: 17 HDPNLISHFLHRYPFHIDALLQMSEVFQHHGQMDHASDCIKRCMYVLELAWADQFDVTKGNCRMDVNTEHNDGFFKALFLLTKQVGRRGCMRSAFETAKLLLGLDPQGDPMNVLLAIDYYAISARQYDF 145
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: A0A024GI90_9STRA (Uncharacterized protein n=7 Tax=Albugo candida TaxID=65357 RepID=A0A024GI90_9STRA) HSP 1 Score: 125 bits (313), Expect = 9.820e-31 Identity = 60/129 (46.51%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 4 HDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
HDP LA F + PYH DAL+Q++ V+ H GQMD A++ + RC+YV E + + F NG SR+D +E N T+ A+F +MQ +G G R+A E+ R++ +LDP GDP+ +LALD + LASRQ F
Sbjct: 358 HDPQALAEFLYRNPYHLDALIQMSRVYQHHGQMDHATDCIKRCMYVCELSWSENFDVSNGNSRMDYRIETNATFYKALFMYMQQAGRRGCMRSAFELARMIFALDPHGDPVSVVLALDYYALASRQYAF 486
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: A0A5D6XJL8_9STRA (EDR2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJL8_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.450e-30 Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 4 HDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
HDPN++ F + PYH DALLQ++ VF H GQMD A++ + RC+Y LE A D F G R+D S E N + A+F M+ G G R+A E +LLL LDPLGDPM LLA+D + L SRQ +F
Sbjct: 457 HDPNIMGHFLQRYPYHIDALLQMSEVFQHHGQMDHAADCIKRCMYALELAWADQFDVARGECRMDISTEHNAGFFRALFLLMKQVGRRGCMRSAFETAKLLLGLDPLGDPMHVLLAVDYYALTSRQCQF 585
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: W2QZ72_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=W2QZ72_PHYPN) HSP 1 Score: 124 bits (311), Expect = 1.480e-30 Identity = 64/129 (49.61%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 4 HDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
HDPNL+A F + PYH DALL ++ VF H GQMD A++ + RC+YVLE A D F G R+D E N + A+F M+ G G R+A E +LLLSLDP GDPM LLA+D + L SRQ +F
Sbjct: 243 HDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQF 371
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: G4YZT6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT6_PHYSP) HSP 1 Score: 124 bits (312), Expect = 1.480e-30 Identity = 65/129 (50.39%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 4 HDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
HDPNL+A F + PYH DALL ++ VF H GQMD AS+ + RC+YVLE A D F G R+D E N + A+F M+ G G R+A E +LLLSLDP GDPM LLA+D + L SRQ F
Sbjct: 722 HDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHASDCIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNAGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCRF 850
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: A0A6G0PRE5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PRE5_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.670e-30 Identity = 64/129 (49.61%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 4 HDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
HDPNL+A F + PYH DALL ++ VF H GQMD A++ + RC+YVLE A D F G R+D E N + A+F M+ G G R+A E +LLLSLDP GDPM LLA+D + L SRQ +F
Sbjct: 281 HDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDSIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNAGFFKALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQF 409
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Match: V9EAW3_PHYPR (EDR2_C domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EAW3_PHYPR) HSP 1 Score: 124 bits (311), Expect = 1.990e-30 Identity = 64/129 (49.61%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 4 HDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESACMDGFRPINGASRLDASLEVNRTYLAAMFRHMQMSGMMGGARTALEVGRLLLSLDPLGDPMGCLLALDTHVLASRQGEF 390
HDPNL+A F + PYH DALL ++ VF H GQMD A++ + RC+YVLE A D F G R+D E N + A+F M+ G G R+A E +LLLSLDP GDPM LLA+D + L SRQ +F
Sbjct: 496 HDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQFDVSKGNCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQF 624 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6603.14479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6603.14479.1 >prot_H-paniculata_contig6603.14479.1 ID=prot_H-paniculata_contig6603.14479.1|Name=mRNA_H-paniculata_contig6603.14479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp MHDPNLLAAFASQVPYHADALLQLAMVFAHTGQMDRASEFVGRCLYVLESback to top mRNA from alignment at H-paniculata_contig6603:9806..11617- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6603.14479.1 ID=mRNA_H-paniculata_contig6603.14479.1|Name=mRNA_H-paniculata_contig6603.14479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1812bp|location=Sequence derived from alignment at H-paniculata_contig6603:9806..11617- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6603:9806..11617- >mRNA_H-paniculata_contig6603.14479.1 ID=mRNA_H-paniculata_contig6603.14479.1|Name=mRNA_H-paniculata_contig6603.14479.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig6603:9806..11617- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |