mRNA_H-paniculata_contig6603.14478.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6603.14478.1
Unique NamemRNA_H-paniculata_contig6603.14478.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 5.000e-84
Identity = 155/256 (60.55%), Postives = 178/256 (69.53%), Query Frame = 1 
Query:  169 VTVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTSSNISEPETEVLARAYGPKSPIHKYLDLPVSEFVDESFALLPQDANILDPRLMGPNFMNERVRFRLPDGA---GGGNXXXXXGAGI-DELL 924
            VTVQDLPGLS+SV LA LDT+GD +AAREAMAS LLRFP+MLEPLLEKCG++PRSTTYP +WKSVMQHPHFG+A  RLP GHVL HLA IFA RG ++WKHERA+ELLYDGAGIALQGL    ++     + +  A     +  PS+                         E EV+ RAYG  SPI KYLDL +S+F DESFALLPQDANILDPRLMGPNFMNERVR R+P G    GGG      G  + DE+L
Sbjct:  254 VTVQDLPGLSMSVCLATLDTTGDSTAAREAMASTLLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRAKDRLPAGHVLLHLARIFAQRGGELWKHERAEELLYDGAGIALQGLPSTPATREAAGAGAEEAGIIYADFCPSAA------------------------EVEVVQRAYGEGSPIQKYLDLALSDF-DESFALLPQDANILDPRLMGPNFMNERVRLRVPPGVVPGGGGERGWGGGQEVLDEVL 484
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 1.050e-80
Identity = 157/256 (61.33%), Postives = 178/256 (69.53%), Query Frame = 1 
Query:  169 VTVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTSSNISEPETEVLARAYGPKSPIHKYLDLPVSEFVDESFALLPQDANILDPRLMGPNFMNERVRFRLPDGA---GGGNXXXXXGAGI-DELL 924
            VTVQDLPGLS+SV LA LDT+GD +AAREAMAS +LRFP+MLEPLLEKCG++PRSTTYP +WKSVMQHPHFG+A  RLP GHVL HLA IFA RG ++WKHERA+ELLYDGAGIALQGL         +T A+  AA                       G+       S  E EV+ RAYG  SPI KYLDL +S+F DESFALLPQDANILDPRLMGPNFMNERVR R+P G    GGG      G  + DE+L
Sbjct:  456 VTVQDLPGLSMSVCLATLDTTGDSTAAREAMASTMLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRAKDRLPAGHVLLHLARIFAQRGGELWKHERAEELLYDGAGIALQGLP--------STPATREAAGXXXXX----------XXXXXXAGTIGADFCPSAAEVEVVQRAYGEGSPIQKYLDLSLSDF-DESFALLPQDANILDPRLMGPNFMNERVRLRVPPGVVPGGGGERGWGGGQEVLDEVL 692
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A835ZGE8_9STRA (Transcriptional repressor TCF25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE8_9STRA)

HSP 1 Score: 114 bits (286), Expect = 9.970e-25
Identity = 91/242 (37.60%), Postives = 114/242 (47.11%), Query Frame = 1 
Query:  163 PDVTVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLS-PRSTTYPQNWKSVMQHPHFGQANTRLPR-------GHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTSSNISEPETEVLARAYGPK-SPIHKYLDLPVSEFVDES-FALLPQDANILDPRLMGPNFMNERVRFR 858
            P VTV DLPGL++S  LA LD +GD +AAR A   AL RFP  LEPLL   G    R+  +P +WKSV +  HFG A              H L HL +I+A+R  ++W+ +  QELLYDGAG+ALQG                                                    E E EVLARAY  K SP+ KYL L  ++F D + +  LP D NIL+P L  P  +    R R
Sbjct:  483 PLVTVADLPGLALSAALAHLD-AGDAAAARAAARRALRRFPAALEPLLAAAGAPHARTQAHPVDWKSVFRSAHFGGAXXXXXXXXXXXXVAHPLAHLCAIYAARAGELWRRDDTQELLYDGAGLALQGAGGXXXXXXXXXXXXXXXX-----------------------XDAGADDACCEEEREVLARAYRLKDSPLLKYLALSPADFSDAAAYQQLPHDVNILNPALAAPQMLPPGRRLR 700
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A4D9DDK5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDK5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 7.000e-12
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = 1 
Query:  166 DVTVQDLPGLSVSVGLA--MLDTSGDVSAAREAMASALLRFPVMLEPLLEKCG--LSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGA 504
            D TV +LP +  S  LA  +   + +   +++ +  AL RFP++L+PL+EKC   L  R T   Q W  ++ HP F +A  RLP G +L  L S++  R Y++W H    + LYDGA
Sbjct:  392 DWTVLELPNICFSCSLAQKLSAKAEEQLKSKDDLQEALRRFPLVLQPLVEKCRNELGSRIT---QEWGPILCHPFFARAEARLPPGCILPRLVSVYVQRSYNLWVHPEDMQFLYDGA 505
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: G4YZT6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT6_PHYSP)

HSP 1 Score: 72.0 bits (175), Expect = 2.920e-10
Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 1 
Query:  166 DVTVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 537
            D T+  LP L +S+ LA     G+ + A++ +A+ALL+FP ML+PLLEK  ++P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L  GA  AL    +V+
Sbjct:  884 DETIAALPNLQISLALAHFFL-GNETEAKDLLAAALLKFPTMLKPLLEKIAVNPSSSS----WQPILSSRVFANARSVDGEHSVLQHLLDIYVTRNHSIWKVNDAQSFLLQGAQHALASPALVS 1002
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A6G0PRE5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PRE5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.010e-8
Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 1 
Query:  166 DVTVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 537
            D T+  LP L  S+ LA     G+ + A++ +A+ALL+FP ML+P LEK   +P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L   A  AL    +V+
Sbjct:  443 DETIAALPNLQFSLALAHFFL-GNETEAKDLLAAALLKFPTMLKPFLEKIAANPSSSS----WQPILSSRVFANARSVEGEHSVLQHLLDIYVTRNHSIWKVNAAQSFLLKSAQHALASPALVS 561
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: K3WYM9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYM9_GLOUD)

HSP 1 Score: 65.9 bits (159), Expect = 2.620e-8
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 1 
Query:  166 DVTVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIAL 516
            D  +  LP L  S+ LA     G+   A+E +A ALLRFP +L+PLLEK  ++  S T    WK ++    F  A T    G ++ HL +I+ SR + +WK    Q  L  GA  AL
Sbjct:  402 DGMISSLPNLQFSLALAHF-FMGNADEAKELLAKALLRFPTVLKPLLEKIAVNTSSPT----WKPILSSRVFANAKTLNDDG-LIDHLLAIYVSRNHTLWKVNDVQNFLLRGAQHAL 512
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: W2QZ72_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=W2QZ72_PHYPN)

HSP 1 Score: 64.7 bits (156), Expect = 6.280e-8
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1 
Query:  172 TVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 537
            ++  LP L  S+ LA     G+ S A+E +A+ALL+FP +L+PLLEK   +P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L   A  AL    +V+
Sbjct:  405 SIAALPNLQFSLALAHFFV-GNESEAKEKLATALLKFPTILKPLLEKIAANPSSSS----WQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWKVNDAQSFLLRSAKHALASPALVS 521
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: V9EAW3_PHYPR (EDR2_C domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EAW3_PHYPR)

HSP 1 Score: 64.3 bits (155), Expect = 9.480e-8
Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 1 
Query:  172 TVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIALQGLVMVN 537
            ++  LP L  S+ LA     G+ S A+E +A+ALL+FP +L+PLLEK   +P S++    W+ ++    F  A +      VL HL  I+ +R + IWK   AQ  L   A  AL    +V+
Sbjct:  658 SIAALPNLQFSLALAHFFL-GNESEAKEKLATALLKFPTILKPLLEKIAANPSSSS----WQPILSSRVFANARSVDGEQSVLQHLLDIYVTRNHSIWKVNDAQSFLLRSAKHALASPALVS 774
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BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Match: A0A5D6XJL8_9STRA (EDR2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJL8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.250e-7
Identity = 48/128 (37.50%), Postives = 65/128 (50.78%), Query Frame = 1 
Query:  139 VTVAFSVRPD--VTVQDLPGLSVSVGLAMLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVMQHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIAL 516
            V  A + R D   +V  LP L  S+ LA     G+  AA+E +A ALL+FP +L+PLLEK   +  S T    WK V+    F  A      G ++ HL SI+ +R + +WK    Q LL   A  AL
Sbjct:  615 VVKAGTTRSDKAASVSALPNLQFSLALAHF-FMGNADAAKEQLAKALLQFPSVLKPLLEKISANTSSAT----WKPVLASRVFANAKALADDG-LIAHLLSIYVTRNHTLWKVNDVQNLLLRAAQHAL 736
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6603.14478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LA68_9PHAE5.000e-8460.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK35_ECTSI1.050e-8061.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGE8_9STRA9.970e-2537.60Transcriptional repressor TCF25-domain-containing ... [more]
A0A4D9DDK5_9STRA7.000e-1237.61Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
G4YZT6_PHYSP2.920e-1036.29Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6G0PRE5_9STRA2.010e-834.68Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
K3WYM9_GLOUD2.620e-837.61Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W2QZ72_PHYPN6.280e-835.25Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
V9EAW3_PHYPR9.480e-835.25EDR2_C domain-containing protein n=6 Tax=Phytophth... [more]
A0A5D6XJL8_9STRA2.250e-737.50EDR2_C domain-containing protein n=1 Tax=Pythium b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6603contigH-paniculata_contig6603:5371..8423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.5
Seed ortholog evalue3.8e-64
Seed eggNOG ortholog2880.D7FK35
Preferred nameTCF25
KEGG koko:K14206
KEGG TC2.A.17.4.1,2.A.17.4.2
KEGG Pathwayko04974,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006412,GO:0006414,GO:0006417,GO:0006508,GO:0006511,GO:0006518,GO:0006807,GO:0007275,GO:0007507,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0043043,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0045892,GO:0045934,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0072359,GO:0080090,GO:0140110,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990112,GO:1990116,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.ribosome-associated ubiquitin-dependent protein catabolic process
EggNOG OGsKOG2422@1,KOG2422@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons4
Model size924
Cds size708
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6603.14478.1prot_H-paniculata_contig6603.14478.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6603 5371..8207 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930778.9827561-CDS-H-paniculata_contig6603:5370..57891622930778.9827561-CDS-H-paniculata_contig6603:5370..5789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 5371..5789 -
1691481448.3639088-CDS-H-paniculata_contig6603:5370..57891691481448.3639088-CDS-H-paniculata_contig6603:5370..5789Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 5371..5789 -
1622930778.9972005-CDS-H-paniculata_contig6603:6840..69111622930778.9972005-CDS-H-paniculata_contig6603:6840..6911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 6841..6911 -
1691481448.3764262-CDS-H-paniculata_contig6603:6840..69111691481448.3764262-CDS-H-paniculata_contig6603:6840..6911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 6841..6911 -
1622930779.0121748-CDS-H-paniculata_contig6603:7630..77531622930779.0121748-CDS-H-paniculata_contig6603:7630..7753Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 7631..7753 -
1691481448.3912954-CDS-H-paniculata_contig6603:7630..77531691481448.3912954-CDS-H-paniculata_contig6603:7630..7753Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 7631..7753 -
1622930779.027962-CDS-H-paniculata_contig6603:8112..82071622930779.027962-CDS-H-paniculata_contig6603:8112..8207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 8113..8207 -
1691481448.4026058-CDS-H-paniculata_contig6603:8112..82071691481448.4026058-CDS-H-paniculata_contig6603:8112..8207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6603 8113..8207 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930779.0442636-UTR-H-paniculata_contig6603:8207..84231622930779.0442636-UTR-H-paniculata_contig6603:8207..8423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6603 8208..8423 -
1691481448.4143612-UTR-H-paniculata_contig6603:8207..84231691481448.4143612-UTR-H-paniculata_contig6603:8207..8423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6603 8208..8423 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6603.14478.1

>prot_H-paniculata_contig6603.14478.1 ID=prot_H-paniculata_contig6603.14478.1|Name=mRNA_H-paniculata_contig6603.14478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MLDTSGDVSAAREAMASALLRFPVMLEPLLEKCGLSPRSTTYPQNWKSVM
QHPHFGQANTRLPRGHVLFHLASIFASRGYDIWKHERAQELLYDGAGIAL
QGLVMVNSSSRGNTSASSSAATPIENTTPSSQPQQSTIESPDEPGSKSTS
SNISEPETEVLARAYGPKSPIHKYLDLPVSEFVDESFALLPQDANILDPR
LMGPNFMNERVRFRLPDGAGGGNGGGRGGAGIDELL
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mRNA from alignment at H-paniculata_contig6603:5371..8423-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6603.14478.1 ID=mRNA_H-paniculata_contig6603.14478.1|Name=mRNA_H-paniculata_contig6603.14478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3053bp|location=Sequence derived from alignment at H-paniculata_contig6603:5371..8423- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGCTCGTCACCTCGCCCTACTAAAATTGGTTGTTCCCATGTGCGTTGCG
ACAATTCTTCCAGGGATCGCACAGTCAATGCTATTATCTTTCACCGCGCG
TGTCGCCAAGATCCCTCCCGCCCCGCTCTCTCCTGCCTGTTACCGTAGCG
TTTAGTGTCCGTCCTGATGTTACGGTCCAAGACCTCCCCGGCTTAAGCGT
ATCGGTAGGGCTTGCGATGCTCGACACATCTGGTGATGTCTCAGCTGCCC
GAGAAGCGATGGCCTCCGCTTTGCTGCGGTTTCCTGTCATGCTCGAGCCT
CTCTTGGAAAAGTGAGTGGGATCGGGGAAAGAGGAATGGATGTTTATGTC
GTGTAACTGCTGTACATCTATGGGCATCGCCGCAGGTAACGTGGGTATTA
CGTTCAGAAATCGCTCTGATGGGAGCAAAGTTCCATCCTCTCGATGTCGC
GTAGTCAATCCTCTAACAAGTACGGCATGTAAAACATGAGCACCCTCCAT
CCCCGTCGCCCCCTTTCCCTTCCACAAGGGTGCAAACAATTCGTTGTCGA
TTAACTCTCCACCAATTTCAGGGTGTAGGTGCCAACCATAACGGCTTTTG
GAGTTGGAATAGCTCTGTAAAACTTTCGAACGCTTTGTTTTCCATCTGTT
GCGCCGTTTTATTTGTGCAGATGTGGGCTATCTCCGAGGTCGACGACATA
TCCTCAAAACTGGAAGTCGGTGATGCAGCACCCGCACTTTGGACAGGCCA
ACACTAGACTTCCCCGGGGGCATGTGCTTTTTCATCTGGCCAGGTAAGGA
GCACACGTTTCTGCTAAGGTTAGTTTCGTTCGGTGTCTGTTTGGTAACCT
GTTGTACCGCTCATACATACGACTCAGCTGCGATACAGAACACGACCGCG
GCTTGGCTTGGATGAAGTGACTGCATTGGGTCAAGTGCAGTTGTCTTTGG
CAGGGCATTGAAGAAAAGCTGTCATACGTGTTGCGTCTTGGTCCGGTCGA
TCCCTGGTTCACCCTGCAGCTGTGATACGGTCGCTTACCATCTGCCTTGT
TTTTGAACCGTTGGAGGTGGCCGTACGGCTACGCCCGTGCACCGAATGTT
TATCACCATTCCCATGTAATCATGAGCCACACACGACAACTTGCTACATT
CGCAAGAACTTTCTTGACCCACAGTTTGGATATTCCACAGCATGCGTTAC
AGCTGTTGTATAAAGAAGAAAATATTCCGAATTTTGTCATTGCTCACCAT
GACGACAGGTGGGGATTCGGCTTGCCCTTATACCCACAACCTTGAGCCTT
GCACTTGTCCAATCATAGAATCGAGTAGCGTTTTCGAAAGACCCTACAAA
ATACAGTGTGATACAGTGACGGTGTACGGGAGTAGAGAGCGAATCACAGC
AATATTGAACGCACATGTATTTATGCATGCATGTCCCATTAGATTTCTTG
ATTGTCTCGTCTTTTTCCCCCCGCGTTTGCCGGCCTTTTTAACTAATCTT
GTTCATGTGCAGTATTTTCGCATCAAGAGGGTATGACATATGGAAGCATG
AGAGGGCGCAAGAGCTTCTCTACGATGGGGCAGGTCAGACATGTTGCCCT
AATCCCTCCTCTTTTTGTTCTTGTCGCTAGAACACTGTTTTCTCTTTGTT
ATCCTCTATCACCGTTTGGCCGCTCACCCGGGCTAGAGCAAAGATCGACA
GCCAAGACCTAACGATTGGCGCTTGACCACAGAGTGAATTCCGCCGCTCG
ATCGTAAACATGTGTGCGCGTCGACCTCACTCGCCTGCGAAAGCCCAAAA
TATTGGAAACCATTGCAACAATCAGGTGATGTAGATGAACTCCACCCGGA
ATCGCGGAATCTCCAATCGGGAAATGGATAGGAAATTGCGTTGAGGAAAT
GGCTCATTTCCTAAATTCAAACGCCGATCAATTTCTGGAAATGGAAATTG
GTAGATGAGAATTTCGGGAAGTCGGGAGCTGCCAAGCCGTGCTCTGCTGG
TTGCTGGTCTTTTGTCAATCCCAAATCCGAGGAGTGCTGTCTCTCGTGAG
CTGGTGACAAAGCCACCCACATCTCGAGTGACAGCGCAGGCTGGTACATG
ACACACTGTAGGGACGAAGTATGGCTCGCGAATTGGTCCGGAGACAAATT
TCCTCTCGACTGACTGAAGCGTGAGAGGAGAAGGTGAAGATCGATGAAAA
CGGCGAAATTGTTGCGATTGTAGGAGAAAGACAACGGTATAAACGATTTA
GCACACGCACCCGGGTGACAGGGCATTTCGGTATTTTGCTGTTTATATCT
GCAAAAGCAGGAATACCTTCTGCTAATAGTAGATGATGTGAGCATTGCCG
AGTTTTGAATTTTTATTCGGTGGAGAATGGCTCCGTAATAATGATCCGTC
AACAACCTTGATAGTTGCCTCTGTAAACTTGACTTGGTCGCTATGGAGGC
GTTTGTGTTTGACCTCGTGTTTACAGGAATACTAGCCCCCTTCTTTGACT
TCGTAAATCTTGAATCTTCTGAACCATATCCCATGGAACTCCCAAAAAAT
TAGTTCTCTAAGCTGTGACCCGCGCCCGTCCACTTCTCTCCCTGCCCCTT
CTCCCCTTCGCCGCTTATTTCTTCTCCGGCACAGGGATCGCTCTCCAAGG
CCTCGTCATGGTCAACTCCTCAAGTAGAGGCAACACCTCAGCTTCCTCCT
CGGCAGCCACGCCAATAGAAAACACGACACCATCATCACAACCACAGCAA
TCAACGATAGAATCGCCTGATGAGCCAGGCAGCAAAAGCACGTCAAGCAA
CATCAGCGAGCCGGAAACGGAGGTCTTGGCCCGCGCTTACGGCCCGAAAT
CCCCCATTCACAAATATCTCGATCTACCCGTGTCCGAATTCGTCGACGAA
AGCTTCGCGCTGCTCCCCCAGGACGCCAATATCTTGGACCCGCGGCTGAT
GGGTCCGAACTTTATGAACGAGCGGGTGCGATTTCGTTTGCCCGACGGGG
CAGGGGGCGGCAACGGAGGGGGTCGTGGTGGGGCGGGTATAGATGAGTTG
TTG
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Coding sequence (CDS) from alignment at H-paniculata_contig6603:5371..8423-

>mRNA_H-paniculata_contig6603.14478.1 ID=mRNA_H-paniculata_contig6603.14478.1|Name=mRNA_H-paniculata_contig6603.14478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at H-paniculata_contig6603:5371..8423- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCGACACATCTGGTGATGTCTCAGCTGCCCGAGAAGCGATGGCCTC
CGCTTTGCTGCGGTTTCCTGTCATGCTCGAGCCTCTCTTGGAAAAATGCT
CGACACATCTGGTGATGTCTCAGCTGCCCGAGAAGCGATGGCCTCCGCTT
TGCTGCGGTTTCCTGTCATGCTCGAGCCTCTCTTGGAAAAATGTGGGCTA
TCTCCGAGGTCGACGACATATCCTCAAAACTGGAAGTCGGTGATGCAGCA
CCCGCACTTTGGACAGGCCAACACTAGACTTCCCCGGGGGCATGTGCTTT
TTCATCTGGCCAGATGTGGGCTATCTCCGAGGTCGACGACATATCCTCAA
AACTGGAAGTCGGTGATGCAGCACCCGCACTTTGGACAGGCCAACACTAG
ACTTCCCCGGGGGCATGTGCTTTTTCATCTGGCCAGTATTTTCGCATCAA
GAGGGTATGACATATGGAAGCATGAGAGGGCGCAAGAGCTTCTCTACGAT
GGGGCAGTATTTTCGCATCAAGAGGGTATGACATATGGAAGCATGAGAGG
GCGCAAGAGCTTCTCTACGATGGGGCAGGGATCGCTCTCCAAGGCCTCGT
CATGGTCAACTCCTCAAGTAGAGGCAACACCTCAGCTTCCTCCTCGGCAG
CCACGCCAATAGAAAACACGACACCATCATCACAACCACAGCAATCAACG
ATAGAATCGCCTGATGAGCCAGGCAGCAAAAGCACGTCAAGCAACATCAG
CGAGCCGGAAACGGAGGTCTTGGCCCGCGCTTACGGCCCGAAATCCCCCA
TTCACAAATATCTCGATCTACCCGTGTCCGAATTCGTCGACGAAAGCTTC
GCGCTGCTCCCCCAGGACGCCAATATCTTGGACCCGCGGCTGATGGGTCC
GAACTTTATGAACGAGCGGGTGCGATTTCGTTTGCCCGACGGGGCAGGGG
GCGGCAACGGAGGGGGTCGTGGTGGGGCGGGTATAGATGAGTTGTTGGGA
TCGCTCTCCAAGGCCTCGTCATGGTCAACTCCTCAAGTAGAGGCAACACC
TCAGCTTCCTCCTCGGCAGCCACGCCAATAGAAAACACGACACCATCATC
ACAACCACAGCAATCAACGATAGAATCGCCTGATGAGCCAGGCAGCAAAA
GCACGTCAAGCAACATCAGCGAGCCGGAAACGGAGGTCTTGGCCCGCGCT
TACGGCCCGAAATCCCCCATTCACAAATATCTCGATCTACCCGTGTCCGA
ATTCGTCGACGAAAGCTTCGCGCTGCTCCCCCAGGACGCCAATATCTTGG
ACCCGCGGCTGATGGGTCCGAACTTTATGAACGAGCGGGTGCGATTTCGT
TTGCCCGACGGGGCAGGGGGCGGCAACGGAGGGGGTCGTGGTGGGGCGGG
TATAGATGAGTTGTTG
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